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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SREBF2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
82.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
210.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
172.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
164.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
163.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
154.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
147.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
146.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
137.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
134.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
131.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
131.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
121.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
119.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
119.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
114.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
108.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
105.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
102.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
96.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
94.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
93.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
92.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
90.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
90.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
90.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
89.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
89.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
87.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
86.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
83.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
81.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
80.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
73.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
73.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
72.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
70.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
69.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
66.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
65.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
64.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
63.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
62.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
62.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
57.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
57.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
56.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
51.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
50.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
46.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
45.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
44.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
42.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
41.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
37.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
35.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
34.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
33.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
33.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
31.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
30.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
22.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
16.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
12.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SREBF2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
82.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
80.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
70.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
67.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
64.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
64.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
62.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
55.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
48.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
45.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
44.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
42.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
41.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
41.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
41.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
41.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
41.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
40.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
40.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
40.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
40.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
40.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
39.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
38.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
38.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
37.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
36.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
35.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
35.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
35.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
35.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
35.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
35.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
34.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
34.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
34.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
34.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
33.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
33.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
33.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
33.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
32.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
32.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
31.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
31.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
31.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
31.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
31.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
30.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
30.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
30.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
30.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
30.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
30.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
30.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
30.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
30.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
29.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
29.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
29.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
29.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
29.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
29.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
29.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
29.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
29.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
28.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
28.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
28.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
28.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
28.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
28.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
28.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
28.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
28.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
28.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
28.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
28.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
28.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
28.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
28.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
28.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
28.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
27.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
27.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
27.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
27.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
27.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
27.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
27.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
27.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
27.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
27.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
26.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
26.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
26.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
26.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
26.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
26.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
26.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
26.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
26.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
26.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
26.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
26.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
26.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
26.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
26.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
26.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
26.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
26.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
26.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
25.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
25.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
25.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
25.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
25.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
25.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
25.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
25.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
25.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
25.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
24.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
24.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
24.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
24.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
24.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
24.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
24.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
24.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
24.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
24.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
24.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
24.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
24.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
24.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
24.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
24.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
24.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
24.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
23.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
23.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
23.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
23.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
23.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
23.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
23.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
23.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
23.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
23.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
23.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
23.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
23.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
23.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
23.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
23.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
23.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
23.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
23.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
23.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
23.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
23.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
23.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
23.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
22.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
22.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
22.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
22.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
22.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
22.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
22.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
22.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
22.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
22.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
22.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
22.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
22.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
22.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
22.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
21.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
21.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
21.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
21.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
21.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
21.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
21.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
21.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
21.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
21.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
21.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
21.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
21.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
21.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
21.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
21.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
21.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
21.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
20.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
20.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
20.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
20.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
20.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
20.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
20.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
20.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
20.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
20.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
20.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
20.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
20.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
20.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
20.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
20.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
20.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
20.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
20.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
20.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
20.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
20.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
20.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
20.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
20.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
20.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
20.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
19.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
19.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
19.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
19.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
19.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
19.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
19.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
19.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
19.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
19.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
19.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
19.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
19.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
19.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
19.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
19.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
19.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
19.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
18.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
18.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
18.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
18.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
18.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
18.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
18.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
18.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
18.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
18.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
18.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
18.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
18.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
17.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
17.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
17.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
17.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
17.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
17.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
17.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
17.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
17.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
17.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
17.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
17.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
17.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
17.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
17.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
17.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
17.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
17.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
17.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
17.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
17.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
17.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
17.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
17.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
16.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
16.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
16.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
16.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
16.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
16.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
16.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
16.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
16.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
16.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
16.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
16.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
16.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
16.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
16.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
16.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
16.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
16.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
16.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
16.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
16.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
16.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
15.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
15.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
15.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
15.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
15.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
15.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
15.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
15.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
15.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
14.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
14.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
14.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
14.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
14.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
14.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
14.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
14.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
14.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
14.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
14.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
14.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
14.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
14.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
13.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
13.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
13.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
13.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
13.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
12.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
12.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
11.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
11.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
11.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
11.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
11.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
11.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
10.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
10.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
9.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
9.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
8.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
8.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
8.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
8.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
7.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
7.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
5.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
4.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
3.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
3.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
0.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SREBF2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
34.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
32.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
32.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
31.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
31.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
30.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
28.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
28.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
28.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
28.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
27.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
27.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
27.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
26.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
25.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
24.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
24.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
24.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
24.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
24.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
24.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
23.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
22.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
22.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
21.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
21.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
21.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
21.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
20.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
20.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
20.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
20.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
20.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
20.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
20.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
19.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
19.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
19.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
19.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
19.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
19.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
19.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
19.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
19.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
19.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
18.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
18.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
17.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
17.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
17.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
17.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
17.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
17.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
16.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
16.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
16.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
16.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
16.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
16.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
15.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
15.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
15.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
14.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
12.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
12.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
12.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
12.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
12.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
12.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
12.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
11.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
11.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
10.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
8.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SREBF2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
121.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
93.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
77.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
74.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
66.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
58.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
56.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
52.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
47.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
46.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
45.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
44.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
43.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
43.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
42.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
41.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
41.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
40.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
39.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
39.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
38.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
38.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
37.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
37.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
36.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
36.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
35.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
35.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
34.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
34.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
34.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
34.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
33.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
33.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
32.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
32.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
31.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
31.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
31.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
31.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
30.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
30.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
30.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
30.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
30.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
30.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
29.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
29.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
29.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
29.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
28.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
28.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
28.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
28.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
27.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
27.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
27.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
27.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
27.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
27.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
27.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
27.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
27.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
27.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
26.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
26.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
26.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
26.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
26.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
25.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
25.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
24.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
24.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
24.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
24.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
24.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
24.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
24.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
24.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
24.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
24.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
23.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
23.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
23.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
23.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
23.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
23.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
23.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
22.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
22.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
22.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
22.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
22.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
22.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
22.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
22.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
22.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
22.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
22.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
21.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
21.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
21.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
21.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
21.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
21.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
21.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
21.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
21.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
20.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
20.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
20.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
20.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
20.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
20.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
20.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
20.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
19.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
19.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
19.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
19.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
19.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
19.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
19.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
19.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
19.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
19.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
18.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
18.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
18.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
18.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
18.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
18.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
18.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
17.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
17.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
17.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
17.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
17.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
17.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
17.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
17.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
16.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
16.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
16.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
16.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
16.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
15.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
15.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
15.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
15.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
15.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
15.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
15.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
15.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
15.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
14.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
14.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
14.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
14.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
14.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
14.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
14.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
13.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
13.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
13.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
12.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
12.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
12.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
12.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
11.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
11.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
11.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
11.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
11.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
10.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
10.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
10.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
9.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
9.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
8.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
8.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
8.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
8.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
8.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
7.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
6.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
6.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
5.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
4.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
3.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
2.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
