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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
344.1
Sample id
Sample description
nTPM
Amygdala nTPM: 344.1
2695
Female, age 67, right hemisphere
752.0
1987
Female, age 91, left hemisphere
344.9
2514
Male, age 75, right hemisphere
264.7
2517
Female, age 94, left hemisphere
210.3
2814
Male, age 76, right hemisphere
148.8
Basal amygdala nTPM: 255.1
2827
Female, age 67, right hemisphere
464.8
2609
Male, age 75, right hemisphere
410.0
2110
Male, age 80, left hemisphere
291.0
1955
Male, age 76, both hemispheres
162.5
2243
Female, age 91, right hemisphere
114.4
2685
Female, age 94, left hemisphere
88.2
Central amygdala nTPM: 208.5
2826
Female, age 94, left hemisphere
268.2
2515
Male, age 75, right hemisphere
260.1
2239
Male, age 80, left hemisphere
222.4
1905
Male, age 76, both hemispheres
159.7
2701
Female, age 91, right hemisphere
132.0
Corticomedial amygdala nTPM: 167.1
2535
Female, age 67, right hemisphere
252.0
2428
Male, age 75, right hemisphere
186.4
2429
Female, age 94, left hemisphere
185.7
2829
Male, age 80, left hemisphere
160.1
2240
Male, age 76, both hemispheres
126.7
2242
Female, age 91, right hemisphere
92.0
Lateral amygdala nTPM: 334.5
2516
Male, age 75, right hemisphere
864.2
2830
Female, age 67, right hemisphere
409.8
2534
Female, age 94, left hemisphere
280.1
2256
Male, age 80, left hemisphere
182.1
1883
Male, age 76, both hemispheres
136.3
2255
Female, age 91, right hemisphere
134.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
945.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 945.2
Samples: 181
Max nTPM: 8427.5
Min nTPM: 42.5
Std nTPM: 1147.9
Median nTPM: 567.0
GTEX-1RLM8-0011-R4a-SM-F2TBL
50-59 years, male
8427.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
6445.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
4528.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
4450.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
4395.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
4074.6
GTEX-1LKK1-0011-R4b-SM-EY5YA
50-59 years, female
3886.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
3855.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
3771.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
3685.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
3423.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
3020.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
2686.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
2495.5
GTEX-145LU-0011-R4b-SM-5P9K1
50-59 years, male
2358.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
2354.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
2205.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
2127.6
GTEX-1117F-0011-R4b-SM-GI4VM
60-69 years, female
2109.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
2108.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
2023.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
1896.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
1731.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
1603.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
1602.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
1551.1
GTEX-147F4-0011-R4b-SM-GJ3R4
50-59 years, male
1494.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
1450.8
GTEX-1RQED-0011-R4b-SM-F2I2X
60-69 years, male
1438.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
1368.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
1314.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
1313.2
GTEX-11DYG-0011-R4b-SM-GJ3RG
60-69 years, male
1297.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
1271.2
GTEX-1JMLX-0011-R4a-SM-EY5YJ
50-59 years, male
1270.3
GTEX-1PWST-0011-R4a-SM-F2T9X
70-79 years, male
1270.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
1268.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
1249.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1224.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
1224.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
1222.1
GTEX-11ZTS-0011-R4b-SM-GINAQ
60-69 years, female
1213.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
1210.0
GTEX-13QJC-0011-R4a-SM-H65ZP
60-69 years, female
1209.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
1207.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
1188.5
GTEX-13FHO-0011-R4b-SM-H6611
60-69 years, male
1155.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
1149.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
1115.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
1096.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
1023.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
980.0
GTEX-13PLJ-0011-R4b-SM-GJ3R6
60-69 years, female
968.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
918.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
917.8
GTEX-1RQEC-0011-R4b-SM-F342C
60-69 years, male
912.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
894.1
GTEX-1JJ6O-0011-R4a-SM-EY5YM
60-69 years, male
875.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
867.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
865.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
861.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
852.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
818.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
765.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
756.4
GTEX-14C5O-0011-R4b-SM-G9ERF
60-69 years, male
752.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
749.4
GTEX-1JN1M-0011-R4b-SM-F6494
60-69 years, female
747.1
GTEX-1MJK2-0011-R4a-SM-F3426
50-59 years, male
747.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
738.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
727.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
717.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
716.6
GTEX-1LVA9-0011-R4a-SM-F2TA2
50-59 years, male
702.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
699.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
699.0
GTEX-11GS4-0011-R4a-SM-GJ3RJ
60-69 years, male
698.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
683.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
653.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
632.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
628.6
GTEX-11NV4-0011-R4a-SM-GI4XC
60-69 years, male
612.2
GTEX-ZYY3-0011-R4a-SM-GQ1CY
60-69 years, female
612.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
609.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
604.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
603.4
GTEX-1JMQK-0011-R4a-SM-G8LLQ
60-69 years, male
593.2
GTEX-1LB8K-0011-R4b-SM-F6487
50-59 years, male
581.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
581.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
574.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
567.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
561.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
561.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
537.5
GTEX-ZZPT-0011-R4a-SM-GPRX4
50-59 years, male
532.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
527.4
GTEX-11OF3-0011-R4a-SM-GJ3RB
60-69 years, male
525.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
519.3
GTEX-11GSO-0011-R4b-SM-GJ3R8
60-69 years, male
516.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
507.4
GTEX-1NV8Z-0011-R4b-SM-G8LMZ
60-69 years, male
506.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
505.1
GTEX-1R46S-0011-R4b-SM-F2TBF
60-69 years, female
491.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
467.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
451.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
450.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
447.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
440.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
440.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
437.8
GTEX-1PIIG-0011-R4a-SM-F2TAQ
30-39 years, male
437.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
424.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
424.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
419.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
418.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
413.9
GTEX-117XS-0011-R4b-SM-GJ3PR
60-69 years, male
411.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
406.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
405.4
GTEX-1P4AB-0011-R4b-SM-F2T9S
50-59 years, male
398.6
GTEX-1QP6S-0011-R4b-SM-F33ZY
40-49 years, male
382.4
GTEX-1LH75-0011-R4a-SM-F2TAM
50-59 years, female
376.3
GTEX-1O9I2-0011-R4b-SM-F3K4K
50-59 years, male
373.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
369.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
368.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
366.0
GTEX-12WSC-0011-R4a-SM-H6Q8M
50-59 years, male
349.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
347.5
GTEX-111FC-0011-R4a-SM-GIN8K
60-69 years, male
340.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
333.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
328.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
323.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
308.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
305.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
297.6
GTEX-1PPGY-0011-R4a-SM-F3K4F
60-69 years, male
294.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
284.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
283.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
282.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
279.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
278.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
266.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
258.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
254.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
248.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
247.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
245.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
242.9
GTEX-1KWVE-0011-R4a-SM-F3K5X
30-39 years, male
241.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
240.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
236.4
GTEX-PVOW-0011-R4A-SM-H6Q8O
40-49 years, male
234.1
GTEX-12ZZY-0011-R4a-SM-GIN9F
60-69 years, male
233.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
222.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
210.6
GTEX-1N2EF-0011-R4a-SM-F341F
60-69 years, male
203.9
GTEX-1JMOU-0011-R4b-SM-EY5ZL
60-69 years, female
201.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
197.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
192.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
186.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
177.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
170.8
GTEX-1RDX4-0011-R4b-SM-F3K43
50-59 years, female
162.0
GTEX-14BMV-0011-R4a-SM-H6Q7P
50-59 years, male
159.7
GTEX-1POEN-0011-R4b-SM-F3K4O
30-39 years, female
159.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
155.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
154.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
151.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
147.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
143.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
135.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
133.7
GTEX-15RJE-0011-R4a-SM-H7OH4
40-49 years, male
129.3
GTEX-11DXY-0011-R4b-SM-GI4VR
60-69 years, male
126.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
123.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
116.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
102.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
100.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
78.9
GTEX-1OJC4-0011-R4a-SM-F3K54
50-59 years, female
45.8
GTEX-1QMI2-0011-R4b-SM-F3K4R
60-69 years, male
42.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.