HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:13.5 nTPM
HPA Brain:54.3 nTPM
GTEx:13.5 nTPM
FANTOM5:30.8 Scaled Tags Per Million
Pig:80.1 nTPM
Mouse:38.2 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061803Antibody HPA062802Antibody CAB046022
Glial cells Not detectedLowNot detected
Neuronal cells HighMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 54.3
Sample id Sample description nTPM
Hippocampus
nTPM: 50.3
2621 Female, age 67, right hemisphere 60.0
1898 Male, age 80, left hemisphere 59.1
2529 Female, age 94, left hemisphere 58.4
1911 Female, age 85, right hemisphere 44.7
1855 Male, age 76, left hemisphere 40.8
2148 Female, age 91, left hemisphere 38.8
Dentate gyrus
nTPM: 47.2
2530 Female, age 94, left hemisphere 71.5
2010 Male, age 76, both hemispheres 47.7
1927 Female, age 91, both hemispheres 44.7
2531 Female, age 67, both hemispheres 43.0
2246 Female, age 85, both hemispheres 42.5
2528 Male, age 74, both hemispheres 33.8
Entorhinal gyrus
nTPM: 49.6
2686 Male, age 75, right hemisphere 56.7
2117 Female, age 91, right hemisphere 51.4
2764 Male, age 80, right hemisphere 51.4
1938 Female, age 85, left hemisphere 50.0
2613 Female, age 94, left hemisphere 47.2
1787 Male, age 76, left hemisphere 41.0
Hippocampus, CA1
nTPM: 46.6
2749 Male, age 80, left hemisphere 61.0
1873 Female, age 85, both hemispheres 52.5
2527 Male, age 74, both hemispheres 50.7
2082 Female, age 91, right hemisphere 35.9
2045 Male, age 76, both hemispheres 32.7
Hippocampus, CA2
nTPM: 52.1
1892 Male, age 76, both hemispheres 69.7
1963 Male, age 80, left hemisphere 65.2
2437 Female, age 94, left hemisphere 56.1
2249 Male, age 74, both hemispheres 45.7
1940 Female, age 85, left hemisphere 39.1
2113 Female, age 91, right hemisphere 37.0
Hippocampus, CA3
nTPM: 49.7
2436 Male, age 74, both hemispheres 70.6
1867 Male, age 76, both hemispheres 56.5
1891 Female, age 85, both hemispheres 52.4
2861 Female, age 67, both hemispheres 44.9
2137 Male, age 80, left hemisphere 44.2
2620 Female, age 94, left hemisphere 30.0
Parahippocampal cortex
nTPM: 47.9
1850 Male, age 80, both hemispheres 59.7
2245 Female, age 91, both hemispheres 54.4
2532 Female, age 72, left hemisphere 53.1
2692 Male, age 74, both hemispheres 50.3
1990 Female, age 91, right hemisphere 49.9
1933 Female, age 85, both hemispheres 46.0
2622 Female, age 67, right hemisphere 42.4
2250 Female, age 67, right hemisphere 41.8
2693 Female, age 94, both hemispheres 41.2
2018 Male, age 76, both hemispheres 40.5
Perirhinal gyrus
nTPM: 46.7
1847 Female, age 91, left hemisphere 51.1
1794 Male, age 80, right hemisphere 48.8
1841 Female, age 85, right hemisphere 48.3
2848 Male, age 76, right hemisphere 42.7
2521 Female, age 94, right hemisphere 42.5
Subiculum
nTPM: 54.3
2438 Female, age 94, left hemisphere 74.0
1901 Male, age 80, both hemispheres 65.2
1977 Female, age 85, both hemispheres 52.0
2042 Male, age 76, both hemispheres 51.3
2619 Male, age 74, both hemispheres 49.1
2729 Female, age 91, right hemisphere 34.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 13.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.5
Samples: 197

Max nTPM: 27.6
Min nTPM: 2.6
Std nTPM: 5.0
Median nTPM: 12.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 27.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 26.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 26.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 25.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 25.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 25.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 24.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 24.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 24.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 24.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 23.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 30.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.8
FF:10169-103B7 60 years, female 33.2
FF:10153-102I9 76 years, female 28.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 80.1
Pig sample Sample description nTPM
Subiculum
nTPM: 55.4
Samples: 4

Max nTPM: 66.4
Min nTPM: 51.3
Sample A Female 66.4
Sample B Female 51.7
Sample C Male 52.0
Sample D Male 51.3
Dorsal hippocampus
nTPM: 80.2
Samples: 4

Max nTPM: 106.0
Min nTPM: 50.8
Sample A Female 106.0
Sample B Female 69.0
Sample C Male 94.8
Sample D Male 50.8
Entorhinal cortex
nTPM: 64.1
Samples: 4

Max nTPM: 76.1
Min nTPM: 58.0
Sample A Female 63.0
Sample B Female 76.1
Sample C Male 58.0
Sample D Male 59.4
Ventral hippocampus
nTPM: 59.6
Samples: 4

Max nTPM: 69.7
Min nTPM: 47.0
Sample A Female 66.3
Sample B Female 47.0
Sample C Male 55.4
Sample D Male 69.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 38.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.6
Samples: 4

Max nTPM: 33.9
Min nTPM: 29.6
Sample A Male 31.6
Sample B Male 31.4
Sample C Female 33.9
Sample D Female 29.6
Hippocampal formation
nTPM: 38.2
Samples: 4

Max nTPM: 43.9
Min nTPM: 32.4
Sample A Male 32.4
Sample B Male 37.1
Sample C Female 39.5
Sample D Female 43.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
68911013 Antisense, RP_050203_02_E12, Mouse strain C57BL/6J (56 days, male) 1.7

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