HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:12.2 nTPM
HPA Brain:58.7 nTPM
GTEx:12.2 nTPM
FANTOM5:69.4 Scaled Tags Per Million
Pig:65.7 nTPM
Mouse:32.7 nTPM
Allen mouse:19.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003183
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 58.7
Sample id Sample description nTPM
Hippocampus
nTPM: 58.7
2529 Female, age 94, left hemisphere 66.3
1855 Male, age 76, left hemisphere 64.8
2621 Female, age 67, right hemisphere 60.7
1898 Male, age 80, left hemisphere 56.9
1911 Female, age 85, right hemisphere 53.1
2148 Female, age 91, left hemisphere 50.3
Dentate gyrus
nTPM: 50.4
2530 Female, age 94, left hemisphere 57.3
2010 Male, age 76, both hemispheres 54.7
2246 Female, age 85, both hemispheres 51.2
2528 Male, age 74, both hemispheres 47.9
1927 Female, age 91, both hemispheres 46.2
2531 Female, age 67, both hemispheres 45.1
Entorhinal gyrus
nTPM: 56.5
2117 Female, age 91, right hemisphere 68.3
2613 Female, age 94, left hemisphere 56.7
1787 Male, age 76, left hemisphere 55.9
1938 Female, age 85, left hemisphere 55.1
2686 Male, age 75, right hemisphere 53.0
2764 Male, age 80, right hemisphere 49.9
Hippocampus, CA1
nTPM: 54.7
2749 Male, age 80, left hemisphere 67.7
2527 Male, age 74, both hemispheres 59.3
2045 Male, age 76, both hemispheres 56.5
1873 Female, age 85, both hemispheres 51.7
2082 Female, age 91, right hemisphere 38.4
Hippocampus, CA2
nTPM: 52.3
1892 Male, age 76, both hemispheres 61.3
2437 Female, age 94, left hemisphere 56.7
1963 Male, age 80, left hemisphere 56.6
2113 Female, age 91, right hemisphere 47.5
1940 Female, age 85, left hemisphere 47.0
2249 Male, age 74, both hemispheres 45.0
Hippocampus, CA3
nTPM: 49.0
2861 Female, age 67, both hemispheres 57.4
2620 Female, age 94, left hemisphere 52.7
2137 Male, age 80, left hemisphere 49.3
1891 Female, age 85, both hemispheres 47.2
1867 Male, age 76, both hemispheres 46.9
2436 Male, age 74, both hemispheres 40.6
Parahippocampal cortex
nTPM: 50.3
2692 Male, age 74, both hemispheres 58.3
2693 Female, age 94, both hemispheres 54.2
1933 Female, age 85, both hemispheres 54.1
2245 Female, age 91, both hemispheres 53.8
2250 Female, age 67, right hemisphere 53.2
2622 Female, age 67, right hemisphere 50.1
1850 Male, age 80, both hemispheres 46.8
2532 Female, age 72, left hemisphere 46.6
1990 Female, age 91, right hemisphere 43.9
2018 Male, age 76, both hemispheres 41.7
Perirhinal gyrus
nTPM: 51.0
2521 Female, age 94, right hemisphere 59.9
1794 Male, age 80, right hemisphere 51.6
1847 Female, age 91, left hemisphere 51.5
2848 Male, age 76, right hemisphere 49.9
1841 Female, age 85, right hemisphere 42.0
Subiculum
nTPM: 58.5
2438 Female, age 94, left hemisphere 73.8
2042 Male, age 76, both hemispheres 64.0
2619 Male, age 74, both hemispheres 58.3
1901 Male, age 80, both hemispheres 54.8
1977 Female, age 85, both hemispheres 51.2
2729 Female, age 91, right hemisphere 49.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.2
Samples: 197

Max nTPM: 29.8
Min nTPM: 2.2
Std nTPM: 5.6
Median nTPM: 11.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 29.8
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 29.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 29.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 27.6
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 26.4
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 26.3
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 23.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 22.9
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 22.7
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 22.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 21.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 69.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.4
FF:10153-102I9 76 years, female 89.1
FF:10169-103B7 60 years, female 49.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 65.7
Pig sample Sample description nTPM
Subiculum
nTPM: 61.1
Samples: 4

Max nTPM: 77.3
Min nTPM: 50.6
Sample A Female 77.3
Sample B Female 54.7
Sample C Male 61.8
Sample D Male 50.6
Dorsal hippocampus
nTPM: 62.1
Samples: 4

Max nTPM: 75.1
Min nTPM: 47.6
Sample A Female 75.1
Sample B Female 66.7
Sample C Male 59.1
Sample D Male 47.6
Entorhinal cortex
nTPM: 55.2
Samples: 4

Max nTPM: 65.0
Min nTPM: 47.0
Sample A Female 65.0
Sample B Female 47.0
Sample C Male 56.9
Sample D Male 51.7
Ventral hippocampus
nTPM: 65.7
Samples: 4

Max nTPM: 84.1
Min nTPM: 49.6
Sample A Female 65.7
Sample B Female 49.6
Sample C Male 84.1
Sample D Male 63.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 32.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.5
Samples: 4

Max nTPM: 40.8
Min nTPM: 28.3
Sample A Male 30.3
Sample B Male 30.5
Sample C Female 28.3
Sample D Female 40.8
Hippocampal formation
nTPM: 32.7
Samples: 4

Max nTPM: 39.6
Min nTPM: 27.2
Sample A Male 27.2
Sample B Male 39.6
Sample C Female 35.9
Sample D Female 28.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 19.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.7
70300559 Antisense, RP_050607_01_G09, Mouse strain C57BL/6J (56 days, male) 19.7

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