HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:9.7 nTPM
HPA Brain:45.8 nTPM
GTEx:9.7 nTPM
FANTOM5:26.7 Scaled Tags Per Million
Pig:28.9 nTPM
Mouse:15.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007639Antibody CAB018771
Glial cells MediumHigh
Neuronal cells MediumHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 45.8
Sample id Sample description nTPM
Hippocampus
nTPM: 41.0
1911 Female, age 85, right hemisphere 44.5
2529 Female, age 94, left hemisphere 43.4
1855 Male, age 76, left hemisphere 42.0
2148 Female, age 91, left hemisphere 41.5
2621 Female, age 67, right hemisphere 41.0
1898 Male, age 80, left hemisphere 33.5
Dentate gyrus
nTPM: 40.7
1927 Female, age 91, both hemispheres 46.6
2528 Male, age 74, both hemispheres 42.2
2246 Female, age 85, both hemispheres 40.3
2531 Female, age 67, both hemispheres 39.7
2010 Male, age 76, both hemispheres 38.0
2530 Female, age 94, left hemisphere 37.6
Entorhinal gyrus
nTPM: 43.2
2117 Female, age 91, right hemisphere 47.6
2764 Male, age 80, right hemisphere 45.2
1787 Male, age 76, left hemisphere 44.1
2686 Male, age 75, right hemisphere 41.4
1938 Female, age 85, left hemisphere 40.5
2613 Female, age 94, left hemisphere 40.5
Hippocampus, CA1
nTPM: 42.2
2749 Male, age 80, left hemisphere 44.2
2082 Female, age 91, right hemisphere 44.1
2045 Male, age 76, both hemispheres 43.3
2527 Male, age 74, both hemispheres 40.5
1873 Female, age 85, both hemispheres 38.9
Hippocampus, CA2
nTPM: 45.0
1940 Female, age 85, left hemisphere 57.5
2113 Female, age 91, right hemisphere 48.2
1892 Male, age 76, both hemispheres 43.6
2437 Female, age 94, left hemisphere 43.6
1963 Male, age 80, left hemisphere 38.7
2249 Male, age 74, both hemispheres 38.1
Hippocampus, CA3
nTPM: 42.6
2620 Female, age 94, left hemisphere 45.0
2436 Male, age 74, both hemispheres 44.6
1867 Male, age 76, both hemispheres 43.2
1891 Female, age 85, both hemispheres 42.0
2137 Male, age 80, left hemisphere 41.3
2861 Female, age 67, both hemispheres 39.8
Parahippocampal cortex
nTPM: 45.8
2693 Female, age 94, both hemispheres 52.1
1850 Male, age 80, both hemispheres 50.6
2018 Male, age 76, both hemispheres 47.5
2532 Female, age 72, left hemisphere 47.2
1990 Female, age 91, right hemisphere 46.5
2692 Male, age 74, both hemispheres 43.7
2622 Female, age 67, right hemisphere 43.5
1933 Female, age 85, both hemispheres 43.3
2245 Female, age 91, both hemispheres 42.4
2250 Female, age 67, right hemisphere 41.7
Perirhinal gyrus
nTPM: 45.8
1794 Male, age 80, right hemisphere 46.8
2848 Male, age 76, right hemisphere 46.8
1847 Female, age 91, left hemisphere 46.5
2521 Female, age 94, right hemisphere 44.7
1841 Female, age 85, right hemisphere 44.3
Subiculum
nTPM: 42.9
2042 Male, age 76, both hemispheres 47.4
2729 Female, age 91, right hemisphere 47.4
2619 Male, age 74, both hemispheres 46.1
1901 Male, age 80, both hemispheres 41.0
2438 Female, age 94, left hemisphere 38.9
1977 Female, age 85, both hemispheres 36.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 9.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.7
Samples: 197

Max nTPM: 14.9
Min nTPM: 5.9
Std nTPM: 1.6
Median nTPM: 9.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 14.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 14.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 14.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 13.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 13.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 13.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 13.1
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 13.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 13.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 13.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 12.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.7
FF:10169-103B7 60 years, female 32.1
FF:10153-102I9 76 years, female 21.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 28.9
Pig sample Sample description nTPM
Subiculum
nTPM: 24.7
Samples: 4

Max nTPM: 25.8
Min nTPM: 23.5
Sample A Female 25.2
Sample B Female 25.8
Sample C Male 24.4
Sample D Male 23.5
Dorsal hippocampus
nTPM: 25.4
Samples: 4

Max nTPM: 26.4
Min nTPM: 23.6
Sample A Female 25.3
Sample B Female 26.1
Sample C Male 23.6
Sample D Male 26.4
Entorhinal cortex
nTPM: 28.9
Samples: 4

Max nTPM: 30.8
Min nTPM: 26.9
Sample A Female 28.7
Sample B Female 30.8
Sample C Male 26.9
Sample D Male 29.2
Ventral hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 27.2
Min nTPM: 23.1
Sample A Female 27.2
Sample B Female 27.2
Sample C Male 26.5
Sample D Male 23.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 15.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.2
Samples: 4

Max nTPM: 15.6
Min nTPM: 14.3
Sample A Male 15.4
Sample B Male 14.3
Sample C Female 15.3
Sample D Female 15.6
Hippocampal formation
nTPM: 15.1
Samples: 4

Max nTPM: 16.0
Min nTPM: 14.0
Sample A Male 14.0
Sample B Male 14.6
Sample C Female 15.7
Sample D Female 16.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68745048 Antisense, RP_050210_01_B08, Mouse strain C57BL/6J (56 days, male) 0.3

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