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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CTNND1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
137.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
135.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
126.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
107.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
103.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
90.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
81.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
81.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
78.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
77.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
72.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
70.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
69.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
68.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
62.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
61.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
61.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
61.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
60.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
59.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
59.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
58.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
57.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
56.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
56.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
56.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
54.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
52.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
52.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
52.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
51.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
51.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
51.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
50.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
50.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
50.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
50.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
49.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
49.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
48.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
48.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
48.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
48.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
47.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
46.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
46.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
46.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
46.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
45.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
45.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
45.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
44.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
44.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
43.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
43.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
43.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
43.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
43.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
43.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
42.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
42.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
42.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
42.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
41.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
41.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
41.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
41.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
41.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
41.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
41.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
40.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
40.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
40.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
39.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
39.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
39.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
39.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
39.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
38.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
38.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
38.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
38.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
38.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
38.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
38.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
37.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
37.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
37.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
37.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
37.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
37.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
36.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
36.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
36.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
36.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
35.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
35.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
35.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
35.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
35.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
35.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
35.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
35.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
34.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
34.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
34.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
34.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
34.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
34.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
34.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
34.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
33.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
33.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
33.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
33.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
33.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
33.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
33.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
33.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
32.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
32.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
32.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
32.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
32.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
32.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
32.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
32.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
31.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
31.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
31.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
31.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
31.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
31.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
31.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
31.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
31.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
31.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
30.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
30.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
30.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
30.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
30.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
30.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
30.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
30.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
30.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
30.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
29.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
29.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
29.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
29.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
29.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
29.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
29.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
29.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
29.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
29.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
29.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
29.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
28.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
28.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
28.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
28.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
28.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
28.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
28.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
28.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
28.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
28.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
27.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
27.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
27.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
27.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
27.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
27.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
27.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
27.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
27.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
27.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
26.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
26.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
26.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
26.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
26.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
26.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
26.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
26.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
25.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
25.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
25.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
25.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
25.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
25.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
25.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
24.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
24.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
24.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
24.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
24.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
24.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
24.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
24.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
23.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
23.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
23.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
23.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
23.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
23.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
23.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
23.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
23.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
23.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
23.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
23.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
23.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
22.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
22.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
22.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
22.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
22.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
22.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
22.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
22.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
22.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
22.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
21.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
21.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
21.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
21.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
21.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
21.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
21.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
21.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
21.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
21.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
21.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
20.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
20.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
20.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
20.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
20.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
20.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
20.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
20.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
20.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
20.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
20.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
20.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
19.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
19.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
19.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
19.5
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
19.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
19.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
19.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
19.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
19.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
19.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
19.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
19.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
19.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
19.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
19.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
19.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
18.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
18.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
18.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
18.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
18.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
18.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
18.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
18.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
18.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
17.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
17.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
17.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
17.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
17.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
17.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
17.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
17.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
17.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
17.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
16.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
16.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
16.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
16.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
16.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
16.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
16.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
16.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
16.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
16.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
16.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
15.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
15.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
15.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
15.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
15.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
15.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
15.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
15.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
15.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
14.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
14.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
14.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
14.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
13.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
13.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
13.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
13.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
13.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
13.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
13.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
13.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
12.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
12.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
12.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
12.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
12.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
12.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
11.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
11.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
11.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
11.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
11.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
11.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
11.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
11.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
11.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
10.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
10.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
10.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
10.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
10.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
10.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
9.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
9.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
9.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
9.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
9.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
9.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
8.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
8.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
8.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
8.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
7.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
7.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
7.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
7.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
6.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
6.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
6.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
6.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CTNND1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.3
Number of samples
231
Samples
Sample
Description
TPM
DO45189
0 years, female, NA, stage:2, alive, 1200 days
177.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
139.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
116.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
114.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
114.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
113.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
112.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
104.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
101.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
101.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
100.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
99.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
95.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
89.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
88.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
81.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
80.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
79.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
79.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
77.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
73.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
70.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
68.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
67.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
65.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
65.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
65.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
63.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
62.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
61.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
61.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
61.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
60.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
60.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
60.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
58.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
58.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
58.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
56.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
56.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
56.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
56.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
56.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
55.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
55.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
55.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
55.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
55.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
54.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
54.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
53.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
52.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
52.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
52.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
51.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
51.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
50.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
50.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
50.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
50.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
50.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
50.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
50.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
49.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
49.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
48.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
48.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
47.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
47.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
47.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
47.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
47.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
47.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
46.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
46.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
46.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
46.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
46.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
46.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
46.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
46.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
45.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
45.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
45.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
44.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
44.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
44.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
44.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
44.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
44.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
44.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
43.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
43.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
43.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
43.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
43.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
43.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
42.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
42.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
42.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
41.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
41.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
41.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
41.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
41.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
41.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
40.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
40.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
40.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
40.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
40.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
40.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
39.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
39.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
39.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
39.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
39.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
39.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
39.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
38.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
38.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
38.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
38.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
38.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
37.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
37.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
37.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
37.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
37.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
37.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
36.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
36.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
36.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
36.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
36.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
36.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
36.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
35.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
35.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
35.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
35.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
35.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
35.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
35.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
35.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
35.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
34.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
34.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
34.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
34.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
34.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
34.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
33.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
33.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
33.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
33.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
33.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
33.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
33.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
33.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
33.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
32.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
32.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
32.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
32.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
32.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
32.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
31.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
31.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
31.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
31.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
31.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
31.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
31.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
30.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
30.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
30.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
30.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
30.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
30.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
30.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
30.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
29.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
29.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
29.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
29.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
29.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
29.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
28.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
28.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
28.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
28.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
28.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
27.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
27.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
27.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
27.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
27.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
26.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
26.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
26.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
26.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
25.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
25.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
25.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
24.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
24.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
24.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
23.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
22.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
21.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
21.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
20.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
20.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
19.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
19.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
19.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
18.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
17.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
17.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
16.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
15.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
15.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
15.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
15.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
12.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
12.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
11.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
10.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
8.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
7.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
635
Tumor
0.6
221
Tumor
0.6
921
Tumor
0.6
737
Tumor
0.5
413
Tumor
0.5
271
Tumor
0.5
817
Tumor
0.5
425
Tumor
0.5
975
Tumor
0.4
955
Tumor
0.4
341
Tumor
0.4
465
Tumor
0.4
878
Normal
0.4
1031
Tumor
0.4
636
Normal
0.4
1028
Normal
0.4
937
Tumor
0.4
426
Normal
0.3
488
Normal
0.3
471
Tumor
0.3
124
Normal
0.3
944
Normal
0.3
777
Tumor
0.3
968
Normal
0.3
778
Normal
0.3
723
Tumor
0.3
112
Tumor
0.3
554
Normal
0.3
746
Normal
0.3
527
Tumor
0.3
484
Normal
0.3
128
Normal
0.3
958
Normal
0.3
728
Normal
0.3
696
Normal
0.3
727
Tumor
0.3
924
Normal
0.3
954
Normal
0.3
742
Normal
0.3
918
Normal
0.3
298
Normal
0.3
142
Normal
0.3
616
Normal
0.3
964
Normal
0.3
1022
Normal
0.3
448
Normal
0.3
344
Normal
0.3
422
Normal
0.3
618
Normal
0.3
698
Normal
0.3
648
Normal
0.3
738
Normal
0.3
564
Normal
0.3
824
Normal
0.3
222
Normal
0.3
452
Normal
0.3
472
Normal
0.3
534
Normal
0.3
938
Normal
0.2
1032
Normal
0.2
1045
Tumor
0.2
641
Tumor
0.2
482
Normal
0.2
1016
Normal
0.2
232
Normal
0.2
922
Normal
0.2
686
Normal
0.2
695
Tumor
0.2
911
Tumor
0.2
984
Normal
0.2
744
Normal
0.2
786
Normal
0.2
131
Tumor
0.2
882
Normal
0.2
462
Normal
0.2
392
Normal
0.2
286
Normal
0.2
1014
Normal
0.2
328
Normal
0.2
526
Normal
0.2
218
Normal
0.2
464
Normal
0.2
474
Normal
0.2
982
Normal
0.2
568
Normal
0.2
468
Normal
0.2
874
Normal
0.2
477
Tumor
0.2
416
Normal
0.2
714
Normal
0.2
642
Normal
0.2
912
Normal
0.2
546
Normal
0.2
498
Normal
0.2
284
Normal
0.2
952
Normal
0.2
1026
Normal
0.2
862
Normal
0.2
111
Normal
0.2
956
Normal
0.2
396
Normal
0.2
513
Tumor
0.2
884
Normal
0.2
914
Normal
0.2
214
Normal
0.2
913
Tumor
0.2
376
Normal
0.2
196
Normal
0.2
518
Normal
0.2
873
Tumor
0.2
864
Normal
0.2
132
Normal
0.2
436
Normal
0.2
553
Tumor
0.2
412
Normal
0.2
574
Normal
0.2
356
Normal
0.2
466
Normal
0.2
647
Tumor
0.2
528
Normal
0.2
258
Normal
0.2
494
Normal
0.2
816
Normal
0.2
342
Normal
0.2
866
Normal
0.2
228
Normal
0.2
481
Tumor
0.2
617
Tumor
0.2
354
Normal
0.2
858
Normal
0.2
926
Normal
0.2
881
Tumor
0.2
352
Normal
0.2
456
Normal
0.2
443
Tumor
0.2
114
Normal
0.2
756
Normal
0.2
285
Tumor
0.2
414
Normal
0.2
627
Tumor
0.2
545
Tumor
0.2
327
Tumor
0.2
538
Normal
0.2
755
Tumor
0.2
415
Tumor
0.2
558
Normal
0.2
1042
Normal
0.2
364
Normal
0.2
572
Normal
0.2
388
Normal
0.2
628
Normal
0.2
1025
Tumor
0.2
852
Normal
0.2
478
Normal
0.2
722
Normal
0.1
666
Normal
0.1
916
Normal
0.1
516
Normal
0.1
1021
Tumor
0.1
368
Normal
0.1
421
Tumor
0.1
868
Normal
0.1
515
Tumor
0.1
672
Normal
0.1
268
Normal
0.1
493
Tumor
0.1
386
Normal
0.1
212
Normal
0.1
492
Normal
0.1
976
Normal
0.1
715
Tumor
0.1
387
Tumor
0.1
137
Tumor
0.1
267
Tumor
0.1
966
Normal
0.1
818
Normal
0.1
362
Normal
0.1
358
Normal
0.1
716
Normal
0.1
1046
Normal
0.1
138
Normal
0.1
424
Normal
0.1
186
Normal
0.1
446
Normal
0.1
785
Tumor
0.1
863
Tumor
0.1
445
Tumor
0.1
127
Tumor
0.1
951
Tumor
0.1
312
Normal
0.1
162
Normal
0.1
857
Tumor
0.1
195
Tumor
0.1
664
Normal
0.1
331
Tumor
0.1
366
Normal
0.1
278
Normal
0.1
447
Tumor
0.1
262
Normal
0.1
925
Tumor
0.1
743
Tumor
0.1
148
Normal
0.1
745
Tumor
0.1
432
Normal
0.1
353
Tumor
0.1
126
Normal
0.1
536
Normal
0.1
1044
Normal
0.1
524
Normal
0.1
662
Normal
0.1
1027
Tumor
0.1
171
Tumor
0.1
147
Tumor
0.1
113
Tumor
0.1
514
Normal
0.1
394
Normal
0.1
393
Tumor
0.1
563
Tumor
0.1
314
Normal
0.1
272
Normal
0.0
615
Tumor
0.0
978
Normal
0.0
428
Normal
0.0
963
Tumor
0.0
1041
Tumor
0.0
332
Normal
0.0
483
Tumor
0.0
557
Tumor
0.0
977
Tumor
0.0
136
Normal
0.0
224
Normal
0.0
455
Tumor
0.0
217
Tumor
0.0
123
Tumor
0.0
697
Tumor
0.0
384
Normal
0.0
685
Tumor
0.0
363
Tumor
0.0
487
Tumor
0.0
427
Tumor
0.0
146
Normal
0.0
423
Tumor
0.0
533
Tumor
0.0
461
Tumor
0.0
192
Normal
0.0
741
Tumor
0.0
172
Normal
0.0
161
Tumor
0.0
444
Normal
0.0
188
Normal
0.0
523
Tumor
0.0
433
Tumor
0.0
435
Tumor
0.0
357
Tumor
-0.1
365
Tumor
-0.1
671
Tumor
-0.1
411
Tumor
-0.1
434
Normal
-0.1
391
Tumor
-0.1
497
Tumor
-0.1
361
Tumor
-0.1
185
Tumor
-0.1
823
Tumor
-0.1
713
Tumor
-0.1
517
Tumor
-0.1
463
Tumor
-0.1
721
Tumor
-0.1
953
Tumor
-0.1
297
Tumor
-0.1
145
Tumor
-0.1
277
Tumor
-0.1
865
Tumor
-0.1
813
Tumor
-0.1
981
Tumor
-0.1
815
Tumor
-0.1
967
Tumor
-0.1
917
Tumor
-0.1
135
Tumor
-0.1
867
Tumor
-0.2
1043
Tumor
-0.2
261
Tumor
-0.2
223
Tumor
-0.2
451
Tumor
-0.2
851
Tumor
-0.2
367
Tumor
-0.2
525
Tumor
-0.2
467
Tumor
-0.2
814
Normal
-0.2
861
Tumor
-0.2
141
Tumor
-0.2
187
Tumor
-0.2
227
Tumor
-0.2
191
Tumor
-0.2
313
Tumor
-0.2
1015
Tumor
-0.2
395
Tumor
-0.3
537
Tumor
-0.3
213
Tumor
-0.3
943
Tumor
-0.3
877
Tumor
-0.3
883
Tumor
-0.3
431
Tumor
-0.3
257
Tumor
-0.3
923
Tumor
-0.3
665
Tumor
-0.3
1013
Tumor
-0.3
957
Tumor
-0.3
385
Tumor
-0.3
211
Tumor
-0.3
915
Tumor
-0.3
311
Tumor
-0.3
491
Tumor
-0.3
343
Tumor
-0.4
663
Tumor
-0.4
355
Tumor
-0.4
571
Tumor
-0.4
375
Tumor
-0.4
383
Tumor
-0.4
231
Tumor
-0.4
983
Tumor
-0.5
125
Tumor
-0.5
535
Tumor
-0.5
965
Tumor
-0.5
283
Tumor
-0.5
661
Tumor
-0.6
473
Tumor
-0.6
351
Tumor
-0.6
567
Tumor
-0.7
573
Tumor
-0.7
724
Normal
-1.0
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
