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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MT-CO3 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12089.0
Number of samples
349
Samples
Sample
Description
TPM
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
36537.1
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
33096.4
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
31030.7
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
30561.3
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
28952.7
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
28686.3
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
27408.8
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
26941.3
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
25936.6
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
25821.9
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
24944.8
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
24756.1
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
23900.9
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
23578.9
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
23214.7
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
22747.9
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
22441.6
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
22069.1
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
21783.2
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
21753.9
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
21555.8
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
21518.3
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
21455.6
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
21223.9
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
21132.6
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
20467.9
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
19837.4
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
19828.4
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
19729.0
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
19688.3
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
19651.9
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
19347.2
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
19332.8
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
19326.4
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
19229.0
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
19026.1
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
18826.8
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
18673.7
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
18590.2
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
18541.1
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
18447.1
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
18263.4
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
18250.3
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
18168.1
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
18063.5
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
18018.4
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
18016.3
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
17988.7
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
17872.0
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
17832.5
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
17545.0
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
17505.7
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
17472.1
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
17429.6
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
17353.4
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
17162.4
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
16994.3
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
16916.6
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
16876.0
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
16710.1
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
16617.7
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
16545.8
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
16338.8
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
16327.3
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
16240.4
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
16219.5
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
16210.5
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
16057.0
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
15975.0
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
15963.3
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
15946.3
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
15845.1
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
15770.8
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
15686.2
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
15563.8
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
15519.9
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
15510.8
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
15474.9
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
15438.7
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
15398.7
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
15325.6
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
15301.7
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
15288.2
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
14998.2
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
14896.5
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
14870.3
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
14847.6
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
14795.1
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
14642.0
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
14619.2
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
14617.3
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
14564.6
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
14542.9
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
14533.8
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
14517.4
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
14470.5
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
14431.0
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
14379.3
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
14337.5
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
14323.7
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
14319.7
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
14262.1
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
14236.4
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
14223.7
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
14197.0
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
14159.6
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
14093.9
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
14050.8
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
13980.1
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
13957.8
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
13799.8
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
13694.1
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
13677.3
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
13637.6
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
13633.1
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
13625.4
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
13609.2
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
13572.9
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
13568.8
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
13559.5
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
13549.1
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
13519.6
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
13506.6
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
13480.2
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
13320.2
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
13299.1
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
13218.3
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
13213.9
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
13181.8
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
13181.4
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
13117.4
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
13116.0
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
13092.2
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
13078.5
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
13032.9
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
13007.5
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
12948.4
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
12926.5
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
12846.5
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
12662.6
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
12628.4
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
12594.6
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
12586.9
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
12534.5
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
12472.0
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
12456.6
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
12449.9
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
12309.5
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
12263.1
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
12256.8
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
12137.4
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
12112.5
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
12066.9
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
11993.1
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
11985.9
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
11959.5
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
11953.0
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
11834.6
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
11830.0
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
11802.2
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
11801.0
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
11747.7
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
11723.6
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
11702.3
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
11670.4
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
11651.6
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
11515.9
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
11515.5
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
11456.4
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
11436.7
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
11434.9
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
11391.7
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
11389.7
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
11341.1
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
11326.1
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
11293.1
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
11251.5
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
11249.1
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
11050.5
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
11031.2
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
10971.0
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
10917.3
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
10916.7
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
10887.2
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
10867.4
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
10832.2
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
10824.2
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
10741.8
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
10628.2
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
10624.3
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
10619.9
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
10597.4
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
10587.0
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
10577.4
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
10559.8
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
10504.1
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
10471.5
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
10469.7
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
10465.6
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
10415.2
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
10334.0
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
10323.5
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
10322.5
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
10271.4
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
10163.7
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
10148.4
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
10136.2
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
10124.0
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
10100.4
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
9999.3
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
9971.0
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
9911.0
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
9900.6
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
9884.7
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
9831.0
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
9797.5
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
9794.8
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
9767.5
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
9702.4
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
9681.8
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
9656.0
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
9585.4
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
9553.1
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
9545.9
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
9529.6
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
9520.0
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
9433.9
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
9399.3
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
9382.6
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
9345.7
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
9286.5
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
9278.8
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
9250.3
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
9246.0
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
9082.1
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
9075.8
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
8971.0
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
8934.9
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
8931.1
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
8849.5
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
8840.8
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
8789.9
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
8779.3
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
8638.8
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
8582.3
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
8505.4
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
8497.0
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
8478.2
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
8439.4
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
8375.8
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
8326.1
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
8235.9
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
8226.5
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
8220.8
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
8212.2
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
8163.8
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
8125.0
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
8121.8
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
8117.5
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
8075.3
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
8075.1
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
8033.9
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
7954.5
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
7953.1
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
7942.0
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
7938.6
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
7925.6
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
7866.3
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
7862.4
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
7860.4
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
7856.6
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
7856.3
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
7846.8
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
7768.9
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
7765.2
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
7714.6
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
7677.2
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
7630.0
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
7542.8
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
7475.3
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
7436.9
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
7247.9
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
7242.0
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
7156.7
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
7141.5
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
7128.9
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
7127.0
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
7103.7
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
7098.4
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
7089.4
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
7026.6
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
7026.1
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
7019.5
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
7018.2
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
7015.7
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
7000.1
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
6959.1
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
6898.2
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
6894.3
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
6851.8
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
6844.1
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
6824.6
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
6788.5
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
6708.1
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
6677.1
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
6643.7
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
6626.6
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
6537.6
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
6509.4
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
6478.4
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
6274.9
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
6134.2
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
5924.1
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
5774.6
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
5755.0
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
5713.3
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
5701.5
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
5693.9
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
5636.1
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
5576.7
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
5456.7
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
5437.3
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
5399.9
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
5397.5
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
5351.2
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
5246.2
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
5153.1
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
5127.2
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
5084.8
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
5065.7
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
4879.4
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
4751.5
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
4713.4
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
4650.1
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
4649.5
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
4473.8
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
4439.9
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
4415.1
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
4235.5
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
4147.4
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
4044.3
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
3909.5
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
3304.1
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
3282.4
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
3223.4
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
3030.7
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
2763.4
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
2182.8
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MT-CO3 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14036.0
Number of samples
81
Samples
Sample
Description
TPM
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
62693.4
DO46396
0 years, female, NA, stage:III, dead, 583 days
48469.8
DO46400
0 years, female, NA, stage:III, dead, 719 days
45295.3
DO46408
0 years, female, NA, stage:III, dead, 489 days
39187.1
DO46331
0 years, female, NA, stage:III, dead, 612 days
31917.0
DO46546
0 years, female, NA, stage:III, dead, 1889 days
31346.5
DO46606
0 years, female, NA, stage:III, alive, 804 days
25209.9
DO46372
0 years, female, NA, stage:III, dead, 1326 days
24740.0
DO46588
0 years, female, NA, stage:III, dead, 438 days
21474.1
DO46566
0 years, female, NA, stage:III, dead, 673 days
21470.3
DO46374
0 years, female, NA, stage:III, dead, 1409 days
21249.0
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
20803.4
DO46350
0 years, female, NA, stage:III, dead, 886 days
20586.9
DO46398
0 years, female, NA, stage:III, alive, 437 days
19888.6
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
19472.7
DO46342
0 years, female, NA, stage:III, dead, 1398 days
19247.7
DO46561
0 years, female, NA, stage:III, dead, 195 days
18618.0
DO46551
0 years, female, NA, stage:III, dead, 1055 days
16618.0
DO46325
0 years, female, NA, stage:III, dead, 477 days
16055.2
DO46344
0 years, female, NA, stage:III, dead, 642 days
15629.8
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
15336.3
DO46334
0 years, female, NA, stage:III, dead, 496 days
14704.0
DO46362
0 years, female, NA, stage:III, dead, 1639 days
14398.3
DO46571
0 years, female, NA, stage:III, dead, 243 days
14205.8
DO46404
0 years, female, NA, stage:III, dead, 690 days
13952.7
DO46597
0 years, female, NA, stage:III, dead, 393 days
13924.9
DO46329
0 years, female, NA, stage:III, dead, 1699 days
13820.8
DO46468
0 years, female, NA, stage:III, alive, 2776 days
13115.6
DO46436
0 years, female, NA, stage:III, alive, 3193 days
13026.1
DO46386
0 years, female, NA, stage:III, dead, 1162 days
13007.1
DO46560
0 years, female, NA, stage:IV, dead, 286 days
12934.7
DO46358
0 years, female, NA, stage:III, dead, 423 days
12915.9
DO46493
0 years, female, NA, stage:IV, alive, 839 days
12676.4
DO46412
0 years, female, NA, stage:III, dead, 597 days
12466.1
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
12429.4
DO46378
0 years, female, NA, stage:III, alive, 843 days
12189.6
DO46518
0 years, female, NA, stage:III, alive, 2960 days
12159.3
DO46354
0 years, female, NA, stage:III, dead, 843 days
11842.4
DO46368
0 years, female, NA, stage:III, dead, 2879 days
11770.9
DO46443
0 years, female, NA, stage:III, dead, 2464 days
11510.0
DO46327
0 years, female, NA, stage:III, dead, 184 days
11396.3
DO46348
0 years, female, NA, stage:IV, dead, 287 days
11344.1
DO46364
0 years, female, NA, stage:III, dead, 806 days
11245.0
DO46528
0 years, female, NA, stage:III, alive, 6139 days
11141.3
DO46432
0 years, female, NA, stage:III, alive, 2218 days
10371.7
DO46370
0 years, female, NA, stage:III, dead, 1727 days
10256.8
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
10148.0
DO46602
0 years, female, NA, stage:III, dead, 205 days
10079.3
DO46346
0 years, female, NA, stage:III, dead, 1187 days
10030.0
DO46388
0 years, female, NA, stage:III, dead, 413 days
9866.7
DO46340
0 years, female, NA, stage:III, dead, 616 days
9858.7
DO46382
0 years, female, NA, stage:IV, dead, 311 days
9759.2
DO46402
0 years, female, NA, stage:III, dead, 511 days
9511.5
DO46463
0 years, female, NA, stage:III, dead, 2451 days
9299.1
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
9056.4
DO46380
0 years, female, NA, stage:III, dead, 1423 days
9021.5
DO46330
0 years, female, NA, stage:III, dead, 684 days
8992.3
DO46448
0 years, female, NA, stage:III, dead, 654 days
8979.4
DO46538
0 years, female, NA, stage:III, dead, 1527 days
8882.0
DO46392
0 years, female, NA, stage:III, dead, 628 days
8808.3
DO46568
0 years, female, NA, stage:III, dead, 320 days
8531.2
DO46581
0 years, female, NA, stage:III, dead, 408 days
8334.8
DO46333
0 years, female, NA, stage:III, dead, 359 days
8275.5
DO46390
0 years, female, NA, stage:III, dead, 374 days
8190.7
DO46576
0 years, female, NA, stage:III, alive, 133 days
8189.5
DO46326
0 years, female, NA, stage:III, dead, 701 days
8046.7
DO46352
0 years, female, NA, stage:III, dead, 677 days
7983.5
DO46533
0 years, female, NA, stage:III, alive, 3667 days
7294.9
DO46376
0 years, female, NA, stage:III, dead, 1430 days
7045.2
DO46336
0 years, female, NA, stage:IV, dead, 664 days
6902.1
DO46384
0 years, female, NA, stage:III, dead, 614 days
6696.5
DO46508
0 years, female, NA, stage:III, dead, 2101 days
6541.0
DO46586
0 years, female, NA, stage:III, dead, 1019 days
5839.0
DO46328
0 years, female, NA, stage:III, dead, 972 days
5755.8
DO46366
0 years, female, NA, stage:III, dead, 2054 days
5747.0
DO46356
0 years, female, NA, stage:III, dead, 911 days
5428.6
DO46332
0 years, female, NA, stage:III, dead, 689 days
5375.6
DO46611
0 years, female, NA, stage:III, dead, 734 days
4743.8
DO46453
0 years, female, NA, stage:III, dead, 3294 days
4342.5
DO46338
0 years, female, NA, stage:III, dead, 596 days
4010.0
DO46591
0 years, female, NA, stage:III, dead, 195 days
3247.8
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
N/A
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
N/A
21efd60f-6a31-4b98-9477-16a905_D2
Normal
N/A
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
N/A
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
N/A
285fed94-1495-448e-879b-b55de9_D2
Tumor
N/A
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
N/A
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
N/A
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
N/A
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
N/A
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
N/A
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
N/A
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
N/A
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
N/A
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
N/A
2f901c90-617e-46da-9fac-d68369_D2
Tumor
N/A
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
N/A
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
N/A
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
N/A
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
N/A
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
N/A
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
N/A
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
N/A
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
N/A
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
N/A
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
N/A
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
N/A
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
N/A
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
N/A
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
N/A
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
N/A
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
N/A
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
N/A
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
N/A
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
N/A
1772e913-f62e-446a-8cf3-720348_D2
Tumor
N/A
e9d416e7-f661-400a-896e-388545_D2
Tumor
N/A
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
N/A
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
N/A
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
N/A
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
N/A
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
N/A
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
N/A
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
N/A
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
N/A
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
N/A
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
N/A
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
N/A
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
N/A
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
N/A
10c2d629-0287-4511-ac25-f29031_D2
Tumor
N/A
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
N/A
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
N/A
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
N/A
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
N/A
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
N/A
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
N/A
340a3769-3031-41ae-bb08-a2f696_D2
Normal
N/A
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
N/A
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
N/A
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
N/A
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
N/A
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
N/A
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
N/A
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
N/A
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
N/A
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
N/A
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
N/A
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
N/A
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
N/A
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
N/A
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
N/A
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
N/A
15524912-685a-47ce-a824-567848_D2
Tumor
N/A
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
N/A
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
N/A
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
N/A
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
N/A
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
N/A
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
N/A
a3a26070-fb84-406a-8280-d555e6_D2
Normal
N/A
161317f3-1a39-438e-af45-cd2502_D2
Tumor
N/A
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
N/A
1db5574d-aca7-403c-8100-6e705f_D2
Normal
N/A
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
N/A
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
N/A
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
N/A
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
N/A
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
N/A
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
N/A
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
N/A
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
N/A
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
N/A
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
N/A
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
N/A
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
N/A
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
N/A
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
N/A
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
N/A
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
N/A
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
N/A
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
N/A
a65d8e76-640f-4341-a561-afbb57_D2
Normal
N/A
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
N/A
1a10c200-3895-4648-b951-94f99f_D2
Tumor
N/A
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
N/A
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
N/A
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
N/A
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.