HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:38.5 nTPM
HPA Brain:54.2 nTPM
GTEx:38.5 nTPM
FANTOM5:17.0 Scaled Tags Per Million
Pig:22.6 nTPM
Mouse:37.2 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020259
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 54.2
Sample id Sample description nTPM
Hippocampus
nTPM: 52.1
2529 Female, age 94, left hemisphere 58.8
2148 Female, age 91, left hemisphere 54.0
1898 Male, age 80, left hemisphere 53.8
2621 Female, age 67, right hemisphere 53.4
1911 Female, age 85, right hemisphere 47.6
1855 Male, age 76, left hemisphere 44.8
Dentate gyrus
nTPM: 49.3
2531 Female, age 67, both hemispheres 55.6
2530 Female, age 94, left hemisphere 55.2
1927 Female, age 91, both hemispheres 50.2
2528 Male, age 74, both hemispheres 49.8
2010 Male, age 76, both hemispheres 45.1
2246 Female, age 85, both hemispheres 40.0
Entorhinal gyrus
nTPM: 54.2
2613 Female, age 94, left hemisphere 57.5
2764 Male, age 80, right hemisphere 57.0
2686 Male, age 75, right hemisphere 55.9
2117 Female, age 91, right hemisphere 51.9
1787 Male, age 76, left hemisphere 51.8
1938 Female, age 85, left hemisphere 51.0
Hippocampus, CA1
nTPM: 49.1
2749 Male, age 80, left hemisphere 60.1
2082 Female, age 91, right hemisphere 50.8
2527 Male, age 74, both hemispheres 46.5
1873 Female, age 85, both hemispheres 44.3
2045 Male, age 76, both hemispheres 43.6
Hippocampus, CA2
nTPM: 49.8
1963 Male, age 80, left hemisphere 66.2
2113 Female, age 91, right hemisphere 50.9
2437 Female, age 94, left hemisphere 49.5
1892 Male, age 76, both hemispheres 46.8
1940 Female, age 85, left hemisphere 43.9
2249 Male, age 74, both hemispheres 41.6
Hippocampus, CA3
nTPM: 51.9
2861 Female, age 67, both hemispheres 61.9
2137 Male, age 80, left hemisphere 59.4
2620 Female, age 94, left hemisphere 55.8
1867 Male, age 76, both hemispheres 48.1
1891 Female, age 85, both hemispheres 44.1
2436 Male, age 74, both hemispheres 42.2
Parahippocampal cortex
nTPM: 47.2
2622 Female, age 67, right hemisphere 53.1
2245 Female, age 91, both hemispheres 51.8
1933 Female, age 85, both hemispheres 47.5
2018 Male, age 76, both hemispheres 47.4
1990 Female, age 91, right hemisphere 47.2
2250 Female, age 67, right hemisphere 46.2
2692 Male, age 74, both hemispheres 45.7
1850 Male, age 80, both hemispheres 45.3
2532 Female, age 72, left hemisphere 44.8
2693 Female, age 94, both hemispheres 42.9
Perirhinal gyrus
nTPM: 48.7
1794 Male, age 80, right hemisphere 52.4
1847 Female, age 91, left hemisphere 52.2
1841 Female, age 85, right hemisphere 47.7
2521 Female, age 94, right hemisphere 46.3
2848 Male, age 76, right hemisphere 44.9
Subiculum
nTPM: 46.2
1977 Female, age 85, both hemispheres 50.6
2619 Male, age 74, both hemispheres 49.7
2729 Female, age 91, right hemisphere 48.6
1901 Male, age 80, both hemispheres 47.5
2042 Male, age 76, both hemispheres 43.1
2438 Female, age 94, left hemisphere 37.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 38.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.5
Samples: 197

Max nTPM: 91.0
Min nTPM: 10.9
Std nTPM: 11.0
Median nTPM: 37.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 91.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 72.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 67.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 66.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 66.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 61.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 60.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 60.1
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 56.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 56.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 55.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 17.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.0
FF:10153-102I9 76 years, female 25.8
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.6
Pig sample Sample description nTPM
Subiculum
nTPM: 21.2
Samples: 4

Max nTPM: 28.2
Min nTPM: 16.2
Sample A Female 28.2
Sample B Female 20.9
Sample C Male 19.6
Sample D Male 16.2
Dorsal hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 21.5
Min nTPM: 13.2
Sample A Female 21.5
Sample B Female 19.4
Sample C Male 17.3
Sample D Male 13.2
Entorhinal cortex
nTPM: 22.6
Samples: 4

Max nTPM: 27.3
Min nTPM: 20.2
Sample A Female 21.0
Sample B Female 21.8
Sample C Male 27.3
Sample D Male 20.2
Ventral hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 27.1
Min nTPM: 17.3
Sample A Female 18.0
Sample B Female 17.3
Sample C Male 27.1
Sample D Male 20.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 37.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.2
Samples: 4

Max nTPM: 37.8
Min nTPM: 36.5
Sample A Male 36.5
Sample B Male 37.8
Sample C Female 37.6
Sample D Female 37.0
Hippocampal formation
nTPM: 36.2
Samples: 4

Max nTPM: 38.8
Min nTPM: 34.4
Sample A Male 36.6
Sample B Male 34.4
Sample C Female 38.8
Sample D Female 34.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
69095969 Antisense, RP_050324_02_F06, Mouse strain C57BL/6J (56 days, male) 2.0

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