HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:17.2 nTPM
HPA Brain:48.5 nTPM
GTEx:17.2 nTPM
FANTOM5:52.9 Scaled Tags Per Million
Pig:13.0 nTPM
Mouse:4.3 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 48.5
Sample id Sample description nTPM
Hippocampus
nTPM: 41.9
1911 Female, age 85, right hemisphere 46.2
2529 Female, age 94, left hemisphere 45.3
2148 Female, age 91, left hemisphere 41.7
1855 Male, age 76, left hemisphere 40.8
1898 Male, age 80, left hemisphere 39.3
2621 Female, age 67, right hemisphere 38.0
Dentate gyrus
nTPM: 33.7
2246 Female, age 85, both hemispheres 46.2
2528 Male, age 74, both hemispheres 41.8
1927 Female, age 91, both hemispheres 35.6
2010 Male, age 76, both hemispheres 32.4
2530 Female, age 94, left hemisphere 25.8
2531 Female, age 67, both hemispheres 20.3
Entorhinal gyrus
nTPM: 40.4
2686 Male, age 75, right hemisphere 51.6
2613 Female, age 94, left hemisphere 41.7
2117 Female, age 91, right hemisphere 40.3
2764 Male, age 80, right hemisphere 39.8
1938 Female, age 85, left hemisphere 39.7
1787 Male, age 76, left hemisphere 29.5
Hippocampus, CA1
nTPM: 48.5
2749 Male, age 80, left hemisphere 75.5
2527 Male, age 74, both hemispheres 55.2
1873 Female, age 85, both hemispheres 43.7
2082 Female, age 91, right hemisphere 42.8
2045 Male, age 76, both hemispheres 25.1
Hippocampus, CA2
nTPM: 38.9
1963 Male, age 80, left hemisphere 50.8
2249 Male, age 74, both hemispheres 44.0
2113 Female, age 91, right hemisphere 43.5
1892 Male, age 76, both hemispheres 32.4
2437 Female, age 94, left hemisphere 31.5
1940 Female, age 85, left hemisphere 31.1
Hippocampus, CA3
nTPM: 39.9
2137 Male, age 80, left hemisphere 66.7
2436 Male, age 74, both hemispheres 44.9
1891 Female, age 85, both hemispheres 37.6
1867 Male, age 76, both hemispheres 34.3
2861 Female, age 67, both hemispheres 32.0
2620 Female, age 94, left hemisphere 24.2
Parahippocampal cortex
nTPM: 37.6
2692 Male, age 74, both hemispheres 54.0
2622 Female, age 67, right hemisphere 47.4
2250 Female, age 67, right hemisphere 41.3
1850 Male, age 80, both hemispheres 37.1
2245 Female, age 91, both hemispheres 35.8
2693 Female, age 94, both hemispheres 35.7
1933 Female, age 85, both hemispheres 35.1
2018 Male, age 76, both hemispheres 33.1
1990 Female, age 91, right hemisphere 33.0
2532 Female, age 72, left hemisphere 23.5
Perirhinal gyrus
nTPM: 30.9
2521 Female, age 94, right hemisphere 35.3
1847 Female, age 91, left hemisphere 34.9
2848 Male, age 76, right hemisphere 32.2
1794 Male, age 80, right hemisphere 28.6
1841 Female, age 85, right hemisphere 23.7
Subiculum
nTPM: 42.2
2619 Male, age 74, both hemispheres 48.2
2729 Female, age 91, right hemisphere 44.2
1901 Male, age 80, both hemispheres 43.5
2438 Female, age 94, left hemisphere 42.5
2042 Male, age 76, both hemispheres 38.5
1977 Female, age 85, both hemispheres 36.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 17.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.2
Samples: 197

Max nTPM: 41.5
Min nTPM: 2.5
Std nTPM: 8.3
Median nTPM: 15.4
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 41.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 39.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 37.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 37.3
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 36.4
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 34.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 33.7
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 32.2
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 32.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 32.0
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 31.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 52.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.9
FF:10169-103B7 60 years, female 52.9
FF:10153-102I9 76 years, female 52.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 13.0
Pig sample Sample description nTPM
Subiculum
nTPM: 5.5
Samples: 4

Max nTPM: 8.0
Min nTPM: 4.0
Sample A Female 4.6
Sample B Female 5.4
Sample C Male 8.0
Sample D Male 4.0
Dorsal hippocampus
nTPM: 12.0
Samples: 4

Max nTPM: 15.3
Min nTPM: 10.1
Sample A Female 10.1
Sample B Female 15.3
Sample C Male 10.2
Sample D Male 12.4
Entorhinal cortex
nTPM: 4.0
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.6
Sample A Female 3.7
Sample B Female 3.6
Sample C Male 3.8
Sample D Male 4.9
Ventral hippocampus
nTPM: 13.0
Samples: 4

Max nTPM: 23.1
Min nTPM: 9.1
Sample A Female 9.1
Sample B Female 9.1
Sample C Male 10.6
Sample D Male 23.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 4.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.6
Samples: 4

Max nTPM: 3.2
Min nTPM: 2.2
Sample A Male 2.5
Sample B Male 2.2
Sample C Female 3.2
Sample D Female 2.4
Hippocampal formation
nTPM: 4.3
Samples: 4

Max nTPM: 5.6
Min nTPM: 3.1
Sample A Male 3.6
Sample B Male 5.6
Sample C Female 4.9
Sample D Female 3.1

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