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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
544.7
nTPM
FANTOM5:
449.6
Scaled Tags Per Million
Pig:
378.9
nTPM
Allen mouse:
12.9
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
544.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 238.6
1984
Male, age 76, both hemispheres
295.2
2301
Female, age 85, both hemispheres
268.5
2188
Female, age 91, both hemispheres
211.7
2090
Male, age 80, both hemispheres
179.0
Dorsal cochlear nucleus nTPM: 239.4
2058
Male, age 76, both hemispheres
289.6
2370
Male, age 61, both hemispheres
260.8
2802
Male, age 74, right hemisphere
223.3
2187
Female, age 91, both hemispheres
222.0
2378
Male, age 80, both hemispheres
201.4
Dorsal tegmental nucleus nTPM: 230.6
1936
Male, age 76, left hemisphere
262.4
2083
Male, age 80, both hemispheres
261.6
2358
Male, age 61, both hemispheres
224.6
2326
Male, age 74, both hemispheres
173.8
Dorsolateral tegmental area nTPM: 196.6
2141
Male, age 76, both hemispheres
278.4
2654
Male, age 80, both hemispheres
230.2
2751
Female, age 85, both hemispheres
213.1
2360
Male, age 74, both hemispheres
153.2
2337
Male, age 61, both hemispheres
108.2
Kolliker-Fuse nucleus nTPM: 281.0
2793
Female, age 91, left hemisphere
330.1
2163
Male, age 80, both hemispheres
303.4
2315
Male, age 76, right hemisphere
209.5
Lateral lemniscal nuclei nTPM: 448.1
2453
Male, age 74, right hemisphere
560.5
2169
Male, age 76, both hemispheres
497.6
2036
Male, age 80, both hemispheres
426.0
2320
Female, age 91, left hemisphere
390.9
2746
Female, age 85, left hemisphere
365.3
Lateral parabrachial nucleus nTPM: 265.2
2139
Female, age 85, right hemisphere
408.4
2790
Male, age 61, both hemispheres
280.2
2013
Male, age 80, both hemispheres
250.7
2792
Male, age 76, both hemispheres
121.5
Lateral vestibular nucleus nTPM: 277.6
2184
Male, age 76, both hemispheres
336.4
2311
Male, age 80, both hemispheres
218.9
Locus coeruleus nTPM: 296.8
2123
Female, age 91, both hemispheres
339.7
2317
Female, age 72, unknown
317.0
2720
Male, age 74, both hemispheres
307.7
2162
Male, age 80, both hemispheres
299.2
1980
Male, age 76, both hemispheres
293.6
2014
Male, age 55, unknown
286.1
2788
Male, age 74, unknown
234.5
Medial parabrachial nucleus nTPM: 252.1
2156
Male, age 61, both hemispheres
303.3
2854
Male, age 80, both hemispheres
282.7
2786
Male, age 76, both hemispheres
246.1
2463
Female, age 85, right hemisphere
230.2
2170
Female, age 91, both hemispheres
198.0
Medial periolivary nuclei nTPM: 430.1
2171
Female, age 85, both hemispheres
582.6
2063
Male, age 76, both hemispheres
569.5
2791
Male, age 74, right hemisphere
386.4
2458
Female, age 91, both hemispheres
350.5
2081
Male, age 80, both hemispheres
261.4
Motor facial nucleus nTPM: 459.7
2062
Male, age 76, both hemispheres
623.2
2327
Male, age 80, both hemispheres
551.8
2795
Female, age 91, both hemispheres
523.0
2365
Male, age 74, right hemisphere
427.6
2697
Female, age 85, both hemispheres
357.8
2126
Male, age 61, both hemispheres
274.7
Motor trigeminal nucleus nTPM: 345.6
2560
Male, age 74, both hemispheres
466.9
2079
Male, age 80, both hemispheres
416.4
2321
Female, age 91, both hemispheres
290.8
2335
Male, age 61, both hemispheres
289.9
2309
Male, age 76, both hemispheres
264.2
Nuclei of the trapezoid body nTPM: 544.7
2735
Female, age 85, both hemispheres
654.4
2159
Male, age 61, both hemispheres
603.5
1983
Male, age 76, both hemispheres
557.8
2368
Female, age 91, both hemispheres
499.7
2166
Male, age 80, both hemispheres
408.1
Nucleus raphe magnus nTPM: 530.9
2172
Female, age 85, both hemispheres
670.9
2160
Male, age 61, both hemispheres
642.6
2455
Male, age 74, both hemispheres
560.2
2328
Male, age 80, both hemispheres
482.9
2051
Male, age 76, both hemispheres
420.9
2459
Female, age 91, both hemispheres
407.9
Paramedian reticular nucleus nTPM: 292.8
2050
Female, age 85, both hemispheres
393.4
2313
Male, age 61, both hemispheres
338.4
2057
Male, age 80, both hemispheres
278.2
2052
Male, age 76, both hemispheres
161.2
Pedunculopontine tegmental nucleus nTPM: 233.4
1921
Female, age 85, both hemispheres
285.5
2334
Male, age 80, both hemispheres
220.1
2338
Male, age 61, both hemispheres
194.7
Pontine nuclei nTPM: 435.9
2787
Female, age 85, both hemispheres
655.0
1968
Male, age 76, left hemisphere
545.5
2727
Male, age 61, right hemisphere
540.9
1863
Male, age 55, unknown
482.0
2109
Female, age 72, unknown
392.0
2115
Male, age 80, left hemisphere
329.5
2454
Male, age 74, left hemisphere
312.6
2319
Female, age 91, both hemispheres
229.8
Pontine raphe nucleus nTPM: 380.8
2122
Female, age 85, midline
449.2
2853
Male, age 76, midline
312.4
Posteroventral cochlear nucleus nTPM: 203.7
2752
Female, age 85, both hemispheres
349.8
2070
Male, age 76, both hemispheres
260.4
2371
Male, age 61, both hemispheres
242.0
2341
Male, age 80, both hemispheres
119.8
2135
Female, age 91, both hemispheres
46.4
Principal sensory trigeminal nucleus nTPM: 416.5
2158
Male, age 61, both hemispheres
616.3
2008
Male, age 80, left hemisphere
451.4
2324
Male, age 76, both hemispheres
301.8
2367
Female, age 91, left hemisphere
296.4
Reticular pontine nucleus, caudal nTPM: 386.7
2332
Male, age 80, right hemisphere
589.8
2092
Male, age 76, both hemispheres
382.3
2457
Female, age 91, both hemispheres
376.2
2559
Male, age 74, both hemispheres
198.4
Reticular pontine nucleus, oral nTPM: 300.8
2361
Male, age 74, both hemispheres
383.2
2012
Female, age 85, both hemispheres
336.1
2366
Female, age 91, both hemispheres
285.7
2167
Male, age 76, both hemispheres
270.9
1939
Male, age 80, both hemispheres
228.0
Reticulotegmental nucleus nTPM: 345.9
2325
Male, age 76, both hemispheres
396.7
2452
Male, age 74, both hemispheres
365.3
2333
Male, age 80, both hemispheres
336.7
2322
Female, age 91, both hemispheres
284.8
Spinal trigeminal nucleus, oral nTPM: 298.4
2164
Male, age 80, both hemispheres
308.0
2737
Female, age 85, both hemispheres
300.2
1978
Male, age 76, both hemispheres
286.9
Subcoeruleus area nTPM: 292.5
2089
Male, age 76, left hemisphere
396.7
1958
Male, age 80, both hemispheres
325.4
2323
Female, age 91, left hemisphere
309.9
2451
Male, age 74, both hemispheres
273.3
2369
Female, age 85, left hemisphere
156.9
Superior olive nTPM: 409.5
2561
Female, age 91, both hemispheres
462.6
1875
Female, age 85, both hemispheres
445.7
2329
Male, age 80, right hemisphere
437.2
2020
Male, age 76, both hemispheres
362.0
2364
Male, age 74, right hemisphere
340.0
Ventral periolivary nuclei nTPM: 466.3
2130
Female, age 85, both hemispheres
555.3
2165
Male, age 80, both hemispheres
539.9
2794
Female, age 91, left hemisphere
453.7
2023
Male, age 76, both hemispheres
316.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 359.9
2449
Male, age 74, both hemispheres
502.2
2161
Male, age 80, both hemispheres
402.8
1959
Male, age 76, both hemispheres
391.7
2456
Female, age 91, both hemispheres
368.3
2840
Female, age 85, both hemispheres
280.2
2359
Male, age 61, both hemispheres
214.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
378.9
Pig sample
Sample description
nTPM
Pons nTPM: 378.9
Samples: 4
Max nTPM: 507.8
Min nTPM: 246.3
Sample A
Female
507.8
Sample B
Female
246.3
Sample C
Male
336.0
Sample D
Male
425.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
