HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:28.6 nTPM
HPA Brain:27.7 nTPM
GTEx:28.6 nTPM
FANTOM5:18.5 Scaled Tags Per Million
Pig:20.3 nTPM
Mouse:18.5 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 27.7
Sample id Sample description nTPM
Hippocampus
nTPM: 26.4
1898 Male, age 80, left hemisphere 33.3
1855 Male, age 76, left hemisphere 27.5
2148 Female, age 91, left hemisphere 25.5
2621 Female, age 67, right hemisphere 24.2
1911 Female, age 85, right hemisphere 23.8
2529 Female, age 94, left hemisphere 23.8
Dentate gyrus
nTPM: 24.5
2010 Male, age 76, both hemispheres 27.0
1927 Female, age 91, both hemispheres 26.6
2530 Female, age 94, left hemisphere 25.9
2528 Male, age 74, both hemispheres 24.9
2531 Female, age 67, both hemispheres 21.6
2246 Female, age 85, both hemispheres 20.8
Entorhinal gyrus
nTPM: 27.0
2764 Male, age 80, right hemisphere 30.0
1787 Male, age 76, left hemisphere 28.5
1938 Female, age 85, left hemisphere 28.0
2117 Female, age 91, right hemisphere 27.1
2613 Female, age 94, left hemisphere 25.8
2686 Male, age 75, right hemisphere 22.9
Hippocampus, CA1
nTPM: 26.7
2749 Male, age 80, left hemisphere 39.2
1873 Female, age 85, both hemispheres 27.2
2527 Male, age 74, both hemispheres 23.0
2082 Female, age 91, right hemisphere 22.2
2045 Male, age 76, both hemispheres 22.1
Hippocampus, CA2
nTPM: 27.1
1963 Male, age 80, left hemisphere 34.3
1892 Male, age 76, both hemispheres 30.5
1940 Female, age 85, left hemisphere 25.6
2437 Female, age 94, left hemisphere 25.4
2113 Female, age 91, right hemisphere 23.6
2249 Male, age 74, both hemispheres 23.2
Hippocampus, CA3
nTPM: 27.7
2137 Male, age 80, left hemisphere 31.7
2620 Female, age 94, left hemisphere 27.4
2861 Female, age 67, both hemispheres 27.4
1867 Male, age 76, both hemispheres 27.0
2436 Male, age 74, both hemispheres 26.5
1891 Female, age 85, both hemispheres 25.9
Parahippocampal cortex
nTPM: 24.6
1850 Male, age 80, both hemispheres 28.4
1933 Female, age 85, both hemispheres 27.1
1990 Female, age 91, right hemisphere 26.0
2532 Female, age 72, left hemisphere 24.9
2018 Male, age 76, both hemispheres 24.4
2245 Female, age 91, both hemispheres 24.1
2692 Male, age 74, both hemispheres 23.6
2622 Female, age 67, right hemisphere 22.7
2250 Female, age 67, right hemisphere 22.6
2693 Female, age 94, both hemispheres 22.4
Perirhinal gyrus
nTPM: 27.1
1847 Female, age 91, left hemisphere 30.5
1794 Male, age 80, right hemisphere 29.6
1841 Female, age 85, right hemisphere 27.4
2848 Male, age 76, right hemisphere 24.5
2521 Female, age 94, right hemisphere 23.5
Subiculum
nTPM: 24.1
1901 Male, age 80, both hemispheres 28.6
1977 Female, age 85, both hemispheres 27.8
2619 Male, age 74, both hemispheres 24.7
2729 Female, age 91, right hemisphere 23.4
2042 Male, age 76, both hemispheres 22.5
2438 Female, age 94, left hemisphere 17.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 28.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.6
Samples: 197

Max nTPM: 55.6
Min nTPM: 14.9
Std nTPM: 6.4
Median nTPM: 28.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 55.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 47.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 47.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 46.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 46.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 45.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 44.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 43.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 40.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 39.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 39.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 18.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.5
FF:10169-103B7 60 years, female 18.6
FF:10153-102I9 76 years, female 18.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 20.3
Pig sample Sample description nTPM
Subiculum
nTPM: 17.4
Samples: 4

Max nTPM: 24.0
Min nTPM: 13.7
Sample A Female 24.0
Sample B Female 16.3
Sample C Male 15.7
Sample D Male 13.7
Dorsal hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 26.7
Min nTPM: 15.5
Sample A Female 26.7
Sample B Female 19.9
Sample C Male 19.2
Sample D Male 15.5
Entorhinal cortex
nTPM: 19.0
Samples: 4

Max nTPM: 20.7
Min nTPM: 15.3
Sample A Female 20.7
Sample B Female 19.5
Sample C Male 20.3
Sample D Male 15.3
Ventral hippocampus
nTPM: 18.8
Samples: 4

Max nTPM: 23.3
Min nTPM: 13.1
Sample A Female 19.9
Sample B Female 13.1
Sample C Male 23.3
Sample D Male 18.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 18.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.7
Samples: 4

Max nTPM: 17.9
Min nTPM: 12.6
Sample A Male 15.3
Sample B Male 17.9
Sample C Female 16.8
Sample D Female 12.6
Hippocampal formation
nTPM: 18.6
Samples: 4

Max nTPM: 20.7
Min nTPM: 16.3
Sample A Male 18.5
Sample B Male 18.7
Sample C Female 16.3
Sample D Female 20.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
67815941 Antisense, RP_040920_02_B05, Mouse strain C57BL/6J (56 days, male) 0.2

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