HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:22.2 nTPM
HPA Brain:63.0 nTPM
GTEx:22.2 nTPM
FANTOM5:47.0 Scaled Tags Per Million
Pig:48.0 nTPM
Mouse:193.0 nTPM
Allen mouse:28.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000161
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 63.0
Sample id Sample description nTPM
Hippocampus
nTPM: 45.6
2621 Female, age 67, right hemisphere 52.2
1898 Male, age 80, left hemisphere 51.2
2148 Female, age 91, left hemisphere 48.5
2529 Female, age 94, left hemisphere 42.3
1855 Male, age 76, left hemisphere 39.9
1911 Female, age 85, right hemisphere 39.5
Dentate gyrus
nTPM: 46.8
1927 Female, age 91, both hemispheres 56.4
2531 Female, age 67, both hemispheres 55.5
2246 Female, age 85, both hemispheres 48.8
2528 Male, age 74, both hemispheres 42.8
2010 Male, age 76, both hemispheres 42.2
2530 Female, age 94, left hemisphere 35.0
Entorhinal gyrus
nTPM: 52.5
2764 Male, age 80, right hemisphere 58.3
2686 Male, age 75, right hemisphere 57.4
1938 Female, age 85, left hemisphere 56.3
2613 Female, age 94, left hemisphere 53.9
1787 Male, age 76, left hemisphere 51.8
2117 Female, age 91, right hemisphere 37.1
Hippocampus, CA1
nTPM: 52.7
2749 Male, age 80, left hemisphere 68.6
2527 Male, age 74, both hemispheres 52.0
1873 Female, age 85, both hemispheres 50.9
2082 Female, age 91, right hemisphere 46.7
2045 Male, age 76, both hemispheres 45.1
Hippocampus, CA2
nTPM: 46.8
1892 Male, age 76, both hemispheres 64.2
2113 Female, age 91, right hemisphere 45.5
1963 Male, age 80, left hemisphere 45.2
2249 Male, age 74, both hemispheres 43.5
1940 Female, age 85, left hemisphere 42.8
2437 Female, age 94, left hemisphere 39.4
Hippocampus, CA3
nTPM: 53.2
2137 Male, age 80, left hemisphere 64.0
2620 Female, age 94, left hemisphere 57.3
1867 Male, age 76, both hemispheres 53.7
2861 Female, age 67, both hemispheres 52.5
2436 Male, age 74, both hemispheres 46.4
1891 Female, age 85, both hemispheres 45.5
Parahippocampal cortex
nTPM: 56.0
1850 Male, age 80, both hemispheres 65.1
2245 Female, age 91, both hemispheres 63.3
2622 Female, age 67, right hemisphere 60.2
1990 Female, age 91, right hemisphere 59.7
2693 Female, age 94, both hemispheres 58.1
2250 Female, age 67, right hemisphere 57.3
1933 Female, age 85, both hemispheres 55.0
2532 Female, age 72, left hemisphere 52.9
2692 Male, age 74, both hemispheres 46.4
2018 Male, age 76, both hemispheres 41.6
Perirhinal gyrus
nTPM: 63.0
1847 Female, age 91, left hemisphere 75.4
1841 Female, age 85, right hemisphere 65.4
1794 Male, age 80, right hemisphere 59.9
2521 Female, age 94, right hemisphere 57.9
2848 Male, age 76, right hemisphere 56.6
Subiculum
nTPM: 45.6
1977 Female, age 85, both hemispheres 55.4
1901 Male, age 80, both hemispheres 53.9
2619 Male, age 74, both hemispheres 45.6
2438 Female, age 94, left hemisphere 43.4
2042 Male, age 76, both hemispheres 37.7
2729 Female, age 91, right hemisphere 37.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 22.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.2
Samples: 197

Max nTPM: 53.5
Min nTPM: 7.2
Std nTPM: 9.5
Median nTPM: 19.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 53.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 48.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 46.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 44.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 43.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 42.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 42.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 42.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 42.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 40.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 39.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 47.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.0
FF:10169-103B7 60 years, female 68.5
FF:10153-102I9 76 years, female 25.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 48.0
Pig sample Sample description nTPM
Subiculum
nTPM: 48.0
Samples: 4

Max nTPM: 60.8
Min nTPM: 36.0
Sample A Female 60.8
Sample B Female 43.9
Sample C Male 51.4
Sample D Male 36.0
Dorsal hippocampus
nTPM: 33.3
Samples: 4

Max nTPM: 41.5
Min nTPM: 21.9
Sample A Female 32.4
Sample B Female 37.5
Sample C Male 41.5
Sample D Male 21.9
Entorhinal cortex
nTPM: 40.1
Samples: 4

Max nTPM: 41.2
Min nTPM: 39.4
Sample A Female 39.4
Sample B Female 40.3
Sample C Male 41.2
Sample D Male 39.6
Ventral hippocampus
nTPM: 41.1
Samples: 4

Max nTPM: 51.1
Min nTPM: 34.3
Sample A Female 39.7
Sample B Female 34.3
Sample C Male 51.1
Sample D Male 39.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 193.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 193.0
Samples: 4

Max nTPM: 241.2
Min nTPM: 174.3
Sample A Male 177.6
Sample B Male 178.8
Sample C Female 174.3
Sample D Female 241.2
Hippocampal formation
nTPM: 153.2
Samples: 4

Max nTPM: 174.2
Min nTPM: 141.1
Sample A Male 141.1
Sample B Male 174.2
Sample C Female 155.5
Sample D Female 141.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 28.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 28.9
67765726 Antisense, RP_040916_01_F11, Mouse strain C57BL/6J (56 days, male) 32.8
70743888 Antisense, RP_050725_01_H12, Mouse strain C57BL/6J (56 days, male) 24.9

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