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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OPA1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
27.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
26.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
22.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
19.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
18.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
18.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
18.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
18.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
18.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
16.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
16.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
15.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
15.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
15.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
14.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
14.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
14.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
14.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
13.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
13.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
13.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
13.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
12.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
12.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
12.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
12.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
12.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
11.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
11.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
10.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
9.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
8.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
7.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
5.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OPA1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
34.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
29.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
21.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
19.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
18.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
17.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
17.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
17.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
17.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
17.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
17.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
16.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
16.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
15.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
15.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
15.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
15.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
15.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
14.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
14.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
14.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
14.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
14.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
14.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
14.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
14.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
14.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
13.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
13.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
13.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
13.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
13.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
13.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
13.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
13.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
13.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
13.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
13.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
13.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
12.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
12.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
12.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
12.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
12.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
12.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
12.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
12.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
12.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
12.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
12.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
12.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
12.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
12.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
12.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
12.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
12.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
12.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
12.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
11.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
11.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
11.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
11.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
11.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
11.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
11.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
11.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
11.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
11.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
11.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
11.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
11.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
11.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
11.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
11.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
11.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
11.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
11.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
11.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
11.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
11.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
11.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
11.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
11.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
11.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
10.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
10.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
10.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
10.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
10.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
10.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
10.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
10.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
10.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
10.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
10.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
10.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
10.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
10.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
10.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
10.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
10.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
10.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
10.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
10.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
10.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
10.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
10.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
10.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
10.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
10.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
10.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
10.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
10.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
10.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
10.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
10.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
9.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
9.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
9.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
9.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
9.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
9.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
9.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
9.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
9.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
9.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
9.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
9.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
9.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
9.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
9.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
9.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
9.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
9.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
9.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
9.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
9.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
9.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
9.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
9.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
9.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
9.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
9.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
9.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
9.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
9.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
9.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
9.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
9.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
9.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
9.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
9.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
9.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
9.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
8.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
8.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
8.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
8.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
8.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
8.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
8.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
8.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
8.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
8.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
8.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
8.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
8.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
8.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
8.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
8.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
8.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
8.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
8.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
8.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
8.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
8.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
8.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
8.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
8.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
8.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
8.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
8.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
8.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
8.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
8.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
8.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
8.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
8.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
8.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
8.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
8.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
8.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
8.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
8.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
8.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
7.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
7.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
7.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
7.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
7.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
7.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
7.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
7.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
7.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
7.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
7.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
7.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
7.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
7.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
7.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
7.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
7.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
7.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
7.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
7.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
7.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
7.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
7.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
7.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
7.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
7.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
7.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
7.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
7.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
7.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
7.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
7.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
7.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
7.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
7.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
7.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
7.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
7.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
7.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
7.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
7.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
7.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
7.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
7.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
7.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
7.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
7.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
7.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
7.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
7.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
7.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
7.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
6.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
6.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
6.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
6.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
6.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
6.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
6.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
6.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
6.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
6.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
6.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
6.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
6.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
6.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
6.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
6.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
6.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
6.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
6.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
6.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
6.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
6.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
6.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
6.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
6.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
6.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
6.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
6.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
6.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
6.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
6.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
6.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
6.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
6.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
6.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
6.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
6.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
6.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
6.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
5.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
5.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
5.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
5.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
5.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
5.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
5.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
5.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
5.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
5.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
5.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
5.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
5.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
5.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
5.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
5.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
5.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
5.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
5.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
5.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
4.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
4.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
4.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
4.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
4.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
4.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
4.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
4.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
4.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
4.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
4.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
4.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
4.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
4.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
4.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
4.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
3.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
3.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
3.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
3.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
3.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
3.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
3.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
3.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
2.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
2.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OPA1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
28.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
27.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
24.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
21.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
20.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
20.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
20.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
19.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
19.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
18.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
18.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
18.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
17.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
17.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
17.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
17.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
17.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
16.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
16.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
16.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
16.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
16.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
16.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
15.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
15.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
14.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
14.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
14.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
14.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
14.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
13.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
13.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
13.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
13.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
13.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
13.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
13.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
13.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
13.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
12.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
12.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
12.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
12.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
12.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
12.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
12.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
12.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
11.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
11.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
11.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
11.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
11.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
11.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
11.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
11.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
11.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
10.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
10.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
10.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
10.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
9.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
9.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
8.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
8.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
8.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
8.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
8.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
7.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OPA1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
82.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
46.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
38.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
32.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
31.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
31.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
31.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
24.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
21.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
20.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
20.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
20.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
19.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
19.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
18.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
18.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
18.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
18.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
18.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
17.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
17.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
17.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
17.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
17.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
16.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
16.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
16.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
15.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
15.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
15.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
15.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
15.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
14.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
14.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
14.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
14.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
14.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
14.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
14.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
14.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
14.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
14.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
14.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
13.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
13.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
13.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
13.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
13.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
13.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
13.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
13.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
13.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
13.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
12.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
12.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
12.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
12.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
12.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
12.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
12.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
12.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
12.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
12.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
12.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
11.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
11.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
11.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
11.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
11.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
11.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
11.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
11.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
11.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
11.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
11.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
11.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
11.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
11.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
11.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
11.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
11.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
11.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
11.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
10.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
10.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
10.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
10.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
10.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
10.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
10.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
10.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
10.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
10.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
10.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
10.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
10.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
9.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
9.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
9.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
9.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
9.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
9.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
9.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
9.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
9.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
9.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
9.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
9.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
9.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
9.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
9.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
9.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
8.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
8.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
8.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
8.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
8.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
8.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
8.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
8.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
8.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
8.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
8.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
8.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
8.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
8.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
8.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
8.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
8.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
8.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
8.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
8.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
8.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
7.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
7.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
7.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
7.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
7.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
7.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
7.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
7.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
6.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
6.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
5.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
5.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
5.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
5.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
5.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
5.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
5.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
5.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
5.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
4.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
4.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
4.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
3.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
3.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
3.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
2.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
2.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
1.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
1.6
CPT0002270011
Tumor
1.1
CPT0079180003
Tumor
1.0
CPT0006950001
Normal
0.7
CPT0065450001
Normal
0.6
CPT0092310003
Normal
0.6
CPT0077140001
Normal
0.6
CPT0025610001
Normal
0.6
CPT0076350001
Normal
0.6
CPT0010170001
Normal
0.6
CPT0088920001
Normal
0.5
CPT0089480003
Normal
0.5
CPT0066430001
Normal
0.5
CPT0092800003
Normal
0.5
CPT0078840001
Normal
0.5
CPT0014130001
Normal
0.5
CPT0025060001
Normal
0.5
CPT0078670001
Normal
0.5
CPT0082010001
Normal
0.5
CPT0023710001
Normal
0.4
CPT0077500001
Normal
0.4
CPT0087050003
Normal
0.4
CPT0000790001
Normal
0.4
CPT0014470001
Normal
0.4
CPT0012770003
Normal
0.4
CPT0006730001
Normal
0.4
CPT0079000001
Normal
0.4
CPT0064400001
Normal
0.4
CPT0081620001
Normal
0.4
CPT0088780001
Normal
0.4
CPT0079430001
Normal
0.4
CPT0026420001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0086970003
Normal
0.3
CPT0001350001
Normal
0.3
CPT0001500009
Tumor
0.3
CPT0007870001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0088710001
Normal
0.3
CPT0069010001
Normal
0.3
CPT0078940001
Normal
0.3
CPT0092740003
Normal
0.3
CPT0020130001
Normal
0.3
CPT0012570003
Normal
0.3
CPT0078530001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0007470001
Normal
0.3
CPT0014350001
Normal
0.3
CPT0002370001
Normal
0.3
CPT0086370003
Normal
0.3
CPT0023360001
Normal
0.3
CPT0012290003
Normal
0.2
CPT0000890001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0009080003
Normal
0.2
CPT0001550001
Normal
0.2
CPT0024670003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0088500001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0088970003
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0014370004
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0063330001
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0086890003
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0023350003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0012180003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0088480003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0078510003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0012900004
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0079410003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0026410003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0076330003
Tumor
-0.3
CPT0086820003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0079270003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0001180009
Tumor
-0.3
CPT0069160003
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0010110003
Tumor
-0.3
CPT0012080003
Tumor
-0.4
CPT0063630003
Tumor
-0.4
CPT0025290003
Tumor
-0.4
CPT0092290003
Tumor
-0.4
CPT0025170003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0064370003
Tumor
-0.4
CPT0014160003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0025580004
Tumor
-0.4
CPT0015810003
Tumor
-0.4
CPT0081880003
Tumor
-0.4
CPT0092160003
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0071150004
Tumor
-0.5
CPT0088550004
Tumor
-0.5
CPT0066470004
Tumor
-0.5
CPT0077310003
Tumor
-0.5
CPT0025350003
Tumor
-0.5
CPT0011240003
Tumor
-0.5
CPT0078990003
Tumor
-0.5
CPT0001340003
Tumor
-0.5
CPT0086030003
Tumor
-0.5
CPT0089020003
Tumor
-0.5
CPT0086360003
Tumor
-0.5
CPT0063320003
Tumor
-0.5
CPT0084560003
Tumor
-0.5
CPT0015910003
Tumor
-0.5
CPT0066480003
Tumor
-0.5
CPT0065690003
Tumor
-0.5
CPT0065750003
Tumor
-0.6
CPT0065870003
Tumor
-0.6
CPT0092730003
Tumor
-0.6
CPT0006900003
Tumor
-0.6
CPT0023690003
Tumor
-0.6
CPT0021240003
Tumor
-0.6
CPT0088900003
Tumor
-0.6
CPT0017410003
Tumor
-0.6
CPT0092790003
Tumor
-0.6
CPT0017850003
Tumor
-0.6
CPT0001220008
Tumor
-0.6
CPT0012370003
Tumor
-0.7
CPT0025230003
Tumor
-0.7
CPT0088760003
Tumor
-0.7
CPT0079230003
Tumor
-0.7
CPT0078930003
Tumor
-0.7
CPT0019130003
Tumor
-0.8
CPT0079380003
Tumor
-0.8
CPT0065930003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
