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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS4X is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1438.1
Number of samples
349
Samples
Sample
Description
TPM
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
5175.6
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
5062.1
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
4483.8
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
4146.1
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
3908.5
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
3724.7
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
3383.6
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
3329.5
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
3309.7
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
3289.2
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
3169.1
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
3105.4
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
2931.1
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
2899.9
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
2895.0
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
2839.1
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
2819.8
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
2816.1
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
2770.2
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
2680.9
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
2635.0
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
2628.0
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
2619.1
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
2614.5
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
2607.9
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
2598.3
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
2592.7
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
2584.3
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
2570.5
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
2563.1
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
2537.7
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
2533.0
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
2519.4
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
2497.8
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
2495.7
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
2495.1
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
2457.7
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
2443.5
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
2436.0
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
2434.6
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
2430.5
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
2389.6
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
2384.6
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
2321.3
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
2313.4
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
2304.7
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
2303.6
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
2296.8
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
2258.9
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
2233.3
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
2205.3
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
2198.7
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
2184.2
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
2175.6
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
2172.9
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
2127.9
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2126.9
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
2109.3
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
2107.4
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
2094.8
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
2089.3
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
2087.4
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
2079.8
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
2027.7
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
2021.2
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
2015.4
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
2008.4
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
1988.1
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
1941.7
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
1929.0
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
1917.8
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
1901.1
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
1897.2
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
1892.9
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
1892.7
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1890.8
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
1877.6
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1875.3
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
1857.2
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
1845.7
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
1835.4
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
1829.9
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
1825.3
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
1791.5
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
1787.9
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
1782.8
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
1763.0
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
1747.4
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
1747.1
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
1739.5
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
1705.3
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
1688.6
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1681.3
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
1678.0
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
1677.0
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
1672.0
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
1637.1
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
1637.0
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
1632.4
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
1622.7
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
1608.7
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
1608.5
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
1606.6
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
1606.4
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
1598.7
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
1594.7
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
1590.1
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
1585.8
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
1583.9
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
1577.1
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
1561.8
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1560.4
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
1551.9
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
1528.3
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
1519.8
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
1515.5
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
1504.9
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
1502.8
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
1490.3
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
1485.0
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
1482.4
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
1465.9
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1458.9
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
1454.6
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
1453.7
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
1449.6
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
1445.4
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
1431.1
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
1430.0
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
1423.7
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
1418.7
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
1417.9
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1412.7
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
1401.3
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1400.0
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
1397.4
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
1387.7
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
1387.2
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1385.7
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
1383.6
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
1381.4
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
1377.4
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
1375.0
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
1352.5
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
1342.3
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
1337.7
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
1336.1
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
1335.6
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
1334.2
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
1333.7
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
1332.9
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
1328.3
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
1327.5
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
1326.3
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
1323.3
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
1323.0
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
1322.4
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
1321.9
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
1320.4
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
1303.5
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
1299.7
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1297.8
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
1293.1
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
1288.4
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
1285.9
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
1283.6
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
1279.4
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1277.7
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
1275.0
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
1271.8
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
1271.6
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
1266.8
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
1264.7
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
1260.0
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
1255.6
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
1251.6
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
1245.8
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
1240.6
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
1237.3
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
1235.4
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
1228.2
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
1224.3
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
1223.2
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
1212.7
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
1208.5
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
1204.8
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
1203.8
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
1200.0
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
1194.3
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
1188.1
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
1179.3
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1179.2
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
1176.3
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
1175.0
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
1173.2
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
1169.5
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
1166.5
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
1164.4
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
1158.7
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
1157.3
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
1151.6
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1142.3
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
1140.1
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
1137.9
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
1137.2
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
1136.4
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
1128.9
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
1125.9
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
1121.0
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1120.5
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
1116.1
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
1114.5
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
1113.1
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
1105.9
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1102.2
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
1093.4
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
1087.7
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
1083.8
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
1073.1
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
1071.2
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
1068.7
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
1066.0
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
1065.4
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
1064.8
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
1064.4
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
1063.5
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
1059.0
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
1049.1
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1042.9
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
1042.0
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
1041.8
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
1037.5
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
1036.3
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
1035.7
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1032.4
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
1031.2
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
1029.5
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
1024.3
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
1018.9
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
1009.0
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
1002.9
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
1001.9
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
996.8
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
995.7
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
983.4
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
975.7
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
974.6
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
968.8
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
967.8
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
961.4
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
958.8
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
958.3
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
957.9
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
956.8
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
954.6
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
953.8
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
948.6
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
933.5
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
927.8
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
927.3
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
925.4
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
924.3
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
924.0
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
922.7
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
922.5
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
919.8
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
906.0
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
905.0
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
902.6
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
900.7
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
895.5
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
893.9
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
888.4
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
886.5
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
882.7
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
871.7
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
862.1
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
862.1
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
862.0
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
855.2
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
850.4
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
850.1
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
849.7
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
848.1
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
843.1
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
841.3
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
835.2
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
831.6
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
829.7
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
828.1
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
818.5
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
813.2
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
809.3
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
809.3
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
804.8
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
800.3
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
799.1
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
789.5
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
786.1
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
782.6
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
782.3
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
779.3
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
778.1
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
775.7
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
773.6
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
770.4
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
763.7
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
750.2
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
748.1
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
745.5
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
743.3
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
734.6
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
733.5
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
728.9
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
725.6
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
724.8
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
722.7
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
710.3
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
691.9
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
686.6
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
673.3
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
672.1
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
672.0
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
660.2
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
659.7
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
644.8
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
629.2
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
625.1
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
622.8
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
617.5
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
606.2
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
602.3
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
589.9
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
588.7
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
584.6
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
576.2
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
567.7
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
565.9
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
565.3
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
562.5
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
557.0
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
556.5
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
547.0
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
545.0
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
534.7
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
512.3
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
498.2
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
393.5
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS4X is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1675.6
Number of samples
81
Samples
Sample
Description
TPM
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
6309.2
DO46384
0 years, female, NA, stage:III, dead, 614 days
5267.2
DO46342
0 years, female, NA, stage:III, dead, 1398 days
3547.5
DO46338
0 years, female, NA, stage:III, dead, 596 days
3124.7
DO46366
0 years, female, NA, stage:III, dead, 2054 days
3108.3
DO46591
0 years, female, NA, stage:III, dead, 195 days
2935.0
DO46328
0 years, female, NA, stage:III, dead, 972 days
2911.9
DO46380
0 years, female, NA, stage:III, dead, 1423 days
2760.5
DO46390
0 years, female, NA, stage:III, dead, 374 days
2594.5
DO46561
0 years, female, NA, stage:III, dead, 195 days
2485.1
DO46352
0 years, female, NA, stage:III, dead, 677 days
2411.8
DO46386
0 years, female, NA, stage:III, dead, 1162 days
2293.5
DO46370
0 years, female, NA, stage:III, dead, 1727 days
2289.4
DO46453
0 years, female, NA, stage:III, dead, 3294 days
2281.2
DO46597
0 years, female, NA, stage:III, dead, 393 days
2230.2
DO46402
0 years, female, NA, stage:III, dead, 511 days
2118.5
DO46581
0 years, female, NA, stage:III, dead, 408 days
2069.2
DO46518
0 years, female, NA, stage:III, alive, 2960 days
2044.1
DO46388
0 years, female, NA, stage:III, dead, 413 days
2038.0
DO46606
0 years, female, NA, stage:III, alive, 804 days
1984.2
DO46560
0 years, female, NA, stage:IV, dead, 286 days
1966.7
DO46331
0 years, female, NA, stage:III, dead, 612 days
1959.4
DO46326
0 years, female, NA, stage:III, dead, 701 days
1933.0
DO46356
0 years, female, NA, stage:III, dead, 911 days
1845.4
DO46432
0 years, female, NA, stage:III, alive, 2218 days
1844.9
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
1808.4
DO46533
0 years, female, NA, stage:III, alive, 3667 days
1780.1
DO46404
0 years, female, NA, stage:III, dead, 690 days
1750.1
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
1744.6
DO46576
0 years, female, NA, stage:III, alive, 133 days
1739.9
DO46392
0 years, female, NA, stage:III, dead, 628 days
1729.9
DO46325
0 years, female, NA, stage:III, dead, 477 days
1694.8
DO46493
0 years, female, NA, stage:IV, alive, 839 days
1692.1
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
1677.0
DO46358
0 years, female, NA, stage:III, dead, 423 days
1663.0
DO46330
0 years, female, NA, stage:III, dead, 684 days
1652.0
DO46586
0 years, female, NA, stage:III, dead, 1019 days
1647.7
DO46333
0 years, female, NA, stage:III, dead, 359 days
1642.0
DO46412
0 years, female, NA, stage:III, dead, 597 days
1558.9
DO46538
0 years, female, NA, stage:III, dead, 1527 days
1544.8
DO46568
0 years, female, NA, stage:III, dead, 320 days
1544.1
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
1506.9
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
1499.2
DO46463
0 years, female, NA, stage:III, dead, 2451 days
1492.1
DO46372
0 years, female, NA, stage:III, dead, 1326 days
1465.7
DO46611
0 years, female, NA, stage:III, dead, 734 days
1454.1
DO46344
0 years, female, NA, stage:III, dead, 642 days
1359.8
DO46364
0 years, female, NA, stage:III, dead, 806 days
1359.3
DO46346
0 years, female, NA, stage:III, dead, 1187 days
1346.3
DO46350
0 years, female, NA, stage:III, dead, 886 days
1302.8
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
1295.5
DO46400
0 years, female, NA, stage:III, dead, 719 days
1251.8
DO46602
0 years, female, NA, stage:III, dead, 205 days
1251.4
DO46376
0 years, female, NA, stage:III, dead, 1430 days
1250.1
DO46508
0 years, female, NA, stage:III, dead, 2101 days
1234.6
DO46329
0 years, female, NA, stage:III, dead, 1699 days
1182.3
DO46408
0 years, female, NA, stage:III, dead, 489 days
1172.5
DO46546
0 years, female, NA, stage:III, dead, 1889 days
1157.7
DO46436
0 years, female, NA, stage:III, alive, 3193 days
1149.8
DO46378
0 years, female, NA, stage:III, alive, 843 days
1148.6
DO46551
0 years, female, NA, stage:III, dead, 1055 days
1103.8
DO46468
0 years, female, NA, stage:III, alive, 2776 days
1080.9
DO46448
0 years, female, NA, stage:III, dead, 654 days
1077.8
DO46368
0 years, female, NA, stage:III, dead, 2879 days
1062.5
DO46443
0 years, female, NA, stage:III, dead, 2464 days
1042.0
DO46354
0 years, female, NA, stage:III, dead, 843 days
1039.0
DO46334
0 years, female, NA, stage:III, dead, 496 days
1014.3
DO46396
0 years, female, NA, stage:III, dead, 583 days
1010.9
DO46398
0 years, female, NA, stage:III, alive, 437 days
970.8
DO46336
0 years, female, NA, stage:IV, dead, 664 days
883.5
DO46588
0 years, female, NA, stage:III, dead, 438 days
826.8
DO46340
0 years, female, NA, stage:III, dead, 616 days
760.3
DO46571
0 years, female, NA, stage:III, dead, 243 days
738.8
DO46332
0 years, female, NA, stage:III, dead, 689 days
729.6
DO46528
0 years, female, NA, stage:III, alive, 6139 days
722.1
DO46374
0 years, female, NA, stage:III, dead, 1409 days
696.1
DO46382
0 years, female, NA, stage:IV, dead, 311 days
692.3
DO46362
0 years, female, NA, stage:III, dead, 1639 days
611.7
DO46566
0 years, female, NA, stage:III, dead, 673 days
581.5
DO46348
0 years, female, NA, stage:IV, dead, 287 days
540.9
DO46327
0 years, female, NA, stage:III, dead, 184 days
440.4
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
0.9
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.7
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
0.6
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.6
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
0.6
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
0.5
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.5
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.5
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.5
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.5
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.5
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.5
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.5
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.4
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
0.4
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
0.4
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
0.4
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.4
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.4
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.3
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.3
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.3
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.3
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.3
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.3
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
0.3
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
0.3
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.3
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.2
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.2
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.2
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.2
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.2
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.2
15524912-685a-47ce-a824-567848_D2
Tumor
0.2
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
0.2
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.2
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.2
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.2
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.2
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
0.2
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
0.2
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.1
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.1
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.1
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.1
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
0.1
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
0.1
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.1
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.1
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.1
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.1
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.1
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.1
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.0
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.0
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.0
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.0
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
0.0
161317f3-1a39-438e-af45-cd2502_D2
Tumor
0.0
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.0
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.0
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-0.1
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-0.1
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-0.1
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.1
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-0.1
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
-0.1
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-0.2
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.2
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.2
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-0.2
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-0.2
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-0.3
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.3
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-0.3
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.3
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.3
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-0.3
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-0.3
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-0.4
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-0.4
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-0.4
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-0.4
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.4
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-0.4
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.4
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-0.4
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.5
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.5
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.5
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
-0.5
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
-0.5
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.5
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.5
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.5
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-0.6
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.6
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.6
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-0.6
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.6
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.6
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-0.7
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.7
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-0.7
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.8
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.9
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-0.9
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.