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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CTNND1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
147.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
100.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
99.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
99.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
94.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
90.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
87.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
86.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
85.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
81.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
80.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
71.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
71.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
71.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
70.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
69.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
67.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
67.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
66.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
66.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
63.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
61.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
60.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
58.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
58.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
57.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
57.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
55.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
54.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
49.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
49.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
48.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
48.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
47.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
46.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
45.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
45.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
45.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
44.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
44.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
43.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
41.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
41.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
38.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
38.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
38.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
37.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
36.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
35.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
35.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
35.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
35.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
34.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
33.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
33.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
33.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
28.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
27.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
26.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
25.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
25.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
20.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
18.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CTNND1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
79.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
225.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
200.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
191.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
182.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
177.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
169.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
166.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
163.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
162.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
160.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
159.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
151.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
151.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
151.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
151.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
149.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
149.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
148.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
148.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
147.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
146.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
146.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
141.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
137.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
137.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
136.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
136.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
136.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
136.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
135.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
135.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
134.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
133.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
132.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
132.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
131.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
130.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
130.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
129.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
129.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
129.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
129.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
128.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
128.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
127.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
127.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
127.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
126.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
126.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
126.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
125.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
125.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
124.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
124.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
123.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
123.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
123.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
123.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
122.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
122.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
121.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
121.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
121.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
120.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
120.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
120.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
120.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
120.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
120.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
119.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
118.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
117.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
117.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
117.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
116.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
116.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
115.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
115.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
114.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
114.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
114.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
114.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
113.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
113.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
112.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
112.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
112.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
112.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
112.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
111.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
111.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
111.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
110.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
109.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
109.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
109.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
109.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
109.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
108.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
108.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
108.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
108.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
108.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
108.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
108.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
108.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
107.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
107.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
107.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
107.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
106.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
106.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
106.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
106.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
106.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
106.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
106.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
105.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
105.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
105.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
105.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
104.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
104.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
104.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
104.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
104.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
104.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
102.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
102.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
102.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
102.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
102.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
102.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
102.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
101.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
101.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
101.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
101.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
101.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
101.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
100.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
100.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
100.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
100.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
100.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
99.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
99.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
99.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
98.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
98.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
98.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
97.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
97.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
97.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
97.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
96.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
96.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
96.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
96.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
96.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
96.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
95.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
95.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
95.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
95.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
95.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
94.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
94.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
94.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
94.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
94.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
94.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
94.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
94.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
94.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
94.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
93.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
93.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
93.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
93.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
93.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
92.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
92.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
92.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
92.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
91.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
91.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
90.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
90.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
90.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
90.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
90.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
90.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
89.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
89.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
89.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
88.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
88.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
88.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
88.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
88.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
88.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
88.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
88.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
88.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
87.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
87.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
87.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
87.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
87.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
87.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
87.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
86.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
86.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
86.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
86.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
85.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
85.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
85.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
85.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
85.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
85.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
85.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
84.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
84.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
84.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
84.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
83.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
83.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
83.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
83.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
83.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
82.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
82.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
82.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
82.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
82.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
82.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
81.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
81.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
81.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
81.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
81.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
81.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
80.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
80.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
79.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
79.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
79.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
79.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
79.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
79.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
79.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
79.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
78.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
78.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
78.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
78.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
78.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
77.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
77.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
77.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
77.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
77.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
77.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
76.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
76.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
76.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
76.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
76.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
76.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
76.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
76.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
75.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
75.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
75.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
75.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
75.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
75.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
74.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
74.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
74.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
74.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
74.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
74.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
73.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
73.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
73.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
73.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
73.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
73.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
73.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
72.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
72.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
72.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
72.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
72.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
72.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
72.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
72.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
71.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
71.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
71.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
70.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
70.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
69.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
69.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
69.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
69.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
69.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
69.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
69.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
69.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
68.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
68.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
68.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
68.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
68.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
68.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
68.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
67.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
67.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
67.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
67.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
66.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
66.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
66.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
66.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
66.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
66.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
65.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
65.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
65.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
65.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
64.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
64.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
64.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
64.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
63.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
63.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
63.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
63.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
63.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
63.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
62.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
62.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
62.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
62.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
62.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
62.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
61.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
61.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
61.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
60.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
60.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
60.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
59.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
59.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
58.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
58.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
58.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
58.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
58.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
58.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
57.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
57.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
57.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
57.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
57.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
57.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
57.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
56.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
56.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
56.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
56.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
56.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
56.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
56.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
55.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
55.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
55.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
55.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
55.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
54.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
54.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
54.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
54.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
54.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
54.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
53.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
53.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
53.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
53.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
52.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
52.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
51.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
51.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
51.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
51.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
50.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
50.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
50.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
50.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
49.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
49.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
49.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
49.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
49.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
48.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
48.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
48.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
48.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
48.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
48.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
47.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
47.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
47.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
47.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
47.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
47.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
46.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
46.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
46.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
46.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
45.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
45.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
45.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
45.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
45.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
44.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
44.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
44.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
44.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
43.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
42.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
42.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
41.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
41.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
41.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
40.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
40.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
40.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
40.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
39.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
39.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
39.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
39.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
38.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
38.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
38.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
38.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
38.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
37.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
37.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
37.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
37.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
37.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
37.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
36.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
36.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
36.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
36.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
36.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
36.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
35.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
35.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
35.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
35.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
35.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
34.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
34.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
34.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
33.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
33.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
33.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
32.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
32.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
32.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
32.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
32.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
31.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
31.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
31.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
30.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
30.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
30.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
30.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
30.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
30.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
30.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
29.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
29.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
28.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
28.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
27.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
27.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
26.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
26.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
26.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
26.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
26.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
25.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
25.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
25.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
24.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
23.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
23.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
22.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
21.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
19.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
19.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
19.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
19.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
18.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
17.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
17.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
15.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CTNND1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
92.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
189.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
165.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
162.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
156.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
150.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
147.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
146.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
143.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
142.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
141.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
138.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
137.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
134.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
130.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
130.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
129.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
127.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
127.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
127.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
126.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
125.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
118.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
117.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
117.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
116.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
112.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
110.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
109.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
109.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
108.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
107.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
106.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
105.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
103.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
100.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
99.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
98.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
98.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
97.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
94.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
94.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
94.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
94.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
94.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
92.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
92.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
92.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
92.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
92.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
91.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
91.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
89.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
88.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
88.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
86.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
85.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
83.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
82.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
81.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
81.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
80.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
77.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
77.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
77.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
77.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
75.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
75.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
73.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
72.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
71.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
71.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
69.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
69.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
68.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
68.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
68.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
67.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
66.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
66.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
65.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
63.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
62.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
62.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
60.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
60.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
59.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
59.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
59.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
55.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
51.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
50.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
49.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
46.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
44.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
44.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
39.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
35.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
34.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
26.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CTNND1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
205.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
172.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
154.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
136.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
134.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
125.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
124.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
110.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
109.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
109.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
105.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
103.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
103.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
101.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
101.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
99.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
99.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
99.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
96.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
95.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
91.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
91.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
88.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
87.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
87.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
86.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
85.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
85.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
83.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
83.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
83.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
83.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
82.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
82.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
81.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
81.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
81.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
80.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
80.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
79.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
76.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
76.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
76.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
75.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
75.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
74.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
74.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
73.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
72.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
72.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
71.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
71.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
71.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
71.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
71.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
71.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
69.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
68.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
67.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
66.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
66.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
66.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
66.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
66.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
65.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
64.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
64.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
64.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
63.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
62.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
62.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
61.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
61.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
60.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
60.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
60.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
60.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
60.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
60.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
59.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
59.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
59.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
59.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
58.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
58.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
58.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
58.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
58.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
58.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
58.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
58.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
57.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
57.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
56.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
56.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
56.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
56.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
56.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
56.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
55.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
55.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
55.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
55.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
55.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
55.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
54.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
54.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
53.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
53.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
53.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
53.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
52.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
51.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
51.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
51.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
50.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
50.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
50.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
50.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
49.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
49.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
49.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
49.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
49.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
49.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
48.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
48.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
48.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
48.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
47.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
47.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
47.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
46.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
46.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
46.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
46.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
46.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
46.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
46.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
46.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
45.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
45.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
45.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
45.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
44.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
44.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
43.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
43.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
43.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
43.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
42.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
42.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
41.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
41.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
41.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
41.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
41.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
41.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
41.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
40.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
40.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
40.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
40.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
39.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
39.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
39.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
39.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
39.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
38.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
38.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
38.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
38.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
37.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
36.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
36.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
36.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
36.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
36.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
36.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
35.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
35.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
35.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
35.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
35.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
35.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
34.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
34.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
33.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
33.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
32.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
32.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
32.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
32.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
32.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
32.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
31.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
31.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
31.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
31.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
31.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
30.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
30.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
30.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
30.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
30.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
30.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
29.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
29.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
29.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
29.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
29.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
29.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
28.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
28.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
28.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
28.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
28.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
28.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
27.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
27.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
27.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
27.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
26.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
26.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
26.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
26.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
26.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
25.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
25.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
25.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
25.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
25.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
24.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
24.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
24.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
23.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
23.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
23.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
22.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
22.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
21.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
21.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
21.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
21.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
21.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
20.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
20.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
20.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
20.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
19.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
19.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
19.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
19.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
19.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
19.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
19.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
18.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
18.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
18.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
18.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
18.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
17.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
17.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
17.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
16.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
15.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
15.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
14.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
13.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
12.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
12.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
11.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
11.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
9.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0071150004
Tumor
0.4
CPT0092800003
Normal
0.3
CPT0006630003
Tumor
0.3
CPT0065450001
Normal
0.3
CPT0066430001
Normal
0.3
CPT0079180003
Tumor
0.3
CPT0089480003
Normal
0.3
CPT0017410003
Tumor
0.3
CPT0006950001
Normal
0.3
CPT0086950003
Tumor
0.3
CPT0009080003
Normal
0.3
CPT0025610001
Normal
0.3
CPT0012370003
Tumor
0.3
CPT0012770003
Normal
0.2
CPT0081620001
Normal
0.2
CPT0077140001
Normal
0.2
CPT0077490003
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0087050003
Normal
0.2
CPT0006730001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0077500001
Normal
0.2
CPT0007470001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0020020001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0076350001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0079000001
Normal
0.2
CPT0001540009
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0025060001
Normal
0.2
CPT0078660003
Tumor
0.2
CPT0023710001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0014130001
Normal
0.2
CPT0001350001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0007320003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0012640003
Normal
0.2
CPT0077310003
Tumor
0.2
CPT0001510001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0065810003
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0088780001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0009060003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0012920003
Normal
0.1
CPT0079300001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0006530001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0012570003
Normal
0.0
CPT0010120001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0014450004
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0081990003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0001180009
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0078800003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0023690003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0079410003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0078510003
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0075130003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0075560003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0001340003
Tumor
-0.4
CPT0076330003
Tumor
-0.5
CPT0023350003
Tumor
-0.5
CPT0011410003
Tumor
-0.5
CPT0084560003
Tumor
-0.5
CPT0088970003
Tumor
-0.7
CPT0081880003
Tumor
-0.8
CPT0088550004
Tumor
-0.8
CPT0012180003
Tumor
-1.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
