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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
12.1
nTPM
HPA Brain:
43.9
nTPM
GTEx:
12.1
nTPM
FANTOM5:
39.2
Scaled Tags Per Million
Pig:
8.9
nTPM
Mouse:
11.0
nTPM
Allen mouse:
3.9
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
43.9
Sample id
Sample description
nTPM
Amygdala nTPM: 30.4
2814
Male, age 76, right hemisphere
34.7
2514
Male, age 75, right hemisphere
32.4
2695
Female, age 67, right hemisphere
31.9
2517
Female, age 94, left hemisphere
31.1
1987
Female, age 91, left hemisphere
22.1
Basal amygdala nTPM: 32.7
2827
Female, age 67, right hemisphere
50.2
2685
Female, age 94, left hemisphere
39.8
1955
Male, age 76, both hemispheres
31.3
2110
Male, age 80, left hemisphere
28.4
2609
Male, age 75, right hemisphere
26.1
2243
Female, age 91, right hemisphere
20.1
Central amygdala nTPM: 33.9
2826
Female, age 94, left hemisphere
51.1
2701
Female, age 91, right hemisphere
35.1
2239
Male, age 80, left hemisphere
30.0
1905
Male, age 76, both hemispheres
29.2
2515
Male, age 75, right hemisphere
24.3
Corticomedial amygdala nTPM: 23.0
2535
Female, age 67, right hemisphere
30.0
2429
Female, age 94, left hemisphere
25.5
2428
Male, age 75, right hemisphere
24.6
2240
Male, age 76, both hemispheres
21.7
2829
Male, age 80, left hemisphere
21.3
2242
Female, age 91, right hemisphere
15.2
Lateral amygdala nTPM: 43.9
2534
Female, age 94, left hemisphere
58.3
2830
Female, age 67, right hemisphere
56.1
2256
Male, age 80, left hemisphere
43.6
2516
Male, age 75, right hemisphere
38.7
2255
Female, age 91, right hemisphere
36.2
1883
Male, age 76, both hemispheres
30.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
12.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 12.1
Samples: 152
Max nTPM: 37.0
Min nTPM: 1.8
Std nTPM: 5.0
Median nTPM: 11.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
37.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
27.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
25.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
24.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
22.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
22.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
21.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
21.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
21.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
20.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
20.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
19.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
19.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
18.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
18.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
18.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
18.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
18.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
17.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
17.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
17.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
16.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
16.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
16.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
16.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
16.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
16.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
15.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
15.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
15.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
15.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
15.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
14.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
14.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
14.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
14.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
14.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
14.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
14.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
14.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
14.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
13.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
13.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
13.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
13.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
13.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
13.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
13.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
13.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
13.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
13.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
13.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
13.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
12.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
12.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
12.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
12.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
12.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
12.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
12.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
12.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
12.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
12.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
12.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
12.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
12.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
12.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
12.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
11.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
11.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
11.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
11.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
11.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
11.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
11.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
11.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
11.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
11.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
11.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
11.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
11.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
11.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
11.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
10.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
10.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
10.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
10.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
10.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
10.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
10.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
10.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
10.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
10.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
10.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
10.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
10.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
10.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
10.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
10.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
9.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
9.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
9.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
9.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
9.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
9.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
9.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
9.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
9.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
9.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
9.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
9.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
9.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
8.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
8.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
8.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
8.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
8.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
8.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
8.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
8.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
8.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
8.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
8.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
8.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
7.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
7.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
7.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
7.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
7.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
7.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
7.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
7.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
7.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
7.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
7.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
7.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
7.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
7.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
6.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
6.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
6.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
5.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
5.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
5.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
4.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
4.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
4.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
4.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
4.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
3.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
2.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
11.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 11.0
Samples: 4
Max nTPM: 11.6
Min nTPM: 9.7
Sample A
Male
11.2
Sample B
Male
9.7
Sample C
Female
11.6
Sample D
Female
11.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
