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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SND1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
64.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
207.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
134.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
134.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
132.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
123.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
118.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
113.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
108.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
107.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
95.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
93.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
92.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
89.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
84.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
82.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
76.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
75.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
74.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
73.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
73.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
73.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
71.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
71.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
66.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
64.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
64.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
62.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
62.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
61.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
60.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
56.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
55.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
55.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
54.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
54.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
54.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
53.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
53.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
52.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
52.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
50.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
49.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
49.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
48.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
46.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
43.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
41.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
41.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
40.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
39.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
38.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
37.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
36.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
32.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
31.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
30.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
30.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
28.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
28.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
26.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
23.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
17.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
10.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SND1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
76.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
294.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
238.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
201.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
197.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
171.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
169.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
155.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
151.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
149.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
147.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
147.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
147.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
141.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
140.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
138.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
137.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
137.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
137.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
136.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
133.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
133.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
132.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
132.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
132.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
130.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
130.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
130.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
129.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
128.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
128.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
127.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
127.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
126.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
124.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
122.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
121.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
120.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
119.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
119.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
118.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
118.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
117.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
116.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
116.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
116.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
116.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
116.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
115.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
115.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
115.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
114.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
114.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
114.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
112.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
112.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
112.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
111.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
110.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
110.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
110.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
110.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
109.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
109.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
109.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
108.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
108.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
108.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
107.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
107.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
107.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
107.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
107.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
106.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
106.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
106.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
106.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
105.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
105.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
104.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
104.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
104.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
104.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
103.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
103.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
102.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
101.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
101.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
100.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
100.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
100.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
99.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
99.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
99.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
98.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
98.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
98.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
98.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
97.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
97.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
97.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
97.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
97.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
97.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
97.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
97.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
97.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
97.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
97.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
97.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
96.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
96.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
96.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
96.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
96.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
95.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
95.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
95.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
94.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
94.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
94.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
94.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
94.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
94.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
94.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
94.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
93.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
93.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
93.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
93.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
92.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
92.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
92.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
92.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
92.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
92.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
92.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
91.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
91.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
91.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
91.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
91.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
91.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
91.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
91.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
91.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
91.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
90.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
90.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
90.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
90.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
90.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
90.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
90.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
90.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
89.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
89.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
89.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
89.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
89.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
89.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
89.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
89.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
89.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
89.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
88.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
88.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
88.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
88.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
88.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
88.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
88.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
87.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
87.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
87.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
87.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
86.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
86.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
86.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
86.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
86.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
86.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
86.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
86.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
85.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
85.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
85.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
85.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
85.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
85.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
85.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
85.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
85.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
85.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
85.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
85.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
84.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
84.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
84.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
84.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
84.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
84.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
84.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
83.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
83.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
83.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
83.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
83.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
83.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
82.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
82.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
82.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
82.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
82.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
81.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
81.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
81.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
81.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
81.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
81.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
81.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
81.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
80.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
80.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
80.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
80.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
80.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
80.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
80.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
80.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
80.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
80.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
80.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
80.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
80.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
80.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
79.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
79.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
79.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
79.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
79.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
79.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
78.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
78.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
78.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
78.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
77.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
77.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
77.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
77.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
77.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
77.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
77.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
77.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
77.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
77.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
77.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
76.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
76.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
76.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
76.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
76.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
76.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
76.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
76.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
76.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
75.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
75.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
75.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
75.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
75.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
75.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
75.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
75.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
75.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
75.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
74.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
74.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
74.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
74.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
74.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
74.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
74.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
73.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
73.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
73.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
73.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
73.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
73.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
73.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
73.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
73.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
73.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
73.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
73.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
73.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
72.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
72.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
72.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
72.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
72.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
72.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
72.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
72.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
72.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
72.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
71.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
71.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
71.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
71.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
71.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
71.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
71.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
70.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
70.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
70.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
70.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
70.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
70.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
70.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
70.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
69.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
69.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
69.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
69.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
69.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
69.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
69.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
68.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
68.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
68.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
68.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
68.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
68.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
68.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
68.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
67.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
67.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
67.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
67.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
67.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
67.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
67.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
67.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
66.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
66.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
66.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
66.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
66.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
65.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
65.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
64.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
64.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
64.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
64.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
64.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
64.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
64.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
64.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
64.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
63.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
63.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
63.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
63.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
63.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
63.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
63.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
62.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
62.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
62.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
61.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
61.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
61.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
61.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
61.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
61.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
61.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
61.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
60.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
60.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
60.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
60.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
60.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
60.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
59.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
59.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
59.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
59.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
59.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
59.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
59.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
59.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
58.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
58.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
58.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
57.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
57.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
57.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
57.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
56.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
56.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
56.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
56.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
56.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
56.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
56.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
56.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
56.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
55.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
55.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
55.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
55.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
55.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
55.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
54.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
54.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
54.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
54.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
53.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
53.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
53.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
52.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
52.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
51.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
50.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
50.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
50.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
49.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
49.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
48.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
48.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
48.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
48.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
47.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
47.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
47.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
47.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
47.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
46.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
46.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
46.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
45.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
45.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
44.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
44.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
43.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
43.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
43.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
43.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
43.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
43.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
42.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
42.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
42.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
42.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
41.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
40.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
40.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
39.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
39.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
38.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
38.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
37.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
37.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
37.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
36.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
36.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
35.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
35.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
35.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
35.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
34.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
34.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
34.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
32.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
32.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
31.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
31.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
31.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
30.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
30.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
30.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
30.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
30.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
28.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
28.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
26.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
26.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
25.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
25.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
25.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
24.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
24.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
23.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
23.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
23.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
22.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
22.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
21.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
20.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
18.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
18.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
18.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
17.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
17.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
17.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
16.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
14.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
14.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
14.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
13.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SND1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
77.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
158.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
142.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
130.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
128.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
113.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
112.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
110.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
106.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
104.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
103.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
101.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
101.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
100.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
100.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
99.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
98.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
96.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
95.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
95.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
95.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
94.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
93.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
92.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
89.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
88.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
88.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
88.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
87.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
87.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
87.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
86.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
85.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
84.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
82.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
81.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
81.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
80.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
80.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
80.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
80.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
79.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
78.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
78.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
78.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
78.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
78.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
77.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
76.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
76.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
75.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
75.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
75.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
73.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
73.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
73.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
73.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
72.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
72.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
72.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
71.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
71.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
71.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
70.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
69.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
68.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
68.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
67.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
67.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
67.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
67.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
66.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
66.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
65.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
65.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
63.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
63.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
62.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
61.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
61.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
61.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
60.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
60.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
59.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
59.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
59.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
58.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
57.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
55.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
54.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
54.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
54.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
52.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
48.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
45.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
43.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
42.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
33.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
31.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
31.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SND1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
70.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
205.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
181.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
168.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
154.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
139.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
139.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
137.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
135.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
134.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
133.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
133.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
132.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
131.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
130.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
129.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
129.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
129.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
126.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
125.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
125.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
123.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
121.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
121.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
121.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
120.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
118.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
116.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
115.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
115.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
115.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
114.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
113.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
113.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
112.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
112.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
111.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
110.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
109.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
109.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
108.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
107.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
106.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
105.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
105.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
105.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
105.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
104.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
104.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
103.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
102.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
101.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
101.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
101.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
101.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
99.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
98.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
98.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
98.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
98.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
95.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
95.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
95.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
94.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
94.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
94.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
94.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
93.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
93.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
92.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
92.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
92.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
92.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
92.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
92.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
91.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
91.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
90.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
89.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
89.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
89.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
89.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
89.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
88.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
88.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
88.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
87.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
87.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
86.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
86.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
85.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
84.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
84.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
84.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
84.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
84.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
84.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
83.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
82.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
82.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
82.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
82.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
81.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
81.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
80.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
80.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
80.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
79.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
78.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
78.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
78.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
78.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
77.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
77.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
77.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
77.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
76.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
76.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
76.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
76.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
76.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
76.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
75.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
75.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
75.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
75.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
74.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
74.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
74.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
73.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
73.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
73.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
72.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
72.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
72.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
71.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
71.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
71.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
70.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
70.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
70.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
70.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
70.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
69.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
69.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
69.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
69.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
68.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
68.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
68.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
68.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
66.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
66.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
66.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
65.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
64.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
64.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
63.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
63.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
63.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
63.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
62.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
62.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
61.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
61.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
61.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
61.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
61.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
60.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
60.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
60.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
59.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
59.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
58.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
58.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
58.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
58.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
58.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
57.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
57.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
57.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
57.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
56.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
56.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
55.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
55.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
55.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
55.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
54.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
54.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
54.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
54.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
53.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
53.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
53.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
52.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
52.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
52.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
52.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
51.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
50.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
50.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
50.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
50.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
50.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
49.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
49.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
49.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
49.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
49.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
48.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
47.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
46.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
46.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
46.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
45.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
45.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
44.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
44.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
44.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
43.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
43.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
43.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
42.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
42.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
42.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
41.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
41.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
40.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
40.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
39.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
39.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
39.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
38.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
36.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
34.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
33.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
32.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
32.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
32.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
31.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
30.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
30.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
30.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
29.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
29.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
28.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
28.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
28.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
28.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
28.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
27.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
25.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
24.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
24.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
23.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
22.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
21.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
21.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
21.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
21.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
21.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
20.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
20.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
18.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
18.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
17.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
16.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
14.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
11.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
9.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
7.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.9
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
1.0
CPT0012180003
Tumor
0.7
CPT0011410003
Tumor
0.6
CPT0001340003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0014450004
Tumor
0.6
CPT0025880003
Tumor
0.6
CPT0023350003
Tumor
0.6
CPT0002350011
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0078800003
Tumor
0.5
CPT0001180009
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0079410003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0077110003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0081990003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0006630003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0009060003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0079180003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0012770003
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0018250001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0078660003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0019160001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0079510001
Normal
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.