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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
554.4
nTPM
FANTOM5:
0.0
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
554.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 397.9
2301
Female, age 85, both hemispheres
492.9
2090
Male, age 80, both hemispheres
418.8
2188
Female, age 91, both hemispheres
413.8
1984
Male, age 76, both hemispheres
266.1
Dorsal cochlear nucleus nTPM: 325.6
2378
Male, age 80, both hemispheres
449.2
2802
Male, age 74, right hemisphere
346.2
2187
Female, age 91, both hemispheres
339.2
2058
Male, age 76, both hemispheres
260.0
2370
Male, age 61, both hemispheres
233.2
Dorsal tegmental nucleus nTPM: 417.8
2326
Male, age 74, both hemispheres
706.0
2358
Male, age 61, both hemispheres
365.3
1936
Male, age 76, left hemisphere
317.0
2083
Male, age 80, both hemispheres
282.8
Dorsolateral tegmental area nTPM: 253.6
2751
Female, age 85, both hemispheres
406.2
2654
Male, age 80, both hemispheres
238.0
2360
Male, age 74, both hemispheres
232.0
2337
Male, age 61, both hemispheres
203.6
2141
Male, age 76, both hemispheres
188.3
Kolliker-Fuse nucleus nTPM: 263.5
2315
Male, age 76, right hemisphere
381.6
2163
Male, age 80, both hemispheres
247.4
2793
Female, age 91, left hemisphere
161.4
Lateral lemniscal nuclei nTPM: 206.2
2453
Male, age 74, right hemisphere
272.3
2169
Male, age 76, both hemispheres
236.2
2746
Female, age 85, left hemisphere
191.8
2320
Female, age 91, left hemisphere
173.0
2036
Male, age 80, both hemispheres
157.8
Lateral parabrachial nucleus nTPM: 296.1
2792
Male, age 76, both hemispheres
504.8
2139
Female, age 85, right hemisphere
307.4
2013
Male, age 80, both hemispheres
250.4
2790
Male, age 61, both hemispheres
121.8
Lateral vestibular nucleus nTPM: 344.8
2184
Male, age 76, both hemispheres
385.2
2311
Male, age 80, both hemispheres
304.3
Locus coeruleus nTPM: 261.5
2720
Male, age 74, both hemispheres
642.0
2317
Female, age 72, unknown
293.9
2014
Male, age 55, unknown
253.3
2788
Male, age 74, unknown
228.6
2162
Male, age 80, both hemispheres
196.9
1980
Male, age 76, both hemispheres
125.8
2123
Female, age 91, both hemispheres
90.0
Medial parabrachial nucleus nTPM: 286.3
2786
Male, age 76, both hemispheres
392.0
2463
Female, age 85, right hemisphere
349.6
2170
Female, age 91, both hemispheres
284.6
2854
Male, age 80, both hemispheres
260.5
2156
Male, age 61, both hemispheres
144.6
Medial periolivary nuclei nTPM: 269.8
2458
Female, age 91, both hemispheres
602.6
2063
Male, age 76, both hemispheres
227.1
2081
Male, age 80, both hemispheres
197.8
2791
Male, age 74, right hemisphere
165.4
2171
Female, age 85, both hemispheres
156.3
Motor facial nucleus nTPM: 348.5
2795
Female, age 91, both hemispheres
540.9
2697
Female, age 85, both hemispheres
474.4
2327
Male, age 80, both hemispheres
362.8
2126
Male, age 61, both hemispheres
268.1
2062
Male, age 76, both hemispheres
254.8
2365
Male, age 74, right hemisphere
190.2
Motor trigeminal nucleus nTPM: 309.9
2321
Female, age 91, both hemispheres
449.4
2309
Male, age 76, both hemispheres
386.1
2560
Male, age 74, both hemispheres
293.3
2079
Male, age 80, both hemispheres
259.4
2335
Male, age 61, both hemispheres
161.5
Nuclei of the trapezoid body nTPM: 212.8
1983
Male, age 76, both hemispheres
324.9
2166
Male, age 80, both hemispheres
306.5
2368
Female, age 91, both hemispheres
221.3
2159
Male, age 61, both hemispheres
122.7
2735
Female, age 85, both hemispheres
88.7
Nucleus raphe magnus nTPM: 305.6
2459
Female, age 91, both hemispheres
740.1
2328
Male, age 80, both hemispheres
395.7
2455
Male, age 74, both hemispheres
249.1
2172
Female, age 85, both hemispheres
187.5
2160
Male, age 61, both hemispheres
144.2
2051
Male, age 76, both hemispheres
117.1
Paramedian reticular nucleus nTPM: 355.6
2050
Female, age 85, both hemispheres
754.6
2313
Male, age 61, both hemispheres
280.3
2057
Male, age 80, both hemispheres
208.9
2052
Male, age 76, both hemispheres
178.5
Pedunculopontine tegmental nucleus nTPM: 243.6
2334
Male, age 80, both hemispheres
420.6
1921
Female, age 85, both hemispheres
160.4
2338
Male, age 61, both hemispheres
149.9
Pontine nuclei nTPM: 229.5
2319
Female, age 91, both hemispheres
330.7
1968
Male, age 76, left hemisphere
308.7
1863
Male, age 55, unknown
238.6
2109
Female, age 72, unknown
228.5
2787
Female, age 85, both hemispheres
226.4
2454
Male, age 74, left hemisphere
220.2
2115
Male, age 80, left hemisphere
183.6
2727
Male, age 61, right hemisphere
99.5
Pontine raphe nucleus nTPM: 295.2
2122
Female, age 85, midline
384.5
2853
Male, age 76, midline
205.9
Posteroventral cochlear nucleus nTPM: 364.6
2752
Female, age 85, both hemispheres
682.6
2135
Female, age 91, both hemispheres
390.1
2341
Male, age 80, both hemispheres
295.9
2070
Male, age 76, both hemispheres
242.5
2371
Male, age 61, both hemispheres
211.8
Principal sensory trigeminal nucleus nTPM: 235.3
2324
Male, age 76, both hemispheres
457.1
2367
Female, age 91, left hemisphere
187.1
2158
Male, age 61, both hemispheres
166.4
2008
Male, age 80, left hemisphere
130.7
Reticular pontine nucleus, caudal nTPM: 440.1
2457
Female, age 91, both hemispheres
607.0
2559
Male, age 74, both hemispheres
603.4
2092
Male, age 76, both hemispheres
364.6
2332
Male, age 80, right hemisphere
185.4
Reticular pontine nucleus, oral nTPM: 287.1
2366
Female, age 91, both hemispheres
476.9
2012
Female, age 85, both hemispheres
340.2
2167
Male, age 76, both hemispheres
264.0
1939
Male, age 80, both hemispheres
210.1
2361
Male, age 74, both hemispheres
144.3
Reticulotegmental nucleus nTPM: 390.3
2452
Male, age 74, both hemispheres
564.8
2325
Male, age 76, both hemispheres
399.1
2322
Female, age 91, both hemispheres
311.2
2333
Male, age 80, both hemispheres
286.0
Spinal trigeminal nucleus, oral nTPM: 554.4
1978
Male, age 76, both hemispheres
819.0
2164
Male, age 80, both hemispheres
537.1
2737
Female, age 85, both hemispheres
307.2
Subcoeruleus area nTPM: 335.5
2451
Male, age 74, both hemispheres
487.7
2369
Female, age 85, left hemisphere
381.9
2089
Male, age 76, left hemisphere
342.4
1958
Male, age 80, both hemispheres
259.4
2323
Female, age 91, left hemisphere
205.9
Superior olive nTPM: 310.0
2329
Male, age 80, right hemisphere
456.9
2020
Male, age 76, both hemispheres
428.8
2561
Female, age 91, both hemispheres
298.9
2364
Male, age 74, right hemisphere
259.6
1875
Female, age 85, both hemispheres
105.8
Ventral periolivary nuclei nTPM: 270.2
2794
Female, age 91, left hemisphere
487.3
2023
Male, age 76, both hemispheres
249.7
2165
Male, age 80, both hemispheres
231.0
2130
Female, age 85, both hemispheres
112.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 441.5
2161
Male, age 80, both hemispheres
916.3
2359
Male, age 61, both hemispheres
488.5
2456
Female, age 91, both hemispheres
472.6
1959
Male, age 76, both hemispheres
312.4
2449
Male, age 74, both hemispheres
236.5
2840
Female, age 85, both hemispheres
222.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.