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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
14.5
nTPM
HPA Brain:
60.1
nTPM
GTEx:
14.5
nTPM
FANTOM5:
86.3
Scaled Tags Per Million
Pig:
59.1
nTPM
Mouse:
33.1
nTPM
Allen mouse:
21.9
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
60.1
Sample id
Sample description
nTPM
Amygdala nTPM: 60.1
2514
Male, age 75, right hemisphere
75.5
2517
Female, age 94, left hemisphere
65.4
2695
Female, age 67, right hemisphere
54.6
2814
Male, age 76, right hemisphere
53.3
1987
Female, age 91, left hemisphere
51.5
Basal amygdala nTPM: 55.2
2609
Male, age 75, right hemisphere
78.2
2685
Female, age 94, left hemisphere
55.9
2243
Female, age 91, right hemisphere
53.5
2827
Female, age 67, right hemisphere
51.3
1955
Male, age 76, both hemispheres
46.3
2110
Male, age 80, left hemisphere
45.9
Central amygdala nTPM: 55.9
2515
Male, age 75, right hemisphere
62.5
2239
Male, age 80, left hemisphere
56.4
2701
Female, age 91, right hemisphere
56.0
2826
Female, age 94, left hemisphere
53.4
1905
Male, age 76, both hemispheres
51.1
Corticomedial amygdala nTPM: 56.5
2428
Male, age 75, right hemisphere
66.1
2429
Female, age 94, left hemisphere
60.7
2829
Male, age 80, left hemisphere
58.6
2242
Female, age 91, right hemisphere
54.7
2535
Female, age 67, right hemisphere
50.7
2240
Male, age 76, both hemispheres
48.1
Lateral amygdala nTPM: 53.0
2516
Male, age 75, right hemisphere
68.2
2255
Female, age 91, right hemisphere
53.7
2256
Male, age 80, left hemisphere
52.9
2534
Female, age 94, left hemisphere
52.0
2830
Female, age 67, right hemisphere
46.1
1883
Male, age 76, both hemispheres
45.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
14.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 14.5
Samples: 152
Max nTPM: 39.0
Min nTPM: 0.9
Std nTPM: 6.8
Median nTPM: 13.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
39.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
32.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
31.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
29.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
28.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
28.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
27.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
27.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
26.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
26.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
26.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
26.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
26.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
25.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
24.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
24.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
23.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
22.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
22.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
22.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
22.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
22.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
22.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
22.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
21.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
21.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
20.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
20.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
20.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
20.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
20.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
20.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
20.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
19.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
19.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
19.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
19.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
19.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
18.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
18.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
18.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
17.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
17.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
17.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
17.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
17.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
17.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
17.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
17.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
17.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
17.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
17.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
16.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
16.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
16.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
15.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
14.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
14.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
14.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
14.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
14.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
14.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
14.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
14.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
14.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
14.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
13.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
13.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
13.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
13.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
13.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
13.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
13.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
13.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
13.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
13.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
13.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
12.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
12.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
12.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
12.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
12.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
12.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
12.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
12.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
12.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
12.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
12.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
12.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
12.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
12.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
11.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
11.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
11.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
11.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
11.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
11.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
11.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
11.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
10.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
10.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
10.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
10.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
10.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
10.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
10.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
10.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
10.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
10.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
10.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
10.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
10.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
10.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
10.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
10.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
9.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
9.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
9.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
9.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
8.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
8.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
8.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
8.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
8.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
8.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
8.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
8.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
7.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
7.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
7.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
7.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
7.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
7.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
7.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
7.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
6.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
6.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
6.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
6.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
5.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
5.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
5.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
5.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
5.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
5.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
5.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
4.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
4.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
4.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
3.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
2.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
0.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
33.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 33.1
Samples: 4
Max nTPM: 38.9
Min nTPM: 29.0
Sample A
Male
38.9
Sample B
Male
31.4
Sample C
Female
29.0
Sample D
Female
32.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.