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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SERPINA1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13009.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
75812.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
56787.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
47515.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
47134.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
38620.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
37439.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
37329.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
35301.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
32479.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
31782.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
31062.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
30795.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
30693.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
30626.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
30477.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
29412.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
29149.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
29056.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
28700.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
27861.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
27700.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
27294.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
27219.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
26843.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
26553.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
26290.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
26170.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
24568.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
24313.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
24307.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
23656.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
23643.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
23410.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
23323.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
23230.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
23076.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
22978.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
22958.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
22878.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
22867.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
22679.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
22560.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
22490.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
22474.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
22190.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
21903.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
21613.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
21498.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
21355.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
21063.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
20742.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
20689.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
20637.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
20511.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
20373.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
20367.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
20232.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
20218.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
20148.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
19861.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
19851.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
19794.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
19595.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
19525.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
19278.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
19236.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
19194.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
19088.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
18884.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
18820.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
18793.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
18586.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
18519.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
18337.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
18152.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
18088.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
18053.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
17982.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
17877.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
17796.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
17607.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
17511.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
17468.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
17272.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
17269.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
17268.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
17140.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
17131.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
16867.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
16685.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
16681.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
16642.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
16636.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
16552.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
16547.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
16454.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
16312.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
15933.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
15900.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
15820.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
15807.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
15794.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
15743.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
15693.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
15658.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
15581.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
15580.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
15565.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
15543.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
15499.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
15496.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
15475.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
15459.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
15366.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
15291.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
15278.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
15174.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
14947.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
14908.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
14765.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
14751.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
14678.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
14553.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
14506.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
14472.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
14432.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
14429.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
14397.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
14177.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
14146.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
14034.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
14028.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
13989.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
13973.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
13927.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
13834.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
13753.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
13638.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
13531.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
13359.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
13256.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
13208.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
13021.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
13021.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
12994.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
12887.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
12813.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
12794.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
12790.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
12770.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
12749.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
12710.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
12579.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
12433.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
12429.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
12359.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
12288.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
12264.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
12260.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
12239.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
12164.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
12084.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
12038.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
12035.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
12018.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
12012.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12003.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
11990.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
11972.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
11964.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
11964.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
11944.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11917.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
11890.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
11881.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
11852.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
11820.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
11797.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
11712.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
11568.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
11557.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
11550.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11361.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
11355.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
11317.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
11300.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
11253.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
11232.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
11206.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
11130.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
11115.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
11090.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
10893.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
10893.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
10873.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
10711.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
10528.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
10488.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
10487.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
10463.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10372.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
10340.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10301.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
10236.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
10189.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
10122.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
10087.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9995.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
9993.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
9991.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
9911.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
9877.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
9808.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
9796.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
9643.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
9535.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
9519.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9456.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
9454.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9424.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9254.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
9222.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9203.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
9195.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
9172.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
9122.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9102.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
9069.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
9035.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
9030.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
8997.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
8959.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
8955.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
8918.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8855.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
8747.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8688.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8672.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
8594.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
8570.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8482.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8461.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
8401.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8394.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
8364.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
8357.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8325.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8230.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
8209.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
8193.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
8106.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
8100.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
8099.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
7927.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7844.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
7785.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
7766.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7752.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
7748.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
7679.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
7606.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
7537.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
7427.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
7408.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7294.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7291.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
7266.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
7248.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
7222.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7221.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7209.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7201.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
7198.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
7194.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
7082.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
7072.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
7065.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
7057.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7006.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
7002.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6917.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
6804.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6760.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
6712.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
6659.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6555.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
6460.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
6447.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
6386.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6364.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6090.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
6083.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
6050.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6034.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5991.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
5941.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5850.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
5834.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5782.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
5781.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
5716.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
5708.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
5627.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5623.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5603.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5585.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5509.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
5498.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5372.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
5350.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5324.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
5178.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5156.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
5147.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
5001.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4996.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4913.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4901.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
4833.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
4709.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
4571.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
4570.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
4521.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
4468.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
4347.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4306.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
4090.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
4083.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4045.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
3946.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
3903.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
3814.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
3667.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
3656.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
3619.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3615.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
3573.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
3571.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
3531.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
3502.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
3462.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
3321.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
3259.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
2866.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2839.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
2559.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
2427.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
2417.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
2392.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
2376.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
2323.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
2261.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2194.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
2137.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
2101.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1999.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
1747.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
635.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
303.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
211.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
81.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SERPINA1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6864.3
Number of samples
231
Samples
Sample
Description
TPM
DO45191
0 years, female, NA, stage:2, alive, 1200 days
25538.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
22292.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
20913.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
19493.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
19214.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
18625.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
17219.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
16138.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
15978.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
15852.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
15820.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
15590.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
15544.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
15312.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
14966.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
14872.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
14750.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
14319.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
14299.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
13954.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
13514.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
13202.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
13063.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
13040.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
12986.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
12790.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
12760.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
12568.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
12538.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
12318.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
12212.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
12051.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
11812.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
11772.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
11592.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
11380.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
11026.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
10874.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
10826.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
10760.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
10738.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
10691.9
DO48728
0 years, female, NA, stage:2, alive, 150 days
10691.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
10437.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
10391.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
10352.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
10238.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
10222.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
10221.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
10189.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
10031.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
9925.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
9912.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
9855.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
9848.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
9813.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
9743.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
9706.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
9423.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
9422.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
9289.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
9247.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
9216.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
9064.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
8911.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
8681.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
8676.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8403.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
8398.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
8393.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
8249.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
8197.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
8062.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
8029.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
8002.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
7922.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7901.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
7763.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
7740.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
7640.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
7626.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
7565.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
7561.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7519.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
7470.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
7395.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
7256.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7227.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
7187.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
7121.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
7118.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
7091.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
7013.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
7003.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
6985.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
6983.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
6885.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
6882.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
6794.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
6787.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
6779.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6615.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
6610.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
6547.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
6460.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
6423.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
6396.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
6387.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
6333.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
6318.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
6266.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
6182.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6122.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
6096.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
6075.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
6020.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
6017.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
6010.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
5960.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
5955.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
5948.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
5930.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
5926.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
5909.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
5882.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
5870.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
5859.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
5759.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
5609.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
5433.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
5356.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
5290.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
5279.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
5231.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
5131.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
5119.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
5096.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
5089.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
5073.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
5044.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
5036.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
4930.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
4865.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
4734.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
4734.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
4733.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
4700.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
4639.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
4623.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
4602.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
4596.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
4566.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
4522.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
4488.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
4482.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
4407.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
4391.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
4362.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
4228.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
4169.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
4157.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
4127.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
4103.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
3999.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
3960.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
3952.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
3866.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
3784.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
3779.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
3592.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
3566.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
3501.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
3500.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
3479.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
3478.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
3460.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
3398.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
3365.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
3346.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
3294.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
3157.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
3085.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
3005.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
2918.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
2912.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
2891.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
2852.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
2801.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
2683.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
2636.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
2632.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
2618.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
2548.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
2519.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
2475.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
2384.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
2331.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
2253.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
2223.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
2184.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
2176.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
2111.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
2064.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
2010.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
1949.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
1873.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
1824.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
1736.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
1689.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
1592.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
1401.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
1352.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
1347.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
1339.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
1319.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
1277.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
1233.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
1022.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
907.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
799.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
793.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
604.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
559.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
533.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
322.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
254.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
249.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
231.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
52.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
29.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
19.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
535
Tumor
1.8
877
Tumor
1.8
343
Tumor
1.6
815
Tumor
1.6
671
Tumor
1.4
743
Tumor
1.3
813
Tumor
1.3
713
Tumor
1.3
536
Normal
1.2
135
Tumor
1.2
697
Tumor
1.2
192
Normal
1.1
863
Tumor
1.1
125
Tumor
1.0
224
Normal
1.0
223
Tumor
0.9
375
Tumor
0.9
283
Tumor
0.8
983
Tumor
0.8
425
Tumor
0.8
665
Tumor
0.8
975
Tumor
0.8
745
Tumor
0.8
395
Tumor
0.7
311
Tumor
0.7
497
Tumor
0.7
672
Normal
0.7
857
Tumor
0.6
384
Normal
0.6
498
Normal
0.6
393
Tumor
0.6
444
Normal
0.6
391
Tumor
0.6
471
Tumor
0.5
814
Normal
0.5
785
Tumor
0.5
517
Tumor
0.5
817
Tumor
0.5
217
Tumor
0.5
557
Tumor
0.5
297
Tumor
0.4
967
Tumor
0.4
527
Tumor
0.4
331
Tumor
0.4
558
Normal
0.4
524
Normal
0.4
385
Tumor
0.4
1044
Normal
0.4
917
Tumor
0.4
1045
Tumor
0.4
851
Tumor
0.4
641
Tumor
0.4
523
Tumor
0.4
191
Tumor
0.4
617
Tumor
0.4
953
Tumor
0.4
261
Tumor
0.3
1041
Tumor
0.3
383
Tumor
0.3
573
Tumor
0.3
545
Tumor
0.3
636
Normal
0.3
491
Tumor
0.3
884
Normal
0.3
881
Tumor
0.3
958
Normal
0.3
981
Tumor
0.3
968
Normal
0.3
363
Tumor
0.3
447
Tumor
0.3
126
Normal
0.3
568
Normal
0.3
228
Normal
0.2
187
Tumor
0.2
956
Normal
0.2
488
Normal
0.2
455
Tumor
0.2
367
Tumor
0.2
553
Tumor
0.2
563
Tumor
0.2
737
Tumor
0.2
467
Tumor
0.2
494
Normal
0.2
195
Tumor
0.2
741
Tumor
0.2
526
Normal
0.2
131
Tumor
0.2
924
Normal
0.2
574
Normal
0.2
344
Normal
0.2
982
Normal
0.2
396
Normal
0.2
352
Normal
0.2
852
Normal
0.2
227
Tumor
0.2
421
Tumor
0.2
218
Normal
0.1
448
Normal
0.1
954
Normal
0.1
778
Normal
0.1
368
Normal
0.1
984
Normal
0.1
695
Tumor
0.1
1026
Normal
0.1
285
Tumor
0.1
492
Normal
0.1
354
Normal
0.1
353
Tumor
0.1
1022
Normal
0.1
546
Normal
0.1
212
Normal
0.1
921
Tumor
0.1
284
Normal
0.1
392
Normal
0.1
328
Normal
0.1
286
Normal
0.1
744
Normal
0.1
866
Normal
0.1
1025
Tumor
0.1
514
Normal
0.1
137
Tumor
0.1
685
Tumor
0.1
572
Normal
0.1
1042
Normal
0.1
332
Normal
0.1
422
Normal
0.1
364
Normal
0.1
113
Tumor
0.1
951
Tumor
0.1
445
Tumor
0.1
474
Normal
0.0
1028
Normal
0.0
394
Normal
0.0
433
Tumor
0.0
463
Tumor
0.0
722
Normal
0.0
723
Tumor
0.0
865
Tumor
0.0
1015
Tumor
0.0
715
Tumor
0.0
696
Normal
0.0
525
Tumor
0.0
686
Normal
0.0
916
Normal
0.0
312
Normal
0.0
922
Normal
0.0
342
Normal
0.0
571
Tumor
0.0
918
Normal
0.0
615
Tumor
0.0
926
Normal
0.0
938
Normal
0.0
478
Normal
0.0
468
Normal
0.0
142
Normal
0.0
188
Normal
0.0
627
Tumor
0.0
413
Tumor
0.0
451
Tumor
0.0
966
Normal
0.0
635
Tumor
0.0
816
Normal
0.0
528
Normal
0.0
883
Tumor
-0.1
376
Normal
-0.1
1043
Tumor
-0.1
716
Normal
-0.1
1014
Normal
-0.1
963
Tumor
-0.1
232
Normal
-0.1
976
Normal
-0.1
358
Normal
-0.1
221
Tumor
-0.1
862
Normal
-0.1
666
Normal
-0.1
944
Normal
-0.1
1046
Normal
-0.1
661
Tumor
-0.1
823
Tumor
-0.1
424
Normal
-0.1
628
Normal
-0.1
185
Tumor
-0.1
124
Normal
-0.1
567
Tumor
-0.1
186
Normal
-0.1
361
Tumor
-0.1
1027
Tumor
-0.1
721
Tumor
-0.1
642
Normal
-0.1
386
Normal
-0.1
662
Normal
-0.1
618
Normal
-0.1
434
Normal
-0.1
964
Normal
-0.1
777
Tumor
-0.1
538
Normal
-0.1
728
Normal
-0.1
426
Normal
-0.1
213
Tumor
-0.1
387
Tumor
-0.1
351
Tumor
-0.1
868
Normal
-0.1
516
Normal
-0.1
138
Normal
-0.2
145
Tumor
-0.2
487
Tumor
-0.2
564
Normal
-0.2
214
Normal
-0.2
746
Normal
-0.2
461
Tumor
-0.2
648
Normal
-0.2
196
Normal
-0.2
952
Normal
-0.2
1016
Normal
-0.2
355
Tumor
-0.2
414
Normal
-0.2
472
Normal
-0.2
415
Tumor
-0.2
864
Normal
-0.2
647
Tumor
-0.2
616
Normal
-0.2
1021
Tumor
-0.2
738
Normal
-0.2
518
Normal
-0.2
663
Tumor
-0.2
878
Normal
-0.2
114
Normal
-0.2
554
Normal
-0.2
146
Normal
-0.2
327
Tumor
-0.2
965
Tumor
-0.2
914
Normal
-0.2
493
Tumor
-0.2
955
Tumor
-0.2
513
Tumor
-0.2
664
Normal
-0.2
257
Tumor
-0.2
978
Normal
-0.2
818
Normal
-0.2
365
Tumor
-0.2
1032
Normal
-0.2
388
Normal
-0.2
432
Normal
-0.2
277
Tumor
-0.2
111
Normal
-0.2
416
Normal
-0.2
141
Tumor
-0.3
362
Normal
-0.3
481
Tumor
-0.3
861
Tumor
-0.3
356
Normal
-0.3
211
Tumor
-0.3
858
Normal
-0.3
756
Normal
-0.3
314
Normal
-0.3
943
Tumor
-0.3
431
Tumor
-0.3
515
Tumor
-0.3
136
Normal
-0.3
262
Normal
-0.3
452
Normal
-0.3
923
Tumor
-0.3
724
Normal
-0.3
341
Tumor
-0.3
698
Normal
-0.3
112
Tumor
-0.3
271
Tumor
-0.3
446
Normal
-0.3
882
Normal
-0.3
742
Normal
-0.3
462
Normal
-0.3
466
Normal
-0.3
482
Normal
-0.4
824
Normal
-0.4
464
Normal
-0.4
786
Normal
-0.4
977
Tumor
-0.4
484
Normal
-0.4
443
Tumor
-0.4
148
Normal
-0.4
456
Normal
-0.4
428
Normal
-0.4
267
Tumor
-0.4
534
Normal
-0.4
915
Tumor
-0.4
912
Normal
-0.4
714
Normal
-0.4
755
Tumor
-0.4
128
Normal
-0.4
268
Normal
-0.4
132
Normal
-0.5
483
Tumor
-0.5
313
Tumor
-0.5
423
Tumor
-0.5
147
Tumor
-0.5
873
Tumor
-0.5
874
Normal
-0.5
911
Tumor
-0.5
272
Normal
-0.5
937
Tumor
-0.5
298
Normal
-0.5
258
Normal
-0.5
278
Normal
-0.5
357
Tumor
-0.5
366
Normal
-0.5
412
Normal
-0.5
222
Normal
-0.5
727
Tumor
-0.6
925
Tumor
-0.6
957
Tumor
-0.6
172
Normal
-0.6
913
Tumor
-0.6
411
Tumor
-0.6
231
Tumor
-0.6
867
Tumor
-0.7
162
Normal
-0.8
427
Tumor
-0.8
465
Tumor
-0.8
436
Normal
-0.9
127
Tumor
-0.9
477
Tumor
-0.9
1031
Tumor
-0.9
435
Tumor
-0.9
537
Tumor
-0.9
1013
Tumor
-0.9
473
Tumor
-0.9
123
Tumor
-1.0
533
Tumor
-1.1
161
Tumor
-1.1
171
Tumor
-1.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.