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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ASPH is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
325.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
289.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
159.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
149.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
135.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
124.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
122.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
120.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
118.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
115.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
113.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
110.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
103.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
75.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
71.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
68.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
60.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
59.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
59.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
52.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
51.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
50.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
47.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
46.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
46.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
46.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
45.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
40.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
39.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
38.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
38.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
38.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
37.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
37.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
35.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
34.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
34.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
34.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
34.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
30.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
29.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
28.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
26.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
25.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
25.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
24.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
23.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
23.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
22.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
21.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
18.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
18.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
16.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
16.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
14.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
13.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
12.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
12.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
11.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ASPH is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
73.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
663.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
560.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
322.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
303.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
303.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
240.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
239.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
209.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
203.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
197.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
194.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
184.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
177.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
176.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
171.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
170.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
164.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
156.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
156.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
153.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
149.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
148.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
147.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
147.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
146.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
144.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
141.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
140.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
137.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
137.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
135.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
134.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
129.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
128.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
128.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
127.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
127.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
126.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
126.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
126.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
124.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
123.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
123.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
122.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
120.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
120.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
119.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
118.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
118.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
118.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
118.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
118.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
118.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
117.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
116.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
116.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
116.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
114.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
113.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
113.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
112.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
112.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
110.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
110.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
110.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
110.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
109.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
109.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
109.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
107.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
107.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
107.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
106.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
106.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
106.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
104.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
104.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
103.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
103.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
103.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
103.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
103.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
103.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
102.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
101.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
101.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
100.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
100.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
100.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
100.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
100.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
99.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
98.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
98.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
98.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
98.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
97.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
97.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
97.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
96.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
96.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
96.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
95.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
95.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
95.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
95.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
95.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
94.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
94.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
93.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
93.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
92.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
92.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
92.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
92.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
92.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
91.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
90.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
90.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
90.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
90.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
90.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
90.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
89.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
89.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
89.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
89.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
88.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
88.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
88.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
88.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
87.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
87.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
87.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
87.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
87.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
87.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
86.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
86.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
85.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
85.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
85.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
85.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
85.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
85.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
85.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
85.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
85.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
85.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
85.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
85.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
85.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
84.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
84.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
84.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
84.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
84.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
84.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
83.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
83.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
83.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
83.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
83.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
83.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
83.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
82.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
82.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
82.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
82.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
81.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
81.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
81.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
81.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
81.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
81.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
80.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
80.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
80.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
80.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
80.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
80.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
80.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
80.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
80.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
79.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
79.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
78.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
78.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
78.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
78.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
78.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
77.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
77.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
77.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
76.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
76.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
76.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
76.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
76.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
76.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
76.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
76.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
76.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
75.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
75.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
75.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
74.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
74.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
74.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
73.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
73.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
73.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
73.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
73.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
73.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
72.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
72.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
72.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
72.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
72.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
72.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
72.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
72.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
72.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
71.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
71.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
71.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
71.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
71.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
71.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
70.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
70.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
70.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
70.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
69.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
69.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
69.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
69.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
69.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
69.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
69.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
69.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
69.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
68.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
68.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
68.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
68.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
68.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
68.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
68.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
68.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
68.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
68.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
68.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
68.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
67.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
67.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
67.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
67.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
67.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
67.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
67.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
67.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
67.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
66.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
66.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
66.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
66.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
66.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
66.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
66.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
66.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
66.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
66.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
65.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
65.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
65.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
65.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
65.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
65.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
64.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
64.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
64.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
64.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
63.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
63.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
63.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
63.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
62.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
62.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
62.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
62.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
62.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
62.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
62.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
62.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
61.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
61.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
61.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
61.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
61.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
60.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
60.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
60.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
60.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
59.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
59.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
59.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
59.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
59.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
59.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
59.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
59.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
59.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
59.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
58.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
58.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
58.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
58.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
58.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
58.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
58.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
57.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
57.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
57.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
57.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
57.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
57.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
57.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
56.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
56.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
56.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
56.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
56.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
56.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
55.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
55.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
55.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
55.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
55.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
55.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
54.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
54.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
54.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
54.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
54.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
53.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
53.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
53.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
53.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
53.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
52.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
52.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
52.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
52.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
52.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
52.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
51.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
51.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
50.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
50.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
50.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
50.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
50.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
50.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
49.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
49.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
49.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
49.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
49.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
49.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
48.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
48.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
48.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
48.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
48.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
48.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
47.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
47.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
47.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
47.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
47.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
47.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
47.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
47.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
46.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
46.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
46.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
46.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
45.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
45.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
44.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
44.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
44.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
44.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
44.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
43.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
43.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
43.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
43.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
43.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
42.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
42.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
42.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
42.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
41.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
41.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
41.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
40.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
40.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
40.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
40.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
39.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
39.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
38.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
38.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
38.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
38.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
38.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
38.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
37.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
37.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
37.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
36.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
36.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
36.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
35.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
35.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
35.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
35.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
34.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
34.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
34.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
34.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
34.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
33.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
33.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
33.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
33.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
33.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
33.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
33.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
32.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
32.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
32.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
32.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
31.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
31.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
31.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
30.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
30.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
29.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
29.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
29.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
29.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
29.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
29.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
28.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
28.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
28.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
28.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
28.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
28.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
27.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
27.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
26.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
26.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
26.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
25.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
25.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
25.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
25.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
25.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
25.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
25.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
25.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
24.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
24.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
23.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
23.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
23.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
23.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
23.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
23.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
21.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
21.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
21.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
20.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
19.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
19.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
19.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
19.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
18.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
18.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
18.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
18.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
17.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
17.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
16.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
16.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
15.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
14.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
13.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ASPH is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
102.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
327.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
238.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
206.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
189.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
183.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
182.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
178.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
176.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
168.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
160.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
158.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
157.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
148.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
146.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
141.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
141.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
137.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
136.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
136.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
134.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
134.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
134.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
134.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
129.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
129.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
125.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
125.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
124.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
117.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
114.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
112.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
111.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
109.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
109.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
108.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
107.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
106.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
104.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
104.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
104.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
103.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
102.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
100.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
99.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
99.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
99.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
98.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
98.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
97.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
97.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
96.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
96.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
95.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
93.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
92.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
92.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
91.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
91.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
89.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
88.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
88.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
87.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
86.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
85.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
84.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
84.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
82.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
81.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
80.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
76.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
74.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
73.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
72.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
69.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
69.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
68.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
67.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
66.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
64.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
63.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
63.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
61.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
60.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
60.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
57.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
55.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
53.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
53.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
52.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
51.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
50.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
50.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
49.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
47.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
47.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
45.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
43.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
36.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
32.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ASPH is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
562.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
271.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
270.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
262.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
235.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
232.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
225.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
216.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
213.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
206.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
203.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
201.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
200.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
200.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
196.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
181.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
177.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
176.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
172.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
165.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
165.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
161.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
148.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
148.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
142.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
142.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
133.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
131.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
127.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
119.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
103.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
103.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
98.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
95.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
93.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
93.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
92.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
91.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
88.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
88.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
86.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
86.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
84.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
83.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
83.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
83.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
82.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
80.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
79.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
78.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
77.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
77.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
76.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
76.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
75.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
74.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
73.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
70.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
70.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
70.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
70.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
69.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
68.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
68.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
67.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
67.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
66.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
66.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
65.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
65.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
64.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
64.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
63.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
62.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
61.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
61.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
61.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
60.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
59.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
58.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
58.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
58.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
57.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
57.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
57.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
56.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
56.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
56.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
56.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
55.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
55.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
55.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
55.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
55.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
54.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
53.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
53.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
52.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
52.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
52.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
51.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
51.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
50.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
50.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
50.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
50.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
49.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
48.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
48.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
48.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
48.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
48.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
48.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
47.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
47.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
47.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
46.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
46.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
45.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
45.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
45.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
45.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
44.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
44.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
44.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
44.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
44.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
43.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
43.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
43.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
42.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
41.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
40.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
40.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
40.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
40.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
39.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
39.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
39.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
39.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
38.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
38.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
38.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
38.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
37.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
37.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
37.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
37.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
37.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
37.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
37.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
37.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
37.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
37.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
36.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
36.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
36.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
36.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
36.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
36.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
35.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
35.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
35.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
34.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
34.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
34.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
34.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
34.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
34.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
34.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
34.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
33.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
33.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
33.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
33.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
33.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
33.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
32.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
32.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
32.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
32.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
31.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
31.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
31.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
31.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
30.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
29.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
29.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
29.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
29.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
29.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
29.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
29.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
29.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
28.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
28.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
28.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
28.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
28.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
28.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
27.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
27.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
27.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
26.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
26.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
26.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
26.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
26.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
25.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
25.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
25.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
25.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
25.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
24.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
24.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
24.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
24.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
23.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
23.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
23.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
23.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
23.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
22.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
22.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
22.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
22.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
22.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
21.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
21.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
21.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
20.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
20.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
20.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
20.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
19.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
19.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
19.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
19.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
18.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
17.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
16.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
16.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
15.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
15.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
14.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
13.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
13.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
13.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
13.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
13.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
12.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
12.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
11.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
11.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
10.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
10.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
10.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
5.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
1.8
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0081880003
Tumor
2.5
CPT0001340003
Tumor
2.2
CPT0086950003
Tumor
1.4
CPT0012550003
Tumor
1.3
CPT0023350003
Tumor
1.2
CPT0001180009
Tumor
1.1
CPT0025110003
Tumor
1.0
CPT0075130003
Tumor
0.9
CPT0079270003
Tumor
0.9
CPT0086820003
Tumor
0.8
CPT0076330003
Tumor
0.8
CPT0002350011
Tumor
0.8
CPT0000640003
Tumor
0.7
CPT0009000003
Tumor
0.7
CPT0024670003
Tumor
0.6
CPT0025290003
Tumor
0.5
CPT0077310003
Tumor
0.5
CPT0069000003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0025230003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0012180003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0025580004
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0012080003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0064370003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0025170003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0000780007
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0088550004
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0000790001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0012370003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0069160003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0079180003
Tumor
-0.2
CPT0063640001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0026410003
Tumor
-0.2
CPT0092310003
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0081990003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0081600003
Tumor
-0.3
CPT0006950001
Normal
-0.3
CPT0006530001
Normal
-0.3
CPT0079300001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0066520001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0023360001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0010170001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0014370004
Tumor
-0.3
CPT0078660003
Tumor
-0.3
CPT0078840001
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0012900004
Tumor
-0.3
CPT0025060001
Normal
-0.3
CPT0001540009
Tumor
-0.4
CPT0015910003
Tumor
-0.4
CPT0020130001
Normal
-0.4
CPT0086830003
Normal
-0.4
CPT0064400001
Normal
-0.4
CPT0077500001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0063330001
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0078530001
Normal
-0.4
CPT0088570001
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0002370001
Normal
-0.4
CPT0012290003
Normal
-0.4
CPT0014350001
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0026420001
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0079000001
Normal
-0.5
CPT0019160001
Normal
-0.5
CPT0089040001
Normal
-0.5
CPT0075720003
Tumor
-0.5
CPT0001550001
Normal
-0.5
CPT0025920001
Normal
-0.5
CPT0006440003
Tumor
-0.5
CPT0075570001
Normal
-0.5
CPT0085670003
Tumor
-0.5
CPT0075170001
Normal
-0.5
CPT0025610001
Normal
-0.6
CPT0012640003
Normal
-0.6
CPT0076350001
Normal
-0.6
CPT0012570003
Normal
-0.6
CPT0012770003
Normal
-0.7
CPT0012090003
Normal
-0.8
CPT0014470001
Normal
-0.8
CPT0011240003
Tumor
-0.8
CPT0017450001
Normal
-0.8
CPT0024680001
Normal
-0.8
CPT0009020003
Normal
-0.9
CPT0018250001
Normal
-0.9
CPT0009060003
Tumor
-1.0
CPT0009080003
Normal
-1.0
CPT0012920003
Normal
-1.2
CPT0017410003
Tumor
-1.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
