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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STK39 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
83.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
81.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
71.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
62.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
61.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
58.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
57.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
54.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
54.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
54.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
46.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
45.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
44.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
44.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
44.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
40.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
40.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
39.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
38.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
34.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
31.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
29.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
29.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
28.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
28.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
27.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
27.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
26.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
26.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
25.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
25.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
25.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
23.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
22.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
21.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
18.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
17.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
17.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
17.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
16.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
16.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
15.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
15.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
15.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
14.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
14.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
9.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
8.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
5.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
2.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STK39 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
168.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
122.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
101.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
100.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
99.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
97.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
89.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
73.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
67.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
67.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
67.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
67.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
65.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
64.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
63.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
59.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
57.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
56.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
55.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
54.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
54.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
53.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
53.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
52.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
50.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
47.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
46.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
46.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
46.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
45.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
42.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
42.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
41.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
41.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
40.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
40.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
39.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
39.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
39.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
38.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
38.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
37.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
35.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
35.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
35.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
35.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
34.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
34.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
33.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
33.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
33.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
33.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
32.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
32.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
32.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
32.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
31.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
31.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
31.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
31.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
31.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
30.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
29.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
29.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
29.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
29.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
28.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
28.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
28.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
28.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
28.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
28.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
27.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
27.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
27.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
27.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
26.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
26.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
25.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
25.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
25.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
25.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
25.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
25.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
24.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
24.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
24.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
24.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
24.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
24.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
23.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
23.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
23.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
23.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
23.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
22.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
22.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
22.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
22.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
22.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
21.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
21.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
21.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
21.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
21.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
21.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
21.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
20.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
20.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
20.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
20.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
20.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
20.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
20.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
20.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
20.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
20.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
20.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
19.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
19.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
19.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
19.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
19.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
19.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
19.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
19.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
18.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
18.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
18.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
18.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
18.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
18.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
18.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
17.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
17.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
17.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
17.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
17.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
17.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
17.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
17.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
17.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
17.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
16.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
16.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
16.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
16.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
16.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
16.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
16.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
16.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
16.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
16.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
16.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
15.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
15.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
15.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
15.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
15.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
15.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
15.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
15.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
15.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
15.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
15.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
15.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
15.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
15.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
14.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
14.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
14.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
14.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
14.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
14.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
14.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
14.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
14.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
14.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
14.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
14.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
14.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
13.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
13.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
13.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
13.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
13.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
13.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
13.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
13.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
13.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
13.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
13.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
13.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
13.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
12.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
12.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
12.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
12.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
12.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
12.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
12.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
12.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
12.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
11.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
11.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
11.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
11.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
11.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
11.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
11.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
11.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
11.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
11.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
11.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
11.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
11.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
11.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
11.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
10.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
10.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
10.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
10.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
10.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
10.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
10.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
10.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
10.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
10.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
10.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
10.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
10.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
10.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
10.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
10.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
10.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
10.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
9.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
9.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
9.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
9.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
9.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
9.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
9.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
9.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
9.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
9.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
9.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
9.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
9.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
9.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
8.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
8.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
8.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
8.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
8.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
8.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
8.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
8.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
8.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
8.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
8.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
8.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
8.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
8.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
8.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
8.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
8.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
7.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
7.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
7.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
7.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
7.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
7.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
7.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
7.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
7.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
7.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
7.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
7.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
7.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
7.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
7.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
6.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
6.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
6.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
6.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
6.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
6.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
6.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
6.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
6.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
6.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
6.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
6.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
6.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
6.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
6.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
6.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
6.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
6.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
6.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
6.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
6.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
6.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
6.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
5.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
5.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
5.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
5.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
5.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
5.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
5.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
5.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
5.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
5.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
5.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
5.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
5.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
5.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
5.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
5.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
5.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
5.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
5.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
5.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
5.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
5.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
5.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
5.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
5.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
4.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
4.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
4.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
4.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
4.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
4.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
4.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
4.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
4.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
4.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
4.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
4.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
4.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
3.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
3.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
3.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
3.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
3.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
3.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
3.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
3.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
3.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
3.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
3.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
3.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
3.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
3.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
3.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
3.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
2.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
2.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
2.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
2.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
2.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
2.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
2.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
2.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
2.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
2.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
2.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
2.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
1.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
1.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
1.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
1.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
1.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
0.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
0.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
0.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
0.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STK39 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
164.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
122.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
118.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
96.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
87.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
76.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
68.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
58.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
52.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
52.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
49.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
44.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
41.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
40.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
39.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
39.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
38.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
38.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
38.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
37.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
37.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
36.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
35.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
35.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
34.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
34.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
32.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
31.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
31.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
29.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
27.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
25.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
23.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
23.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
21.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
21.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
20.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
20.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
19.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
19.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
18.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
17.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
17.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
16.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
16.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
16.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
16.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
15.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
14.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
14.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
14.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
14.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
14.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
14.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
13.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
13.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
12.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
12.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
12.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
12.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
12.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
11.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
11.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
10.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
10.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
9.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
9.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
9.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
9.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
8.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
8.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
8.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
8.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
8.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
7.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
6.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
6.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
6.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
6.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
4.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
3.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
2.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STK39 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
62.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
60.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
47.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
47.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
35.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
34.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
34.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
34.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
33.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
32.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
31.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
31.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
29.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
29.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
27.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
27.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
26.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
26.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
26.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
25.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
25.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
24.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
24.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
22.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
22.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
22.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
21.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
21.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
20.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
20.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
19.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
18.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
18.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
18.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
17.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
17.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
17.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
17.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
17.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
17.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
17.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
16.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
16.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
16.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
16.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
16.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
15.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
15.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
15.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
15.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
15.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
15.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
15.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
14.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
14.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
14.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
13.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
13.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
13.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
13.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
13.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
13.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
12.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
12.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
12.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
12.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
12.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
12.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
11.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
11.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
11.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
11.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
11.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
11.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
11.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
11.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
11.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
11.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
11.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
10.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
10.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
10.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
10.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
10.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
10.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
10.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
10.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
10.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
9.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
9.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
9.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
9.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
9.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
9.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
9.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
9.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
9.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
9.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
9.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
9.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
8.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
8.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
8.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
8.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
8.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
8.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
8.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
8.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
8.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
8.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
8.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
8.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
7.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
7.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
7.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
7.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
7.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
7.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
7.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
7.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
7.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
7.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
7.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
6.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
6.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
6.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
6.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
6.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
6.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
6.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
6.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
6.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
6.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
6.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
5.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
5.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
5.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
5.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
5.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
5.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
5.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
5.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
5.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
4.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
4.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
4.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
4.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
4.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
4.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
4.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
4.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
4.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
4.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
4.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
4.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
3.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
3.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
3.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
3.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
3.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
3.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
3.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
3.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
3.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
2.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
2.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
2.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
2.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
2.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
2.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
2.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
2.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
2.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
1.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
1.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
1.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
0.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
0.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0081880003
Tumor
1.8
CPT0079180003
Tumor
1.8
CPT0012550003
Tumor
1.3
CPT0078660003
Tumor
1.3
CPT0012670003
Tumor
1.3
CPT0086820003
Tumor
1.1
CPT0012280003
Tumor
1.1
CPT0023350003
Tumor
1.0
CPT0086950003
Tumor
1.0
CPT0088970003
Tumor
0.9
CPT0025050003
Tumor
0.8
CPT0025880003
Tumor
0.7
CPT0025230003
Tumor
0.7
CPT0024670003
Tumor
0.7
CPT0012080003
Tumor
0.7
CPT0088690003
Tumor
0.7
CPT0075130003
Tumor
0.7
CPT0001180009
Tumor
0.6
CPT0078510003
Tumor
0.6
CPT0020120003
Tumor
0.6
CPT0088480003
Tumor
0.5
CPT0015810003
Tumor
0.5
CPT0089020003
Tumor
0.5
CPT0069000003
Tumor
0.5
CPT0069160003
Tumor
0.4
CPT0088630003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0065930003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0019130003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0025110003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0017410003
Tumor
0.1
CPT0012370003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0084560003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0089460004
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0077140001
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0012180003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0007860003
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0088570001
Normal
-0.2
CPT0086030003
Tumor
-0.2
CPT0012920003
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0009060003
Tumor
-0.2
CPT0009080003
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0088550004
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0092790003
Tumor
-0.2
CPT0024680001
Normal
-0.3
CPT0015730003
Tumor
-0.3
CPT0063640001
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0002270011
Tumor
-0.3
CPT0012570003
Normal
-0.3
CPT0009020003
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0065820001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0086360003
Tumor
-0.3
CPT0088920001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0069190001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0025580004
Tumor
-0.3
CPT0088500001
Normal
-0.3
CPT0092730003
Tumor
-0.3
CPT0001350001
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0077110003
Tumor
-0.3
CPT0006950001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0013790003
Normal
-0.4
CPT0000660001
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0001510001
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0012090003
Normal
-0.4
CPT0025060001
Normal
-0.4
CPT0081600003
Tumor
-0.4
CPT0065810003
Tumor
-0.4
CPT0023360001
Normal
-0.4
CPT0012640003
Normal
-0.4
CPT0092800003
Normal
-0.4
CPT0020130001
Normal
-0.4
CPT0089480003
Normal
-0.5
CPT0085670003
Tumor
-0.5
CPT0010170001
Normal
-0.5
CPT0088780001
Normal
-0.5
CPT0078840001
Normal
-0.5
CPT0066430001
Normal
-0.5
CPT0077500001
Normal
-0.5
CPT0000780007
Tumor
-0.5
CPT0023710001
Normal
-0.5
CPT0086870003
Tumor
-0.5
CPT0001230001
Normal
-0.5
CPT0001540009
Tumor
-0.6
CPT0026410003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
