HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:16.6 nTPM
HPA Brain:39.7 nTPM
GTEx:16.6 nTPM
FANTOM5:49.1 Scaled Tags Per Million
Pig:13.0 nTPM
Mouse:13.3 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 39.7
Sample id Sample description nTPM
Hippocampus
nTPM: 28.2
1911 Female, age 85, right hemisphere 36.2
2529 Female, age 94, left hemisphere 31.7
2621 Female, age 67, right hemisphere 30.2
2148 Female, age 91, left hemisphere 27.4
1898 Male, age 80, left hemisphere 24.2
1855 Male, age 76, left hemisphere 19.6
Dentate gyrus
nTPM: 31.7
2530 Female, age 94, left hemisphere 42.5
2528 Male, age 74, both hemispheres 32.8
2010 Male, age 76, both hemispheres 30.5
2531 Female, age 67, both hemispheres 29.5
2246 Female, age 85, both hemispheres 29.4
1927 Female, age 91, both hemispheres 25.3
Entorhinal gyrus
nTPM: 32.0
2117 Female, age 91, right hemisphere 50.2
2764 Male, age 80, right hemisphere 40.0
2686 Male, age 75, right hemisphere 27.9
2613 Female, age 94, left hemisphere 25.8
1787 Male, age 76, left hemisphere 24.1
1938 Female, age 85, left hemisphere 23.9
Hippocampus, CA1
nTPM: 25.1
1873 Female, age 85, both hemispheres 30.3
2082 Female, age 91, right hemisphere 29.1
2527 Male, age 74, both hemispheres 24.3
2045 Male, age 76, both hemispheres 22.0
2749 Male, age 80, left hemisphere 19.7
Hippocampus, CA2
nTPM: 30.4
1940 Female, age 85, left hemisphere 35.5
1963 Male, age 80, left hemisphere 34.9
2249 Male, age 74, both hemispheres 32.7
2113 Female, age 91, right hemisphere 31.4
2437 Female, age 94, left hemisphere 27.5
1892 Male, age 76, both hemispheres 20.3
Hippocampus, CA3
nTPM: 29.4
1891 Female, age 85, both hemispheres 44.6
2620 Female, age 94, left hemisphere 40.5
1867 Male, age 76, both hemispheres 30.5
2436 Male, age 74, both hemispheres 27.3
2137 Male, age 80, left hemisphere 17.8
2861 Female, age 67, both hemispheres 15.6
Parahippocampal cortex
nTPM: 26.1
2532 Female, age 72, left hemisphere 36.0
1990 Female, age 91, right hemisphere 35.9
2692 Male, age 74, both hemispheres 35.5
2018 Male, age 76, both hemispheres 31.6
2245 Female, age 91, both hemispheres 26.0
1933 Female, age 85, both hemispheres 25.1
1850 Male, age 80, both hemispheres 22.6
2693 Female, age 94, both hemispheres 19.4
2250 Female, age 67, right hemisphere 17.5
2622 Female, age 67, right hemisphere 11.2
Perirhinal gyrus
nTPM: 18.5
2521 Female, age 94, right hemisphere 21.4
1794 Male, age 80, right hemisphere 20.7
2848 Male, age 76, right hemisphere 20.7
1847 Female, age 91, left hemisphere 16.1
1841 Female, age 85, right hemisphere 13.8
Subiculum
nTPM: 39.7
2042 Male, age 76, both hemispheres 53.3
1901 Male, age 80, both hemispheres 47.3
1977 Female, age 85, both hemispheres 39.1
2619 Male, age 74, both hemispheres 34.4
2729 Female, age 91, right hemisphere 32.9
2438 Female, age 94, left hemisphere 31.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 16.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.6
Samples: 197

Max nTPM: 50.2
Min nTPM: 4.2
Std nTPM: 8.8
Median nTPM: 14.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 50.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 49.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 49.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 46.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 38.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 37.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 36.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 35.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 35.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 35.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 33.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 49.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.1
FF:10169-103B7 60 years, female 54.0
FF:10153-102I9 76 years, female 44.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 13.0
Pig sample Sample description nTPM
Subiculum
nTPM: 7.0
Samples: 4

Max nTPM: 8.0
Min nTPM: 5.8
Sample A Female 8.0
Sample B Female 7.5
Sample C Male 6.5
Sample D Male 5.8
Dorsal hippocampus
nTPM: 13.0
Samples: 4

Max nTPM: 15.6
Min nTPM: 10.3
Sample A Female 14.8
Sample B Female 11.1
Sample C Male 15.6
Sample D Male 10.3
Entorhinal cortex
nTPM: 7.7
Samples: 4

Max nTPM: 8.3
Min nTPM: 6.9
Sample A Female 7.4
Sample B Female 8.3
Sample C Male 8.3
Sample D Male 6.9
Ventral hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 12.6
Min nTPM: 7.8
Sample A Female 9.9
Sample B Female 7.8
Sample C Male 12.6
Sample D Male 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 13.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 11.5
Min nTPM: 9.9
Sample A Male 11.5
Sample B Male 9.9
Sample C Female 10.4
Sample D Female 11.0
Hippocampal formation
nTPM: 13.3
Samples: 4

Max nTPM: 19.2
Min nTPM: 8.4
Sample A Male 8.4
Sample B Male 13.1
Sample C Female 19.2
Sample D Female 12.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
385780 Antisense, RP_040625_01_E08, Mouse strain C57BL/6J (56 days, male) 5.3
71836801 Antisense, RP_051017_02_A07, Mouse strain C57BL/6J (56 days, male) 5.2

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