HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:34.6 nTPM
HPA Brain:45.8 nTPM
GTEx:34.6 nTPM
FANTOM5:52.9 Scaled Tags Per Million
Pig:54.1 nTPM
Mouse:43.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 45.8
Sample id Sample description nTPM
Hippocampus
nTPM: 30.8
1911 Female, age 85, right hemisphere 37.3
1898 Male, age 80, left hemisphere 33.6
1855 Male, age 76, left hemisphere 32.3
2621 Female, age 67, right hemisphere 28.9
2148 Female, age 91, left hemisphere 27.4
2529 Female, age 94, left hemisphere 25.3
Dentate gyrus
nTPM: 30.7
2530 Female, age 94, left hemisphere 34.6
2010 Male, age 76, both hemispheres 34.0
1927 Female, age 91, both hemispheres 30.9
2528 Male, age 74, both hemispheres 30.0
2531 Female, age 67, both hemispheres 29.4
2246 Female, age 85, both hemispheres 25.0
Entorhinal gyrus
nTPM: 45.8
1938 Female, age 85, left hemisphere 55.9
2764 Male, age 80, right hemisphere 53.2
2613 Female, age 94, left hemisphere 51.4
1787 Male, age 76, left hemisphere 43.9
2117 Female, age 91, right hemisphere 37.0
2686 Male, age 75, right hemisphere 33.7
Hippocampus, CA1
nTPM: 30.2
2749 Male, age 80, left hemisphere 39.3
2045 Male, age 76, both hemispheres 35.5
1873 Female, age 85, both hemispheres 31.7
2527 Male, age 74, both hemispheres 23.1
2082 Female, age 91, right hemisphere 21.7
Hippocampus, CA2
nTPM: 31.4
1892 Male, age 76, both hemispheres 38.0
1963 Male, age 80, left hemisphere 33.9
1940 Female, age 85, left hemisphere 32.7
2249 Male, age 74, both hemispheres 28.9
2113 Female, age 91, right hemisphere 27.6
2437 Female, age 94, left hemisphere 27.2
Hippocampus, CA3
nTPM: 31.2
2137 Male, age 80, left hemisphere 43.0
1891 Female, age 85, both hemispheres 41.6
1867 Male, age 76, both hemispheres 39.1
2620 Female, age 94, left hemisphere 24.9
2436 Male, age 74, both hemispheres 20.3
2861 Female, age 67, both hemispheres 18.4
Parahippocampal cortex
nTPM: 35.8
1850 Male, age 80, both hemispheres 50.4
1933 Female, age 85, both hemispheres 48.7
2532 Female, age 72, left hemisphere 41.1
1990 Female, age 91, right hemisphere 39.5
2693 Female, age 94, both hemispheres 37.4
2018 Male, age 76, both hemispheres 34.9
2245 Female, age 91, both hemispheres 33.8
2692 Male, age 74, both hemispheres 31.1
2622 Female, age 67, right hemisphere 20.6
2250 Female, age 67, right hemisphere 20.5
Perirhinal gyrus
nTPM: 42.2
2848 Male, age 76, right hemisphere 51.7
1847 Female, age 91, left hemisphere 42.3
1794 Male, age 80, right hemisphere 39.6
1841 Female, age 85, right hemisphere 39.0
2521 Female, age 94, right hemisphere 38.5
Subiculum
nTPM: 36.9
1977 Female, age 85, both hemispheres 48.2
2042 Male, age 76, both hemispheres 46.1
1901 Male, age 80, both hemispheres 44.7
2438 Female, age 94, left hemisphere 28.0
2619 Male, age 74, both hemispheres 27.8
2729 Female, age 91, right hemisphere 26.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 34.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.6
Samples: 197

Max nTPM: 93.9
Min nTPM: 1.9
Std nTPM: 15.0
Median nTPM: 31.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 93.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 91.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 81.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 77.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 76.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 70.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 68.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 65.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 65.2
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 64.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 64.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 52.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.9
FF:10153-102I9 76 years, female 62.3
FF:10169-103B7 60 years, female 43.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 54.1
Pig sample Sample description nTPM
Subiculum
nTPM: 47.9
Samples: 4

Max nTPM: 54.4
Min nTPM: 33.8
Sample A Female 54.4
Sample B Female 54.3
Sample C Male 33.8
Sample D Male 49.1
Dorsal hippocampus
nTPM: 45.8
Samples: 4

Max nTPM: 51.3
Min nTPM: 36.4
Sample A Female 51.3
Sample B Female 44.2
Sample C Male 51.2
Sample D Male 36.4
Entorhinal cortex
nTPM: 54.1
Samples: 4

Max nTPM: 57.1
Min nTPM: 47.5
Sample A Female 55.4
Sample B Female 56.4
Sample C Male 57.1
Sample D Male 47.5
Ventral hippocampus
nTPM: 33.6
Samples: 4

Max nTPM: 37.6
Min nTPM: 26.5
Sample A Female 33.8
Sample B Female 36.4
Sample C Male 26.5
Sample D Male 37.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 43.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.3
Samples: 4

Max nTPM: 51.7
Min nTPM: 40.2
Sample A Male 40.2
Sample B Male 41.0
Sample C Female 40.3
Sample D Female 51.7
Hippocampal formation
nTPM: 42.4
Samples: 4

Max nTPM: 47.8
Min nTPM: 36.4
Sample A Male 47.8
Sample B Male 44.8
Sample C Female 40.4
Sample D Female 36.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
73513326 Antisense, RP_051121_01_H05, Mouse strain C57BL/6J (56 days, male) 0.1

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