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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
789.5
nTPM
FANTOM5:
1433.2
Scaled Tags Per Million
Pig:
1282.4
nTPM
Allen mouse:
14.7
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
789.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 689.2
2301
Female, age 85, both hemispheres
931.8
2188
Female, age 91, both hemispheres
789.2
2090
Male, age 80, both hemispheres
674.9
1984
Male, age 76, both hemispheres
360.9
Dorsal cochlear nucleus nTPM: 588.4
2378
Male, age 80, both hemispheres
746.5
2187
Female, age 91, both hemispheres
727.2
2370
Male, age 61, both hemispheres
531.1
2802
Male, age 74, right hemisphere
480.0
2058
Male, age 76, both hemispheres
456.8
Dorsal tegmental nucleus nTPM: 529.0
2083
Male, age 80, both hemispheres
649.9
2326
Male, age 74, both hemispheres
596.3
1936
Male, age 76, left hemisphere
448.9
2358
Male, age 61, both hemispheres
420.9
Dorsolateral tegmental area nTPM: 545.4
2751
Female, age 85, both hemispheres
811.3
2654
Male, age 80, both hemispheres
614.9
2337
Male, age 61, both hemispheres
511.0
2360
Male, age 74, both hemispheres
438.8
2141
Male, age 76, both hemispheres
351.2
Kolliker-Fuse nucleus nTPM: 689.6
2793
Female, age 91, left hemisphere
972.5
2315
Male, age 76, right hemisphere
574.8
2163
Male, age 80, both hemispheres
521.5
Lateral lemniscal nuclei nTPM: 566.0
2320
Female, age 91, left hemisphere
744.4
2036
Male, age 80, both hemispheres
567.1
2746
Female, age 85, left hemisphere
540.3
2169
Male, age 76, both hemispheres
521.0
2453
Male, age 74, right hemisphere
457.2
Lateral parabrachial nucleus nTPM: 640.0
2792
Male, age 76, both hemispheres
1102.4
2013
Male, age 80, both hemispheres
569.5
2139
Female, age 85, right hemisphere
480.6
2790
Male, age 61, both hemispheres
407.6
Lateral vestibular nucleus nTPM: 573.3
2311
Male, age 80, both hemispheres
646.6
2184
Male, age 76, both hemispheres
500.0
Locus coeruleus nTPM: 331.9
2720
Male, age 74, both hemispheres
473.6
2162
Male, age 80, both hemispheres
431.2
2788
Male, age 74, unknown
325.0
2317
Female, age 72, unknown
313.0
2123
Female, age 91, both hemispheres
274.9
2014
Male, age 55, unknown
264.4
1980
Male, age 76, both hemispheres
241.4
Medial parabrachial nucleus nTPM: 644.9
2170
Female, age 91, both hemispheres
835.9
2854
Male, age 80, both hemispheres
731.9
2463
Female, age 85, right hemisphere
607.8
2786
Male, age 76, both hemispheres
568.9
2156
Male, age 61, both hemispheres
480.2
Medial periolivary nuclei nTPM: 517.3
2791
Male, age 74, right hemisphere
686.5
2458
Female, age 91, both hemispheres
647.4
2081
Male, age 80, both hemispheres
511.1
2063
Male, age 76, both hemispheres
398.6
2171
Female, age 85, both hemispheres
343.2
Motor facial nucleus nTPM: 615.2
2697
Female, age 85, both hemispheres
855.7
2365
Male, age 74, right hemisphere
812.0
2126
Male, age 61, both hemispheres
699.3
2795
Female, age 91, both hemispheres
550.4
2327
Male, age 80, both hemispheres
433.4
2062
Male, age 76, both hemispheres
340.2
Motor trigeminal nucleus nTPM: 561.2
2321
Female, age 91, both hemispheres
675.7
2560
Male, age 74, both hemispheres
664.8
2335
Male, age 61, both hemispheres
538.7
2309
Male, age 76, both hemispheres
505.5
2079
Male, age 80, both hemispheres
421.4
Nuclei of the trapezoid body nTPM: 460.5
2166
Male, age 80, both hemispheres
549.6
2368
Female, age 91, both hemispheres
547.3
2159
Male, age 61, both hemispheres
509.3
1983
Male, age 76, both hemispheres
420.8
2735
Female, age 85, both hemispheres
275.2
Nucleus raphe magnus nTPM: 487.5
2459
Female, age 91, both hemispheres
654.7
2455
Male, age 74, both hemispheres
575.2
2051
Male, age 76, both hemispheres
557.5
2328
Male, age 80, both hemispheres
547.6
2160
Male, age 61, both hemispheres
318.7
2172
Female, age 85, both hemispheres
271.5
Paramedian reticular nucleus nTPM: 568.3
2052
Male, age 76, both hemispheres
698.7
2050
Female, age 85, both hemispheres
536.5
2313
Male, age 61, both hemispheres
525.0
2057
Male, age 80, both hemispheres
512.9
Pedunculopontine tegmental nucleus nTPM: 550.1
2334
Male, age 80, both hemispheres
580.5
2338
Male, age 61, both hemispheres
565.2
1921
Female, age 85, both hemispheres
504.5
Pontine nuclei nTPM: 601.4
2454
Male, age 74, left hemisphere
1042.4
2319
Female, age 91, both hemispheres
840.0
2109
Female, age 72, unknown
662.3
1863
Male, age 55, unknown
533.9
1968
Male, age 76, left hemisphere
524.7
2115
Male, age 80, left hemisphere
490.8
2727
Male, age 61, right hemisphere
361.5
2787
Female, age 85, both hemispheres
355.6
Pontine raphe nucleus nTPM: 418.0
2853
Male, age 76, midline
449.1
2122
Female, age 85, midline
386.9
Posteroventral cochlear nucleus nTPM: 689.1
2341
Male, age 80, both hemispheres
853.5
2135
Female, age 91, both hemispheres
831.0
2371
Male, age 61, both hemispheres
759.0
2070
Male, age 76, both hemispheres
547.9
2752
Female, age 85, both hemispheres
454.2
Principal sensory trigeminal nucleus nTPM: 526.0
2367
Female, age 91, left hemisphere
838.1
2324
Male, age 76, both hemispheres
518.1
2158
Male, age 61, both hemispheres
395.7
2008
Male, age 80, left hemisphere
352.3
Reticular pontine nucleus, caudal nTPM: 600.2
2559
Male, age 74, both hemispheres
746.2
2457
Female, age 91, both hemispheres
725.6
2092
Male, age 76, both hemispheres
529.5
2332
Male, age 80, right hemisphere
399.6
Reticular pontine nucleus, oral nTPM: 789.5
2361
Male, age 74, both hemispheres
1024.4
2366
Female, age 91, both hemispheres
911.8
2167
Male, age 76, both hemispheres
751.3
1939
Male, age 80, both hemispheres
669.9
2012
Female, age 85, both hemispheres
589.8
Reticulotegmental nucleus nTPM: 499.1
2322
Female, age 91, both hemispheres
643.0
2333
Male, age 80, both hemispheres
530.1
2452
Male, age 74, both hemispheres
490.4
2325
Male, age 76, both hemispheres
332.8
Spinal trigeminal nucleus, oral nTPM: 489.4
2164
Male, age 80, both hemispheres
549.8
1978
Male, age 76, both hemispheres
523.7
2737
Female, age 85, both hemispheres
394.6
Subcoeruleus area nTPM: 559.4
2369
Female, age 85, left hemisphere
945.7
1958
Male, age 80, both hemispheres
529.3
2089
Male, age 76, left hemisphere
474.2
2451
Male, age 74, both hemispheres
429.2
2323
Female, age 91, left hemisphere
418.8
Superior olive nTPM: 620.7
2364
Male, age 74, right hemisphere
808.5
2020
Male, age 76, both hemispheres
654.9
2561
Female, age 91, both hemispheres
630.3
2329
Male, age 80, right hemisphere
544.3
1875
Female, age 85, both hemispheres
465.4
Ventral periolivary nuclei nTPM: 521.8
2023
Male, age 76, both hemispheres
700.5
2794
Female, age 91, left hemisphere
489.2
2165
Male, age 80, both hemispheres
470.3
2130
Female, age 85, both hemispheres
427.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 645.0
2840
Female, age 85, both hemispheres
802.4
2359
Male, age 61, both hemispheres
683.6
2456
Female, age 91, both hemispheres
673.5
2449
Male, age 74, both hemispheres
602.3
1959
Male, age 76, both hemispheres
583.2
2161
Male, age 80, both hemispheres
524.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1282.4
Pig sample
Sample description
nTPM
Pons nTPM: 1282.4
Samples: 4
Max nTPM: 2509.6
Min nTPM: 686.6
Sample A
Female
686.6
Sample B
Female
694.8
Sample C
Male
1238.5
Sample D
Male
2509.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.