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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STRN3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
50.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
40.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
33.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
29.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
23.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
22.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
22.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
21.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
20.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
19.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
18.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
17.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
16.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
15.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
15.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
15.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
14.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
14.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
13.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
13.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
13.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
13.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
12.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
12.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
12.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
12.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
11.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
11.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
10.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
10.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
10.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
9.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
8.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
6.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
6.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
6.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
5.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
5.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STRN3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
75.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
30.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
30.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
30.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
28.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
26.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
25.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
25.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
25.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
23.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
23.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
23.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
23.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
23.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
23.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
23.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
22.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
22.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
21.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
21.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
21.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
20.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
20.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
20.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
20.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
20.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
20.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
20.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
19.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
19.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
19.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
19.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
19.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
18.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
18.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
18.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
18.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
18.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
18.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
17.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
17.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
17.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
17.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
17.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
17.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
17.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
17.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
17.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
17.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
17.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
17.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
17.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
17.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
17.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
16.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
16.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
16.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
16.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
16.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
16.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
16.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
16.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
16.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
15.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
15.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
15.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
15.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
15.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
15.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
15.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
15.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
15.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
15.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
15.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
15.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
15.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
15.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
15.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
15.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
14.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
14.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
14.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
14.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
14.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
14.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
14.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
14.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
14.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
14.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
14.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
14.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
14.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
14.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
14.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
14.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
14.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
14.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
14.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
13.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
13.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
13.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
13.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
13.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
13.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
13.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
13.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
13.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
13.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
13.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
13.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
13.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
13.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
13.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
13.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
13.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
13.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
12.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
12.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
12.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
12.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
12.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
12.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
12.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
12.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
12.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
12.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
12.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
12.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
12.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
12.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
12.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
12.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
12.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
12.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
12.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
12.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
12.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
12.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
12.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
11.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
11.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
11.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
11.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
11.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
11.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
11.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
11.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
11.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
11.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
11.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
11.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
11.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
11.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
11.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
11.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
11.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
11.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
11.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
11.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
11.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
10.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
10.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
10.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
10.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
10.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
10.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
10.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
10.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
10.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
10.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
10.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
10.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
10.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
10.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
10.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
10.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
10.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
10.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
10.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
10.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
10.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
10.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
10.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
9.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
9.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
9.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
9.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
9.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
9.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
9.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
9.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
9.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
9.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
9.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
9.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
9.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
9.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
9.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
9.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
9.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
9.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
8.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
8.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
8.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
8.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
8.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
8.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
8.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
8.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
8.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
8.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
8.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
8.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
8.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
8.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
8.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
8.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
8.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
8.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
8.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
8.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
8.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
7.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
7.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
7.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
7.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
7.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
7.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
7.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
7.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
7.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
6.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
6.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
6.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
6.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
6.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
6.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
6.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
6.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
6.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
6.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
6.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
6.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
6.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
6.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
6.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
6.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
5.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
5.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
5.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
5.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
5.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
5.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
5.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
5.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
5.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
5.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
5.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
5.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
5.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
5.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
5.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
5.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
4.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
4.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
4.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
4.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
4.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
4.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
3.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
3.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
3.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
3.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
3.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STRN3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
37.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
31.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
30.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
28.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
27.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
26.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
24.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
24.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
23.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
22.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
22.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
21.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
21.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
20.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
20.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
20.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
20.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
20.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
19.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
19.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
19.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
18.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
18.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
18.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
18.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
18.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
18.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
17.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
17.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
17.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
17.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
16.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
15.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
15.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
15.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
15.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
15.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
14.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
14.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
14.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
14.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
13.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
13.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
13.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
13.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
13.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
13.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
12.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
12.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
11.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
11.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
11.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
10.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
10.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
10.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
10.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
10.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
10.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
10.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
10.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
9.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
9.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
9.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
8.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
8.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
8.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
8.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
8.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
7.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
6.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
6.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
STRN3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
47.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
37.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
34.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
29.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
26.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
25.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
24.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
21.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
21.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
21.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
20.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
20.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
20.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
20.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
20.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
20.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
20.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
20.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
19.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
19.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
19.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
18.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
18.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
18.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
17.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
17.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
17.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
17.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
17.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
17.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
17.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
17.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
17.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
17.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
17.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
16.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
16.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
16.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
15.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
15.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
15.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
15.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
15.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
15.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
15.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
15.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
14.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
14.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
14.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
14.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
14.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
14.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
14.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
14.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
14.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
13.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
13.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
13.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
13.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
13.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
13.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
13.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
12.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
12.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
12.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
12.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
12.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
12.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
12.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
12.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
12.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
12.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
11.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
11.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
11.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
11.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
11.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
11.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
11.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
11.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
11.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
11.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
11.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
11.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
11.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
11.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
10.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
10.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
10.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
10.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
10.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
10.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
10.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
10.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
10.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
10.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
10.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
10.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
9.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
9.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
9.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
9.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
9.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
9.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
9.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
9.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
9.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
9.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
9.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
9.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
9.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
9.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
9.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
8.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
8.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
8.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
8.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
8.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
8.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
8.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
8.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
8.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
8.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
8.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
8.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
8.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
7.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
7.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
7.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
7.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
7.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
7.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
7.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
7.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
7.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
7.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
7.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
7.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
7.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
7.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
7.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
6.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
6.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
6.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
6.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
6.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
6.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
6.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
6.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
6.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
6.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
6.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
6.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
5.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
5.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
5.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
5.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
5.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
5.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
5.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
5.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
5.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
4.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
4.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
4.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
4.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
4.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
4.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
4.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
4.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
4.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
3.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
3.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
2.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
2.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.5
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011410003
Tumor
0.6
CPT0012550003
Tumor
0.6
CPT0011240003
Tumor
0.6
CPT0078660003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0069160003
Tumor
0.4
CPT0000780007
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0088900003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0010120001
Normal
0.3
CPT0019130003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0075720003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0077490003
Tumor
0.3
CPT0075130003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0066480003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0012090003
Normal
0.2
CPT0000640003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0025610001
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0092730003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0000660001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0079380003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0075570001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0010160003
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0092190003
Normal
0.2
CPT0025110003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0009020003
Normal
0.1
CPT0000790001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0066470004
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0017450001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0007470001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0001550001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0078940001
Normal
0.1
CPT0065450001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0002350011
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0082010001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0077500001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0009060003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0078800003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0001230001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0086890003
Normal
0.0
CPT0088500001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0019990003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0088550004
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0017410003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0076350001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0065930003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0065430003
Tumor
-0.2
CPT0079410003
Tumor
-0.2
CPT0015730003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0012180003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0001340003
Tumor
-0.5
CPT0001500009
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
