We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAMP5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
191.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
115.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
102.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
95.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
91.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
81.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
80.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
76.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
73.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
71.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
70.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
57.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
55.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
52.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
51.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
49.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
48.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
46.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
45.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
45.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
45.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
44.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
42.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
41.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
41.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
41.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
39.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
38.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
38.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
38.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
37.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
37.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
36.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
36.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
34.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
33.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
32.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
30.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
29.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
29.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
29.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
27.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
26.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
26.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
25.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
25.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
24.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
23.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
23.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
22.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
22.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
22.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
21.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
21.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
18.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
17.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
16.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
12.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
10.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
8.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
3.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAMP5 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
68.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
58.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
45.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
40.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
39.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
35.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
35.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
34.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
32.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
32.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
31.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
30.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
29.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
29.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
29.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
28.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
27.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
27.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
26.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
26.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
25.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
25.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
24.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
24.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
24.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
24.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
24.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
24.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
23.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
23.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
23.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
23.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
23.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
22.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
22.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
22.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
21.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
21.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
21.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
21.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
20.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
20.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
20.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
20.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
20.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
20.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
19.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
19.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
19.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
19.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
19.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
19.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
19.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
19.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
18.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
18.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
18.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
18.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
18.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
18.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
17.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
17.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
17.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
17.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
17.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
17.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
17.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
17.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
17.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
17.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
16.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
16.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
16.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
16.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
16.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
16.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
16.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
15.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
15.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
15.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
15.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
15.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
15.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
15.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
15.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
15.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
15.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
15.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
14.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
14.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
14.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
14.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
14.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
14.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
14.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
14.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
14.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
14.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
14.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
14.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
13.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
13.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
13.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
13.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
13.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
13.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
13.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
13.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
13.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
13.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
13.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
13.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
13.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
13.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
13.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
13.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
13.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
13.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
13.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
13.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
13.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
12.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
12.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
12.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
12.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
12.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
12.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
12.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
12.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
12.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
12.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
12.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
11.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
11.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
11.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
11.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
11.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
11.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
11.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
11.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
11.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
11.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
11.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
11.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
11.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
11.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
10.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
10.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
10.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
10.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
10.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
10.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
10.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
10.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
10.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
10.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
10.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
10.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
10.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
10.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
10.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
10.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
10.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
10.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
10.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
10.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
10.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
10.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
9.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
9.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
9.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
9.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
9.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
9.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
9.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
9.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
9.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
9.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
9.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
9.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
9.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
9.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
9.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
9.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
9.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
9.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
9.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
9.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
9.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
8.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
8.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
8.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
8.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
8.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
8.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
8.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
8.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
8.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
8.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
8.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
8.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
8.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
8.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
8.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
8.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
8.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
8.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
8.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
8.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
8.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
7.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
7.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
7.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
7.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
7.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
7.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
7.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
7.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
7.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
7.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
7.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
7.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
7.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
7.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
7.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
7.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
7.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
7.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
7.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
7.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
7.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
7.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
7.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
6.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
6.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
6.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
6.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
6.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
6.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
6.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
6.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
6.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
6.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
6.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
6.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
6.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
6.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
6.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
6.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
6.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
6.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
6.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
6.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
6.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
6.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
6.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
6.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
6.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
6.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
6.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
6.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
5.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
5.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
5.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
5.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
5.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
5.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
5.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
5.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
5.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
5.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
5.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
5.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
5.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
5.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
5.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
5.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
5.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
5.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
5.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
5.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
5.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
5.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
5.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
5.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
5.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
5.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
4.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
4.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
4.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
4.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
4.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
4.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
4.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
4.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
4.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
4.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
4.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
4.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
4.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
4.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
4.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
4.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
4.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
4.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
4.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
4.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
4.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
4.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
4.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
4.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
4.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
4.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
4.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
4.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
4.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
4.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
4.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
3.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
3.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
3.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
3.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
3.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
3.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
3.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
3.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
3.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
3.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
3.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
3.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
3.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
3.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
3.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
3.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
3.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
3.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
3.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
3.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
3.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
3.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
2.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
2.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
2.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
2.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
2.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
2.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
2.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
2.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
2.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
2.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
2.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
2.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
2.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
2.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
2.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
2.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
2.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
2.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
2.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
1.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
1.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
1.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
1.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
1.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAMP5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
32.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
31.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
30.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
28.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
23.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
22.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
22.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
19.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
19.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
19.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
18.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
18.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
18.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
18.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
17.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
17.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
17.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
16.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
16.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
16.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
16.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
15.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
15.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
15.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
14.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
14.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
14.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
13.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
13.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
13.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
13.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
12.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
12.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
12.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
12.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
12.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
11.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
11.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
11.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
11.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
11.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
10.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
10.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
10.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
9.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
9.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
9.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
8.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
8.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
8.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
7.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
7.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
7.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
7.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
7.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
7.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
7.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
7.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
7.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
6.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
6.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
6.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
6.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
6.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
6.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
6.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
6.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
6.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
6.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
6.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
5.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
5.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
4.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
4.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
4.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
4.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
3.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
3.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
3.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
2.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
1.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAMP5 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
128.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
92.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
63.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
62.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
58.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
55.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
54.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
48.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
45.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
45.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
44.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
42.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
41.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
40.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
39.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
37.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
36.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
35.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
35.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
35.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
32.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
32.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
31.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
31.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
31.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
30.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
30.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
29.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
28.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
28.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
27.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
27.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
27.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
27.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
26.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
25.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
25.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
24.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
24.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
24.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
24.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
24.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
24.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
24.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
23.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
23.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
23.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
23.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
23.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
22.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
22.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
22.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
22.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
22.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
21.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
21.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
21.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
20.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
20.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
20.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
20.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
20.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
20.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
20.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
20.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
19.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
19.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
19.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
19.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
19.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
19.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
18.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
18.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
17.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
17.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
17.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
17.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
17.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
16.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
16.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
16.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
16.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
16.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
16.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
16.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
16.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
16.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
16.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
16.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
15.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
15.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
15.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
14.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
14.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
14.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
14.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
14.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
14.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
14.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
14.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
14.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
13.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
13.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
13.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
13.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
13.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
13.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
13.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
13.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
13.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
12.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
12.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
12.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
12.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
12.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
12.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
12.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
12.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
12.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
11.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
11.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
11.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
11.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
11.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
11.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
11.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
11.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
11.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
11.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
11.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
11.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
10.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
10.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
10.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
10.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
10.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
10.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
10.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
10.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
10.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
10.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
9.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
9.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
9.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
9.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
9.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
9.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
9.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
9.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
9.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
9.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
8.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
8.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
8.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
8.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
8.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
8.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
8.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
8.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
8.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
7.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
7.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
7.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
7.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
7.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
7.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
6.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
6.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
6.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
6.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
6.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
6.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
6.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
6.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
6.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
6.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
6.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
6.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
6.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
5.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
5.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
5.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
5.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
5.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
5.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
5.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
4.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
4.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
4.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
4.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
4.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
4.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
4.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
4.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
4.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
4.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
3.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
3.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
3.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
3.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
3.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
3.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
2.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
2.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
2.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
2.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
2.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
2.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
2.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
1.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
