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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
72.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
1600.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
903.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
187.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
159.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
86.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
74.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
67.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
66.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
61.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
56.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
50.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
46.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
46.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
45.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
45.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
45.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
44.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
43.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
42.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
42.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
42.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
40.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
39.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
36.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
35.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
35.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
30.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
30.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
30.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
30.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
30.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
29.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
25.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
24.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
24.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
24.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
23.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
22.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
21.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
19.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
19.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
18.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
18.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
18.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
17.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
17.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
16.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
15.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
15.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
14.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
14.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
13.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
11.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
4.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A4 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
212.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3414.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
2737.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1447.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
1040.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
788.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
733.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
659.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
650.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
589.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
543.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
534.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
529.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
525.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
482.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
475.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
471.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
467.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
465.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
462.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
455.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
450.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
449.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
441.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
428.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
424.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
410.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
408.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
405.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
404.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
398.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
398.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
392.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
389.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
383.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
379.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
378.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
372.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
365.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
361.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
356.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
356.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
350.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
346.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
337.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
334.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
330.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
329.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
329.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
328.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
328.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
328.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
326.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
324.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
323.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
320.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
319.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
318.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
318.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
315.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
313.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
312.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
311.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
310.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
309.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
308.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
307.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
307.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
306.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
306.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
305.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
303.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
303.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
300.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
300.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
300.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
300.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
299.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
298.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
296.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
296.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
295.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
294.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
294.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
291.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
290.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
290.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
289.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
289.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
288.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
287.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
285.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
284.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
283.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
283.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
281.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
281.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
280.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
280.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
277.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
275.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
275.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
274.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
273.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
272.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
271.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
271.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
269.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
269.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
269.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
268.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
267.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
267.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
266.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
266.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
265.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
263.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
263.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
262.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
262.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
260.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
260.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
259.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
259.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
257.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
254.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
254.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
253.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
253.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
252.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
250.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
250.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
248.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
248.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
248.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
245.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
245.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
245.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
243.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
242.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
242.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
242.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
241.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
241.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
240.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
240.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
239.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
239.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
239.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
239.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
238.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
238.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
236.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
235.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
235.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
233.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
233.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
233.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
233.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
232.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
232.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
231.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
231.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
231.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
231.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
230.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
230.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
229.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
229.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
227.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
227.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
227.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
226.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
226.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
225.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
224.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
224.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
224.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
224.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
224.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
224.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
224.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
224.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
222.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
220.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
219.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
219.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
217.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
216.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
216.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
214.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
213.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
213.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
213.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
212.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
211.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
210.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
210.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
208.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
208.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
206.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
205.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
205.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
204.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
203.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
203.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
202.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
202.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
202.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
202.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
201.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
201.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
201.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
200.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
198.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
198.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
196.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
196.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
195.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
194.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
193.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
192.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
191.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
191.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
190.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
190.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
190.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
190.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
190.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
189.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
188.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
188.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
188.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
188.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
188.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
188.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
188.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
188.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
187.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
187.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
186.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
186.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
186.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
186.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
185.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
185.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
184.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
183.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
182.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
181.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
181.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
180.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
180.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
180.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
179.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
178.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
178.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
178.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
178.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
177.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
177.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
177.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
176.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
176.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
175.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
175.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
175.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
175.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
174.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
174.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
174.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
174.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
173.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
173.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
173.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
172.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
172.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
172.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
172.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
170.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
170.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
169.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
169.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
169.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
169.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
169.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
169.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
167.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
166.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
166.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
166.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
166.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
164.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
162.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
162.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
162.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
162.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
162.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
161.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
160.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
160.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
160.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
159.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
159.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
159.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
158.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
158.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
158.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
158.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
157.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
157.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
156.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
156.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
156.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
156.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
155.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
155.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
154.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
154.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
154.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
153.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
153.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
152.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
152.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
151.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
151.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
150.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
150.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
150.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
149.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
148.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
148.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
148.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
148.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
147.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
146.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
146.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
145.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
145.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
144.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
144.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
144.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
143.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
143.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
143.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
143.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
143.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
143.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
142.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
141.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
140.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
140.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
139.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
138.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
138.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
138.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
138.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
137.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
136.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
136.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
135.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
135.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
135.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
134.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
134.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
134.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
134.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
134.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
134.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
133.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
133.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
132.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
132.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
132.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
131.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
131.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
131.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
131.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
131.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
130.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
129.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
129.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
129.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
129.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
129.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
128.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
128.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
127.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
127.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
126.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
126.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
126.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
125.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
125.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
124.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
124.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
123.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
122.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
121.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
121.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
121.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
121.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
121.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
120.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
120.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
119.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
119.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
118.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
118.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
117.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
116.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
116.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
116.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
116.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
115.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
115.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
115.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
114.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
114.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
114.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
113.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
113.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
113.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
112.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
112.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
112.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
111.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
110.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
110.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
110.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
110.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
110.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
109.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
109.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
109.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
108.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
108.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
108.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
107.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
106.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
106.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
106.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
105.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
105.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
104.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
103.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
103.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
103.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
103.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
102.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
102.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
101.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
100.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
99.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
98.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
98.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
97.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
97.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
97.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
96.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
95.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
95.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
94.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
92.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
92.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
91.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
90.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
89.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
89.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
89.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
88.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
88.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
88.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
88.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
87.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
87.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
85.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
82.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
82.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
81.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
80.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
78.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
77.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
76.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
76.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
74.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
74.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
73.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
73.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
72.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
72.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
70.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
70.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
70.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
68.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
67.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
65.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
63.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
63.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
61.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
59.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
54.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
50.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
50.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
49.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
49.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
48.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
48.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
44.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
42.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
39.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
33.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
31.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
30.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
30.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
27.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
26.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
26.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
24.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
17.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
141.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
495.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
379.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
312.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
296.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
284.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
271.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
257.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
252.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
239.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
227.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
226.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
225.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
220.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
216.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
216.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
213.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
213.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
213.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
207.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
203.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
202.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
200.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
200.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
191.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
189.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
184.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
183.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
179.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
174.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
170.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
168.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
162.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
162.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
159.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
155.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
155.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
155.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
148.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
146.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
143.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
141.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
140.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
135.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
135.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
134.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
133.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
133.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
132.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
132.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
128.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
120.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
119.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
118.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
118.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
116.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
114.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
112.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
109.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
108.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
107.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
104.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
103.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
101.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
101.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
99.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
99.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
98.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
98.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
97.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
96.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
96.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
95.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
94.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
94.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
92.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
92.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
92.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
91.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
91.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
87.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
87.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
84.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
84.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
80.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
76.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
74.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
74.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
61.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
61.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
58.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
46.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
42.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
41.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
38.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
36.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
34.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
32.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
S100A4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
131.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
1393.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
661.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
644.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
564.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
508.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
446.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
412.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
393.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
390.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
383.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
370.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
369.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
366.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
355.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
355.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
353.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
342.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
338.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
326.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
319.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
309.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
304.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
304.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
303.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
298.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
293.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
291.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
284.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
278.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
262.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
254.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
252.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
248.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
245.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
239.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
235.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
234.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
234.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
233.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
231.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
226.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
226.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
222.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
221.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
219.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
219.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
218.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
216.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
212.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
212.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
208.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
208.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
208.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
203.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
200.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
197.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
196.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
194.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
191.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
191.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
186.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
183.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
181.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
178.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
177.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
176.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
174.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
174.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
174.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
172.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
170.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
168.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
167.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
166.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
164.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
162.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
158.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
154.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
153.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
153.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
153.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
152.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
152.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
149.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
148.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
146.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
146.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
145.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
144.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
143.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
141.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
140.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
139.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
137.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
134.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
134.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
133.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
129.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
128.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
128.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
128.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
126.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
126.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
125.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
125.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
124.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
124.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
123.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
123.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
121.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
119.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
118.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
116.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
113.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
112.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
111.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
110.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
110.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
108.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
108.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
106.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
105.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
105.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
105.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
105.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
104.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
103.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
102.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
101.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
99.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
98.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
98.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
98.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
97.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
97.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
96.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
96.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
96.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
95.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
95.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
94.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
94.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
94.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
93.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
93.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
93.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
90.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
89.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
89.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
89.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
88.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
88.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
88.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
87.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
87.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
86.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
85.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
85.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
84.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
84.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
84.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
83.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
83.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
83.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
82.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
81.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
81.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
81.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
81.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
80.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
79.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
79.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
78.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
76.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
75.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
75.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
75.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
75.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
74.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
74.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
73.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
73.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
71.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
71.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
71.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
70.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
68.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
67.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
67.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
66.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
66.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
65.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
65.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
63.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
62.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
62.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
61.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
61.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
60.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
60.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
60.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
59.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
58.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
58.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
57.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
57.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
57.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
57.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
55.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
54.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
54.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
53.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
52.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
52.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
51.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
50.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
49.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
48.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
48.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
48.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
48.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
48.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
47.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
46.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
46.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
46.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
45.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
45.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
44.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
44.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
41.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
41.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
41.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
40.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
39.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
38.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
37.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
37.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
37.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
36.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
36.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
35.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
34.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
34.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
34.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
34.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
34.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
34.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
34.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
33.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
31.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
31.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
31.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
31.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
30.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
30.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
30.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
29.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
28.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
28.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
27.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
27.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
27.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
27.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
26.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
26.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
25.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
25.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
25.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
25.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
24.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
23.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
23.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
22.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
22.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
19.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
17.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
14.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
9.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
7.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
6.8
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079510001
Normal
1.8
CPT0078510003
Tumor
1.5
CPT0001260009
Tumor
1.4
CPT0088550004
Tumor
1.4
CPT0017850003
Tumor
1.3
CPT0000640003
Tumor
1.2
CPT0015910003
Tumor
1.2
CPT0081990003
Tumor
1.2
CPT0025290003
Tumor
1.1
CPT0025050003
Tumor
1.0
CPT0066480003
Tumor
1.0
CPT0081880003
Tumor
1.0
CPT0017410003
Tumor
0.9
CPT0076330003
Tumor
0.9
CPT0092730003
Tumor
0.8
CPT0078800003
Tumor
0.8
CPT0092290003
Tumor
0.7
CPT0079410003
Tumor
0.7
CPT0078990003
Tumor
0.7
CPT0088630003
Tumor
0.6
CPT0081600003
Tumor
0.6
CPT0002350011
Tumor
0.6
CPT0012640003
Normal
0.6
CPT0088760003
Tumor
0.6
CPT0079300001
Normal
0.6
CPT0023690003
Tumor
0.6
CPT0069190001
Normal
0.6
CPT0077320001
Normal
0.6
CPT0077310003
Tumor
0.6
CPT0075560003
Tumor
0.6
CPT0011240003
Tumor
0.6
CPT0021240003
Tumor
0.6
CPT0064370003
Tumor
0.6
CPT0010110003
Tumor
0.6
CPT0079230003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0012920003
Normal
0.5
CPT0066470004
Tumor
0.5
CPT0009020003
Normal
0.5
CPT0079380003
Tumor
0.5
CPT0012670003
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0025170003
Tumor
0.5
CPT0092190003
Normal
0.5
CPT0019990003
Tumor
0.5
CPT0065690003
Tumor
0.5
CPT0075170001
Normal
0.5
CPT0006900003
Tumor
0.5
CPT0001540009
Tumor
0.4
CPT0001550001
Normal
0.4
CPT0007860003
Tumor
0.4
CPT0002370001
Normal
0.4
CPT0063320003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0024670003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0063330001
Normal
0.3
CPT0089460004
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0023350003
Tumor
0.3
CPT0065430003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0001510001
Normal
0.2
CPT0012900004
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0007870001
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0084590001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0066520001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0001180009
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0001270001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0079270003
Tumor
-0.1
CPT0007320003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0065870003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0001500009
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0086970003
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0012290003
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0020120003
Tumor
-0.3
CPT0078940001
Normal
-0.3
CPT0079180003
Tumor
-0.3
CPT0013790003
Normal
-0.3
CPT0025580004
Tumor
-0.3
CPT0065820001
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0006630003
Tumor
-0.3
CPT0077500001
Normal
-0.4
CPT0088690003
Tumor
-0.4
CPT0011410003
Tumor
-0.4
CPT0078830003
Tumor
-0.4
CPT0088710001
Normal
-0.4
CPT0001190001
Normal
-0.4
CPT0009080003
Normal
-0.4
CPT0025060001
Normal
-0.4
CPT0025350003
Tumor
-0.4
CPT0081620001
Normal
-0.4
CPT0015810003
Tumor
-0.4
CPT0079000001
Normal
-0.4
CPT0089040001
Normal
-0.4
CPT0069160003
Tumor
-0.4
CPT0006530001
Normal
-0.4
CPT0088970003
Tumor
-0.4
CPT0000890001
Normal
-0.5
CPT0012570003
Normal
-0.5
CPT0020020001
Normal
-0.5
CPT0086950003
Tumor
-0.5
CPT0086830003
Normal
-0.5
CPT0025110003
Tumor
-0.5
CPT0002270011
Tumor
-0.5
CPT0020130001
Normal
-0.5
CPT0007470001
Normal
-0.5
CPT0078660003
Tumor
-0.5
CPT0078670001
Normal
-0.6
CPT0006440003
Tumor
-0.6
CPT0010160003
Tumor
-0.6
CPT0077140001
Normal
-0.6
CPT0088920001
Normal
-0.7
CPT0012090003
Normal
-0.7
CPT0088780001
Normal
-0.7
CPT0023360001
Normal
-0.7
CPT0000790001
Normal
-0.7
CPT0066430001
Normal
-0.7
CPT0089480003
Normal
-0.7
CPT0092310003
Normal
-0.7
CPT0092800003
Normal
-0.8
CPT0023710001
Normal
-0.8
CPT0079430001
Normal
-0.8
CPT0025610001
Normal
-0.8
CPT0025880003
Tumor
-0.8
CPT0010170001
Normal
-0.8
CPT0087050003
Normal
-0.8
CPT0063640001
Normal
-0.9
CPT0014350001
Normal
-0.9
CPT0086370003
Normal
-0.9
CPT0026420001
Normal
-0.9
CPT0065450001
Normal
-0.9
CPT0092740003
Normal
-0.9
CPT0078840001
Normal
-1.0
CPT0025920001
Normal
-1.0
CPT0006950001
Normal
-1.0
CPT0006730001
Normal
-1.0
CPT0014130001
Normal
-1.0
CPT0012770003
Normal
-1.1
CPT0001350001
Normal
-1.2
CPT0001340003
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
