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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ASPH is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
65.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
621.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
486.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
439.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
428.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
406.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
384.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
354.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
341.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
329.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
323.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
316.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
310.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
286.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
270.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
270.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
268.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
264.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
246.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
246.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
242.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
232.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
224.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
221.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
214.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
211.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
194.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
181.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
169.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
160.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
160.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
156.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
152.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
146.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
144.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
142.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
139.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
138.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
138.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
135.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
135.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
130.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
128.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
127.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
126.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
122.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
121.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
119.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
118.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
117.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
116.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
111.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
109.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
109.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
103.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
102.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
102.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
102.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
102.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
101.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
100.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
100.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
100.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
99.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
99.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
96.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
95.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
95.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
91.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
90.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
90.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
89.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
87.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
87.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
87.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
87.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
85.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
85.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
83.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
83.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
81.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
81.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
81.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
81.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
81.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
80.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
79.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
77.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
75.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
75.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
73.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
72.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
72.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
70.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
69.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
68.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
68.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
67.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
66.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
66.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
66.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
66.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
66.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
65.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
64.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
64.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
64.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
64.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
63.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
63.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
61.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
60.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
59.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
59.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
58.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
58.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
57.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
57.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
57.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
57.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
56.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
55.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
55.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
55.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
53.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
52.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
52.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
52.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
51.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
51.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
51.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
51.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
51.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
51.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
51.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
51.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
50.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
50.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
50.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
50.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
49.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
49.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
49.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
49.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
48.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
48.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
47.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
47.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
46.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
46.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
46.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
46.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
46.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
45.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
45.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
45.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
45.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
45.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
44.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
44.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
44.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
43.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
43.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
42.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
42.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
42.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
42.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
42.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
42.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
42.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
41.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
41.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
40.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
40.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
40.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
40.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
40.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
40.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
39.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
39.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
39.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
39.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
39.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
38.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
38.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
38.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
38.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
38.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
37.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
36.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
36.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
36.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
36.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
36.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
36.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
35.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
35.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
35.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
34.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
34.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
34.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
34.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
34.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
34.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
34.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
33.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
33.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
33.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
32.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
32.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
32.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
32.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
32.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
32.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
32.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
32.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
32.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
31.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
31.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
31.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
30.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
30.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
30.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
30.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
29.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
29.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
29.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
29.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
29.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
29.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
28.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
28.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
28.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
28.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
28.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
28.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
27.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
27.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
27.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
27.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
27.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
27.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
27.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
27.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
26.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
26.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
26.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
26.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
25.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
25.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
25.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
25.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
25.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
25.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
24.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
24.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
24.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
24.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
23.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
23.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
23.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
22.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
22.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
22.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
22.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
22.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
22.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
22.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
22.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
21.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
21.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
21.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
21.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
21.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
21.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
21.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
21.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
21.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
21.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
21.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
20.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
20.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
20.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
20.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
20.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
20.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
20.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
20.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
20.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
19.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
19.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
19.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
18.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
18.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
18.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
18.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
18.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
18.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
18.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
17.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
17.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
17.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
17.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
17.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
17.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
17.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
17.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
17.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
17.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
17.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
17.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
17.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
16.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
16.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
16.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
16.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
15.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
15.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
15.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
15.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
15.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
14.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
14.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
14.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
14.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
13.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
13.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
13.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
13.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
13.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
13.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
13.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
13.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
12.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
12.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
12.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
11.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
10.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
10.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
10.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
10.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
9.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
9.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
9.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
9.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
9.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
9.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
8.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
8.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
8.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
8.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
7.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
7.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
7.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
7.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
6.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
6.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
5.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ASPH is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.7
Number of samples
231
Samples
Sample
Description
TPM
DO45169
0 years, male, NA, stage:3, alive, 1350 days
502.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
453.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
382.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
282.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
250.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
247.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
239.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
214.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
190.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
189.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
181.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
172.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
172.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
155.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
154.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
152.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
152.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
141.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
139.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
136.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
132.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
130.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
127.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
124.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
119.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
111.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
107.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
104.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
102.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
99.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
93.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
92.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
89.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
87.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
87.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
82.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
82.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
80.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
78.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
77.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
76.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
75.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
73.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
72.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
71.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
70.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
69.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
69.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
68.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
66.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
64.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
63.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
62.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
62.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
61.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
61.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
59.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
59.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
58.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
57.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
56.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
54.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
52.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
52.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
51.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
49.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
49.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
49.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
48.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
48.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
48.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
46.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
45.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
45.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
44.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
44.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
44.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
43.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
42.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
41.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
41.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
40.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
40.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
39.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
38.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
38.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
38.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
38.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
37.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
37.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
37.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
37.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
36.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
36.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
35.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
35.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
35.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
35.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
34.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
34.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
33.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
33.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
33.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
31.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
31.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
31.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
31.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
31.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
31.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
31.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
30.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
30.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
30.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
30.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
29.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
29.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
29.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
29.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
28.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
27.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
27.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
26.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
26.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
26.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
26.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
26.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
26.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
25.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
25.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
25.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
25.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
24.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
24.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
24.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
24.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
23.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
23.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
23.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
23.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
22.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
22.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
22.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
22.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
22.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
21.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
21.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
21.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
21.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
21.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
20.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
19.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
19.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
19.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
19.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
19.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
19.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
18.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
18.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
18.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
18.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
17.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
17.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
17.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
17.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
17.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
17.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
17.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
16.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
16.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
16.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
16.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
16.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
16.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
16.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
15.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
15.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
15.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
15.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
15.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
15.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
14.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
14.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
14.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
14.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
14.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
14.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
13.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
13.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
13.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
13.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
13.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
12.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
12.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
12.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
12.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
12.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
12.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
12.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
11.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
11.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
10.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
10.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
10.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
10.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
10.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
10.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
10.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
10.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
10.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
10.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
10.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
9.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
9.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
9.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
8.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
8.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
8.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
8.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
7.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
7.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
7.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
6.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
6.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
5.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
5.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
4.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
3.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
267
Tumor
2.5
161
Tumor
2.0
427
Tumor
1.8
567
Tumor
1.6
557
Tumor
1.5
375
Tumor
1.5
1041
Tumor
1.4
663
Tumor
1.3
445
Tumor
1.2
537
Tumor
1.1
135
Tumor
1.0
525
Tumor
1.0
857
Tumor
1.0
533
Tumor
0.9
911
Tumor
0.9
257
Tumor
0.7
865
Tumor
0.7
113
Tumor
0.6
497
Tumor
0.6
421
Tumor
0.6
925
Tumor
0.6
231
Tumor
0.6
953
Tumor
0.5
112
Tumor
0.5
467
Tumor
0.5
125
Tumor
0.5
915
Tumor
0.5
573
Tumor
0.5
491
Tumor
0.4
313
Tumor
0.4
823
Tumor
0.4
423
Tumor
0.3
1013
Tumor
0.3
523
Tumor
0.3
367
Tumor
0.2
463
Tumor
0.2
715
Tumor
0.2
355
Tumor
0.2
387
Tumor
0.2
913
Tumor
0.2
721
Tumor
0.2
983
Tumor
0.2
191
Tumor
0.2
617
Tumor
0.1
383
Tumor
0.1
487
Tumor
0.1
145
Tumor
0.1
147
Tumor
0.1
493
Tumor
0.1
851
Tumor
0.1
535
Tumor
0.1
443
Tumor
0.1
327
Tumor
0.1
124
Normal
0.0
641
Tumor
0.0
745
Tumor
0.0
571
Tumor
0.0
1025
Tumor
0.0
357
Tumor
0.0
425
Tumor
0.0
524
Normal
0.0
636
Normal
0.0
213
Tumor
0.0
937
Tumor
0.0
615
Tumor
-0.1
415
Tumor
-0.1
477
Tumor
-0.1
148
Normal
-0.1
877
Tumor
-0.1
332
Normal
-0.1
923
Tumor
-0.1
873
Tumor
-0.1
298
Normal
-0.1
368
Normal
-0.1
283
Tumor
-0.1
228
Normal
-0.1
466
Normal
-0.1
358
Normal
-0.1
451
Tumor
-0.1
412
Normal
-0.1
744
Normal
-0.1
354
Normal
-0.1
1014
Normal
-0.1
686
Normal
-0.1
376
Normal
-0.1
778
Normal
-0.1
695
Tumor
-0.1
1044
Normal
-0.1
558
Normal
-0.1
384
Normal
-0.2
616
Normal
-0.2
572
Normal
-0.2
816
Normal
-0.2
452
Normal
-0.2
878
Normal
-0.2
426
Normal
-0.2
162
Normal
-0.2
392
Normal
-0.2
214
Normal
-0.2
344
Normal
-0.2
554
Normal
-0.2
723
Tumor
-0.2
465
Tumor
-0.2
516
Normal
-0.2
232
Normal
-0.2
968
Normal
-0.2
353
Tumor
-0.2
268
Normal
-0.2
311
Tumor
-0.2
527
Tumor
-0.2
448
Normal
-0.2
114
Normal
-0.2
922
Normal
-0.2
172
Normal
-0.2
813
Tumor
-0.2
714
Normal
-0.2
696
Normal
-0.2
186
Normal
-0.2
422
Normal
-0.2
738
Normal
-0.2
137
Tumor
-0.2
563
Tumor
-0.2
882
Normal
-0.2
574
Normal
-0.2
128
Normal
-0.2
957
Tumor
-0.2
492
Normal
-0.2
642
Normal
-0.2
662
Normal
-0.2
982
Normal
-0.2
852
Normal
-0.2
314
Normal
-0.3
528
Normal
-0.3
672
Normal
-0.3
746
Normal
-0.3
363
Tumor
-0.3
536
Normal
-0.3
984
Normal
-0.3
262
Normal
-0.3
187
Tumor
-0.3
944
Normal
-0.3
473
Tumor
-0.3
284
Normal
-0.3
488
Normal
-0.3
212
Normal
-0.3
955
Tumor
-0.3
342
Normal
-0.3
952
Normal
-0.3
224
Normal
-0.3
411
Tumor
-0.3
132
Normal
-0.3
111
Normal
-0.3
185
Tumor
-0.3
261
Tumor
-0.3
286
Normal
-0.3
481
Tumor
-0.3
432
Normal
-0.3
352
Normal
-0.3
331
Tumor
-0.3
867
Tumor
-0.3
136
Normal
-0.3
478
Normal
-0.3
123
Tumor
-0.3
468
Normal
-0.3
526
Normal
-0.3
433
Tumor
-0.3
414
Normal
-0.3
364
Normal
-0.3
278
Normal
-0.3
1026
Normal
-0.3
954
Normal
-0.3
517
Tumor
-0.3
926
Normal
-0.3
858
Normal
-0.3
192
Normal
-0.3
963
Tumor
-0.3
564
Normal
-0.3
742
Normal
-0.3
434
Normal
-0.3
1022
Normal
-0.3
456
Normal
-0.3
698
Normal
-0.3
484
Normal
-0.3
924
Normal
-0.3
356
Normal
-0.3
966
Normal
-0.3
394
Normal
-0.4
568
Normal
-0.4
917
Tumor
-0.4
428
Normal
-0.4
518
Normal
-0.4
685
Tumor
-0.4
786
Normal
-0.4
126
Normal
-0.4
366
Normal
-0.4
1028
Normal
-0.4
956
Normal
-0.4
1043
Tumor
-0.4
258
Normal
-0.4
818
Normal
-0.4
494
Normal
-0.4
514
Normal
-0.4
756
Normal
-0.4
285
Tumor
-0.4
861
Tumor
-0.4
146
Normal
-0.4
446
Normal
-0.4
958
Normal
-0.4
864
Normal
-0.4
965
Tumor
-0.4
728
Normal
-0.4
912
Normal
-0.4
546
Normal
-0.4
664
Normal
-0.4
1032
Normal
-0.4
138
Normal
-0.4
716
Normal
-0.4
474
Normal
-0.4
1046
Normal
-0.4
978
Normal
-0.4
628
Normal
-0.4
824
Normal
-0.4
386
Normal
-0.4
874
Normal
-0.4
722
Normal
-0.4
814
Normal
-0.4
142
Normal
-0.4
1016
Normal
-0.4
635
Tumor
-0.4
737
Tumor
-0.4
648
Normal
-0.4
1027
Tumor
-0.4
943
Tumor
-0.4
964
Normal
-0.4
343
Tumor
-0.4
444
Normal
-0.4
697
Tumor
-0.4
341
Tumor
-0.4
222
Normal
-0.5
866
Normal
-0.5
538
Normal
-0.5
471
Tumor
-0.5
362
Normal
-0.5
464
Normal
-0.5
223
Tumor
-0.5
981
Tumor
-0.5
1042
Normal
-0.5
312
Normal
-0.5
395
Tumor
-0.5
534
Normal
-0.5
424
Normal
-0.5
881
Tumor
-0.5
436
Normal
-0.5
462
Normal
-0.5
661
Tumor
-0.5
196
Normal
-0.5
862
Normal
-0.5
755
Tumor
-0.5
938
Normal
-0.5
195
Tumor
-0.5
727
Tumor
-0.5
618
Normal
-0.5
188
Normal
-0.5
498
Normal
-0.5
975
Tumor
-0.5
277
Tumor
-0.5
218
Normal
-0.5
916
Normal
-0.5
743
Tumor
-0.5
361
Tumor
-0.5
388
Normal
-0.5
328
Normal
-0.5
918
Normal
-0.5
416
Normal
-0.5
666
Normal
-0.5
413
Tumor
-0.5
131
Tumor
-0.6
472
Normal
-0.6
396
Normal
-0.6
431
Tumor
-0.6
127
Tumor
-0.6
272
Normal
-0.6
1031
Tumor
-0.6
1015
Tumor
-0.6
271
Tumor
-0.6
482
Normal
-0.6
868
Normal
-0.6
297
Tumor
-0.6
914
Normal
-0.6
217
Tumor
-0.6
883
Tumor
-0.6
976
Normal
-0.6
171
Tumor
-0.6
1021
Tumor
-0.7
671
Tumor
-0.7
553
Tumor
-0.7
221
Tumor
-0.7
817
Tumor
-0.7
884
Normal
-0.7
815
Tumor
-0.7
951
Tumor
-0.7
977
Tumor
-0.7
724
Normal
-0.7
435
Tumor
-0.7
141
Tumor
-0.7
863
Tumor
-0.7
447
Tumor
-0.7
365
Tumor
-0.8
515
Tumor
-0.8
785
Tumor
-0.8
461
Tumor
-0.8
455
Tumor
-0.8
227
Tumor
-0.9
211
Tumor
-0.9
393
Tumor
-0.9
627
Tumor
-0.9
483
Tumor
-0.9
967
Tumor
-0.9
391
Tumor
-0.9
665
Tumor
-0.9
921
Tumor
-1.0
1045
Tumor
-1.0
647
Tumor
-1.0
351
Tumor
-1.0
385
Tumor
-1.1
545
Tumor
-1.2
713
Tumor
-1.2
741
Tumor
-1.2
513
Tumor
-1.5
777
Tumor
-1.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
