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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GDI1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
91.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
202.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
169.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
159.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
156.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
152.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
147.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
147.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
143.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
139.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
129.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
127.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
127.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
124.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
122.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
117.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
114.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
113.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
112.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
112.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
109.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
106.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
101.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
96.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
95.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
95.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
94.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
93.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
92.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
90.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
88.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
86.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
85.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
84.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
79.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
78.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
75.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
74.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
74.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
72.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
72.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
72.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
71.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
70.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
69.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
68.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
67.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
66.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
66.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
64.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
60.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
57.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
57.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
56.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
56.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
55.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
52.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
50.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
49.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
48.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
48.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
46.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
39.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
37.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GDI1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
78.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
181.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
163.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
159.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
151.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
148.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
146.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
138.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
130.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
129.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
126.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
125.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
124.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
123.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
122.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
121.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
121.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
120.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
119.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
119.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
117.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
117.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
117.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
117.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
116.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
116.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
115.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
114.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
114.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
114.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
113.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
113.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
112.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
112.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
111.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
111.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
110.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
110.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
109.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
109.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
109.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
108.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
108.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
108.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
108.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
108.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
108.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
107.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
107.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
107.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
107.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
107.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
106.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
106.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
106.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
105.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
105.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
105.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
104.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
104.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
103.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
103.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
103.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
103.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
102.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
102.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
102.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
102.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
101.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
101.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
101.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
101.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
101.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
101.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
101.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
101.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
101.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
100.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
100.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
100.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
100.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
100.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
100.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
100.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
100.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
100.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
100.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
100.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
100.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
100.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
100.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
99.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
99.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
99.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
99.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
98.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
98.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
98.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
98.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
98.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
98.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
98.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
97.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
97.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
97.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
97.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
97.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
97.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
96.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
96.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
96.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
96.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
96.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
96.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
96.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
96.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
96.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
95.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
95.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
95.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
95.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
95.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
95.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
95.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
95.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
95.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
95.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
95.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
95.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
94.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
94.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
94.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
94.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
94.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
94.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
94.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
93.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
93.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
93.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
93.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
93.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
93.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
92.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
92.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
92.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
92.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
92.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
92.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
92.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
92.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
92.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
92.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
91.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
91.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
91.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
91.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
91.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
91.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
91.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
91.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
90.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
90.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
90.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
90.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
90.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
90.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
90.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
89.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
89.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
89.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
89.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
89.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
89.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
89.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
88.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
88.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
87.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
87.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
87.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
87.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
87.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
87.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
87.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
87.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
86.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
86.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
86.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
86.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
86.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
86.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
85.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
85.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
85.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
85.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
85.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
85.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
85.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
85.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
85.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
85.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
85.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
85.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
85.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
85.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
85.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
85.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
85.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
84.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
84.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
84.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
84.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
84.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
83.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
83.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
83.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
83.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
83.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
83.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
82.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
82.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
82.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
82.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
82.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
82.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
82.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
82.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
82.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
82.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
82.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
82.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
82.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
81.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
81.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
81.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
81.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
81.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
81.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
81.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
80.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
80.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
80.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
80.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
80.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
80.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
80.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
80.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
80.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
80.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
80.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
80.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
79.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
79.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
79.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
79.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
79.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
78.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
78.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
78.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
78.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
78.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
78.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
78.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
78.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
78.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
78.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
77.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
77.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
77.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
77.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
77.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
77.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
77.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
77.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
77.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
76.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
76.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
76.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
76.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
76.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
76.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
76.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
76.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
75.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
75.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
75.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
75.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
75.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
75.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
75.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
75.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
75.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
75.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
75.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
75.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
75.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
75.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
74.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
74.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
74.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
74.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
74.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
74.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
74.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
74.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
74.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
74.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
73.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
73.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
73.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
73.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
73.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
73.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
73.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
73.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
73.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
73.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
72.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
72.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
72.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
72.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
72.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
72.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
71.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
71.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
71.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
71.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
71.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
71.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
71.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
71.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
71.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
71.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
71.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
70.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
70.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
70.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
70.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
70.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
70.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
70.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
70.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
70.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
70.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
70.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
70.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
70.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
70.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
69.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
69.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
69.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
69.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
69.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
69.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
69.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
69.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
68.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
68.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
68.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
68.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
68.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
68.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
68.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
68.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
68.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
68.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
68.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
67.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
67.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
66.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
66.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
66.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
66.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
66.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
66.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
66.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
65.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
65.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
65.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
65.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
65.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
65.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
65.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
65.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
65.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
64.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
64.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
64.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
64.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
64.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
64.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
63.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
63.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
63.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
63.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
63.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
63.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
63.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
63.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
63.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
62.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
62.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
62.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
62.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
62.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
62.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
62.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
62.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
62.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
62.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
61.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
61.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
61.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
61.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
61.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
61.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
61.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
61.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
60.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
60.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
60.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
60.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
60.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
60.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
60.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
59.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
59.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
59.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
59.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
58.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
58.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
58.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
58.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
58.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
58.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
57.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
57.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
57.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
57.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
56.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
56.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
56.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
56.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
56.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
55.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
55.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
55.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
54.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
54.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
53.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
53.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
53.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
53.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
53.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
53.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
52.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
51.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
51.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
51.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
51.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
50.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
50.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
50.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
50.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
50.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
50.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
50.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
50.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
49.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
49.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
49.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
49.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
48.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
48.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
48.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
48.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
48.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
47.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
47.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
47.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
47.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
47.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
47.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
46.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
46.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
46.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
46.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
46.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
46.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
45.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
44.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
44.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
44.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
44.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
44.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
43.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
43.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
43.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
43.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
42.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
42.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
42.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
42.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
41.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
41.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
38.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
38.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
36.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
36.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
34.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
34.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
33.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
32.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
32.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
32.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
31.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
29.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
26.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
25.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
17.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
15.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
13.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GDI1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
82.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
165.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
150.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
147.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
143.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
138.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
138.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
126.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
118.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
118.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
112.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
107.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
107.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
106.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
106.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
103.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
101.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
100.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
100.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
99.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
98.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
96.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
95.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
94.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
93.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
93.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
92.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
92.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
91.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
91.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
90.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
89.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
89.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
89.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
89.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
89.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
89.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
88.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
87.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
85.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
85.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
84.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
83.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
83.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
82.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
81.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
81.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
80.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
79.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
78.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
78.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
77.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
77.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
77.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
77.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
76.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
76.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
75.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
74.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
74.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
73.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
73.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
73.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
73.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
72.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
72.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
72.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
72.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
70.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
69.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
69.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
69.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
69.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
68.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
68.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
68.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
68.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
67.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
67.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
66.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
65.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
64.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
63.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
63.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
63.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
62.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
61.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
61.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
61.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
54.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
53.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
51.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
51.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
50.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
49.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
46.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
45.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
45.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
44.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
40.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GDI1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
73.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
211.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
184.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
182.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
168.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
162.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
154.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
146.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
145.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
145.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
143.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
142.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
139.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
139.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
138.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
135.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
135.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
133.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
124.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
121.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
118.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
118.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
115.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
114.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
114.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
113.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
112.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
111.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
109.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
109.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
108.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
106.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
106.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
105.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
105.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
104.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
104.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
103.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
103.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
102.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
100.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
100.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
100.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
99.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
98.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
98.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
98.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
98.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
98.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
97.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
97.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
96.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
96.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
95.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
95.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
94.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
94.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
92.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
92.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
91.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
91.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
91.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
91.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
91.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
91.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
89.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
89.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
89.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
87.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
87.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
87.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
85.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
85.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
85.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
85.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
84.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
84.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
84.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
84.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
83.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
83.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
83.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
82.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
81.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
81.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
81.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
80.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
80.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
80.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
79.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
79.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
79.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
79.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
78.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
77.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
77.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
77.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
77.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
76.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
76.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
76.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
76.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
75.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
75.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
75.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
74.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
74.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
74.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
73.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
73.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
73.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
73.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
73.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
72.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
72.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
72.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
72.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
72.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
72.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
72.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
72.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
72.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
71.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
71.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
71.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
71.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
71.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
71.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
70.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
70.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
70.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
70.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
70.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
70.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
69.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
69.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
69.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
69.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
68.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
68.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
68.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
68.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
68.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
68.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
67.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
67.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
66.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
66.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
66.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
66.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
66.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
65.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
65.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
65.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
65.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
64.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
64.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
64.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
64.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
64.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
63.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
63.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
63.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
63.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
63.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
63.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
63.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
62.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
62.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
61.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
61.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
61.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
61.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
60.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
60.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
59.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
59.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
59.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
59.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
58.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
58.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
58.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
58.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
58.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
58.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
58.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
58.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
57.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
57.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
57.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
57.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
57.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
57.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
56.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
56.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
55.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
55.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
55.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
55.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
54.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
54.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
54.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
54.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
54.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
54.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
54.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
54.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
54.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
53.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
53.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
53.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
52.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
52.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
52.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
52.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
52.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
52.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
52.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
51.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
51.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
51.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
51.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
51.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
51.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
50.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
50.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
50.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
49.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
49.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
49.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
49.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
49.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
48.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
48.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
48.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
48.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
48.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
48.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
47.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
47.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
47.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
47.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
47.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
46.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
46.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
46.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
45.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
45.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
45.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
44.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
44.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
43.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
43.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
43.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
43.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
43.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
42.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
42.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
42.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
42.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
42.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
42.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
41.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
41.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
40.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
40.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
39.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
39.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
39.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
39.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
38.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
37.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
37.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
37.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
37.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
36.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
36.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
35.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
34.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
34.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
31.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
25.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
25.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0000640003
Tumor
0.7
CPT0006440003
Tumor
0.7
CPT0078510003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0084560003
Tumor
0.5
CPT0088900003
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0009000003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0078660003
Tumor
0.4
CPT0088970003
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0011240003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0014370004
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0010160003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0079510001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0001340003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0075560003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0088550004
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0086970003
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0020130001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0075570001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0079430001
Normal
0.0
CPT0025610001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0086360003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0017850003
Tumor
-0.2
CPT0086370003
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0002270011
Tumor
-0.2
CPT0088570001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0078800003
Tumor
-0.3
CPT0088500001
Normal
-0.3
CPT0026420001
Normal
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
