Expression of ISG15 in head and neck cancer

HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

ISG15 is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 147.16

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

672.2

Number of samples

492

Samples

Sample	Description	TPM
TCGA-UF-A7JS-01A	0 years, male, white, stage:Stage IVA, dead, 680 days	11901.9
TCGA-HD-7832-01A	0 years, male, white, stage:Stage IVA, alive, 836 days	5491.6
TCGA-CV-5977-01A	0 years, male, white, stage:Stage IVA, alive, 1840 days	5131.5
TCGA-CV-5966-01A	0 years, female, white, stage:Stage IVA, dead, 545 days	4894.8
TCGA-CV-A6JE-01A	0 years, male, white, stage:'--, alive, 1075 days	3995.1
TCGA-CV-A6K1-01A	0 years, male, white, stage:Stage IVA, alive, 685 days	3592.9
TCGA-F7-A61S-01A	0 years, male, white, stage:Stage III, alive, 576 days	3578.4
TCGA-CN-6011-01A	0 years, male, white, stage:Stage IVA, alive, 933 days	3405.4
TCGA-UF-A7JT-01A	0 years, female, white, stage:Stage IVA, dead, 993 days	3068.5
TCGA-T2-A6WZ-01A	0 years, male, white, stage:'--, dead, 484 days	3045.0
TCGA-CQ-5331-01A	0 years, female, white, stage:'--, alive, 1399 days	3014.9
TCGA-CQ-A4CD-01A	0 years, male, white, stage:Stage IVA, alive, 1022 days	2910.7
TCGA-CV-A6JN-01A	0 years, male, white, stage:'--, alive, 906 days	2910.4
TCGA-CV-A6JT-01A	0 years, male, white, stage:Stage II, alive, 852 days	2898.6
TCGA-CN-A499-01A	0 years, female, white, stage:Stage II, alive, 717 days	2859.8
TCGA-F7-A620-01A	0 years, male, white, stage:Stage III, alive, 543 days	2837.1
TCGA-BA-5152-01A	0 years, male, white, stage:Stage IVA, alive, 1288 days	2835.7
TCGA-D6-A6EM-01A	0 years, female, white, stage:Stage III, alive, 232 days	2796.6
TCGA-D6-A6EN-01A	0 years, male, white, stage:Stage III, alive, 687 days	2665.0
TCGA-CV-5444-01A	0 years, male, black or african american, stage:Stage IVA, alive, 2437 days	2607.6
TCGA-CV-7434-01A	0 years, male, white, stage:Stage IVA, dead, 218 days	2598.8
TCGA-CV-A6JU-01A	0 years, female, white, stage:Stage IVB, alive, 110 days	2417.4
TCGA-QK-A6IG-01A	0 years, male, white, stage:Stage III, dead, 222 days	2242.5
TCGA-IQ-A6SH-01A	0 years, male, black or african american, stage:Stage III, alive, 471 days	2177.8
TCGA-CV-A45R-01A	0 years, male, white, stage:Stage III, alive, 5480 days	2102.7
TCGA-CV-A468-01A	0 years, male, stage:Stage IVA, dead, 464 days	2093.1
TCGA-CV-6003-01A	0 years, female, white, stage:Stage III, alive, 1665 days	2081.8
TCGA-CV-7104-01A	0 years, female, white, stage:Stage IVA, dead, 393 days	2058.1
TCGA-CV-A464-01A	0 years, male, white, stage:Stage III, alive, 1722 days	2021.1
TCGA-CQ-6218-01A	0 years, female, white, stage:Stage IVA, alive, 1253 days	2001.9
TCGA-IQ-A61I-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2 days	1999.0
TCGA-CN-6996-01A	0 years, female, white, stage:Stage IVA, dead, 530 days	1942.3
TCGA-CV-A461-01A	0 years, male, white, stage:'--, dead, 2064 days	1942.0
TCGA-P3-A6T5-01A	0 years, female, white, stage:Stage IVA, dead, 882 days	1938.5
TCGA-T2-A6WX-01A	0 years, female, white, stage:'--, dead, 209 days	1928.2
TCGA-MT-A67F-01A	0 years, female, white, stage:Stage IVA, alive, 384 days	1903.6
TCGA-BA-A6DD-01A	0 years, male, black or african american, stage:Stage IVA, dead, 173 days	1898.6
TCGA-CV-6436-01A	0 years, male, white, stage:Stage IVA, alive, 1899 days	1898.5
TCGA-CV-A6JD-01A	0 years, female, white, stage:'--, dead, 182 days	1865.0
TCGA-CV-6952-01A	0 years, female, white, stage:Stage IVA, dead, 185 days	1841.3
TCGA-CV-7415-01A	0 years, male, white, stage:Stage IVA, dead, 695 days	1824.8
TCGA-CQ-7068-01A	0 years, female, white, stage:Stage II, alive, 1309 days	1818.8
TCGA-BB-A6UO-01A	0 years, female, white, stage:Stage IVA, dead, 268 days	1818.3
TCGA-CV-A6JZ-01A	0 years, male, white, stage:Stage II, alive, 714 days	1791.0
TCGA-CQ-A4C6-01A	0 years, male, asian, stage:Stage II, alive, 1353 days	1752.8
TCGA-H7-A6C4-01A	0 years, female, white, stage:Stage IVA, dead, 414 days	1724.6
TCGA-QK-A652-01A	0 years, male, white, stage:Stage III, alive, 645 days	1720.1
TCGA-BA-A6DE-01A	0 years, female, white, stage:Stage II, alive, 440 days	1665.4
TCGA-H7-8501-01A	0 years, male, white, stage:Stage IVA, alive, 461 days	1653.4
TCGA-UF-A719-01A	0 years, male, stage:Stage II, alive, 1663 days	1621.1
TCGA-CV-7090-01A	0 years, male, white, stage:Stage II, alive, 5252 days	1612.8
TCGA-CX-7086-01A	0 years, male, black or african american, stage:Stage III, alive, 573 days	1604.4
TCGA-HD-A6I0-01A	0 years, male, white, stage:Stage IVA, alive, 210 days	1601.4
TCGA-CQ-A4CB-01A	0 years, male, stage:Stage III, alive, 893 days	1563.6
TCGA-KU-A6H7-01A	0 years, female, white, stage:Stage IVA, alive, 586 days	1550.9
TCGA-CN-5373-01A	0 years, female, white, stage:Stage I, alive, 1584 days	1533.7
TCGA-CV-A45Q-01A	0 years, female, white, stage:'--, dead, 5152 days	1491.3
TCGA-BA-5556-01A	0 years, female, white, stage:Stage II, alive, 725 days	1483.3
TCGA-DQ-5625-01A	0 years, female, white, stage:'--, dead, 1133 days	1453.6
TCGA-CQ-5325-01A	0 years, male, white, stage:Stage I, dead, 654 days	1445.0
TCGA-MT-A51W-01A	0 years, female, white, stage:Stage I, alive, 437 days	1434.5
TCGA-CV-6954-01A	0 years, male, black or african american, stage:Stage IVA, dead, 2002 days	1421.5
TCGA-CV-7238-01A	0 years, female, white, stage:Stage II, alive, 2727 days	1394.2
TCGA-QK-A6IJ-01A	0 years, male, white, stage:Stage III, alive, 387 days	1388.3
TCGA-CN-4736-01A	0 years, female, white, stage:'--, dead, 395 days	1376.8
TCGA-QK-A6IH-01A	0 years, female, white, stage:Stage IVB, alive, 653 days	1370.9
TCGA-CV-7438-01A	0 years, female, white, stage:Stage I, dead, 194 days	1355.0
TCGA-CV-7433-01A	0 years, male, white, stage:Stage IVA, dead, 601 days	1337.5
TCGA-RS-A6TO-01A	0 years, female, white, stage:Stage IVA, dead, 387 days	1308.4
TCGA-HL-7533-01A	0 years, male, white, stage:'--, alive, 1057 days	1306.9
TCGA-CR-7382-01A	0 years, male, white, stage:Stage IVA, alive, 796 days	1306.0
TCGA-CV-A45T-01A	0 years, female, white, stage:'--, dead, 4856 days	1282.3
TCGA-IQ-A61E-01A	0 years, female, white, stage:Stage III, alive, 1147 days	1268.2
TCGA-CQ-6224-01A	0 years, male, white, stage:Stage IVA, alive, 1721 days	1260.2
TCGA-CQ-6219-01A	0 years, female, white, stage:Stage IVA, dead, 479 days	1232.6
TCGA-CN-A49B-01A	0 years, male, white, stage:Stage III, alive, 904 days	1229.9
TCGA-CQ-5334-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	1220.7
TCGA-CV-6938-01A	0 years, male, white, stage:Stage II, dead, 144 days	1209.0
TCGA-HD-7229-01A	0 years, male, white, stage:Stage IVA, alive, 1027 days	1205.6
TCGA-CR-7386-01A	0 years, male, white, stage:Stage IVA, alive, 1430 days	1200.2
TCGA-D6-A6EO-01A	0 years, male, white, stage:Stage IVA, alive, 759 days	1193.9
TCGA-CV-7099-01A	0 years, female, white, stage:Stage II, dead, 243 days	1190.8
TCGA-CV-5979-01A	0 years, male, white, stage:Stage IVA, alive, 1315 days	1188.9
TCGA-CQ-7065-01A	0 years, male, asian, stage:Stage II, alive, 1628 days	1183.0
TCGA-CQ-6229-01A	0 years, male, white, stage:Stage II, alive, 1179 days	1180.6
TCGA-BB-A5HZ-01A	0 years, male, white, stage:Stage IVA, alive, 827 days	1177.1
TCGA-CQ-5330-01A	0 years, female, white, stage:Stage IVA, alive, 1897 days	1160.8
TCGA-CQ-7063-01A	0 years, female, white, stage:Stage I, alive, 2133 days	1159.2
TCGA-T2-A6X2-01A	0 years, male, white, stage:Stage III, alive, 987 days	1138.4
TCGA-F7-A622-01A	0 years, male, white, stage:Stage III, dead, 359 days	1126.0
TCGA-CV-7428-01A	0 years, male, white, stage:Stage IVA, dead, 1671 days	1109.2
TCGA-CV-7089-01A	0 years, male, white, stage:Stage IVA, dead, 1972 days	1109.1
TCGA-CV-6943-01A	0 years, male, white, stage:Stage III, dead, 602 days	1102.4
TCGA-CQ-A4C7-01A	0 years, male, white, stage:Stage III, dead, 353 days	1090.3
TCGA-CN-5370-01A	0 years, male, white, stage:Stage III, dead, 259 days	1078.0
TCGA-P3-A6T7-01A	0 years, male, white, stage:Stage IVA, dead, 487 days	1037.5
TCGA-QK-A64Z-01A	0 years, female, white, stage:Stage IVA, dead, 641 days	1033.3
TCGA-CR-6478-01A	0 years, female, white, stage:'--, dead, 183 days	1013.7
TCGA-CN-4742-01A	0 years, female, white, stage:Stage IVA, dead, 397 days	1001.3
TCGA-UF-A7JO-01A	0 years, female, white, stage:Stage IVA, dead, 631 days	997.6
TCGA-CV-A6JM-01A	0 years, male, white, stage:'--, dead, 194 days	987.1
TCGA-BA-A6DJ-01A	0 years, male, asian, stage:Stage IVA, dead, 407 days	980.0
TCGA-F7-A623-01A	0 years, male, white, stage:Stage IVA, alive, 616 days	973.3
TCGA-CR-6493-01A	0 years, male, black or african american, stage:Stage IVA, dead, 282 days	963.4
TCGA-CV-7235-01A	0 years, male, white, stage:Stage II, alive, 2347 days	958.1
TCGA-D6-6515-01A	0 years, female, white, stage:Stage II, dead, 403 days	956.7
TCGA-BA-6873-01A	0 years, male, white, stage:Stage IVA, alive, 122 days	953.6
TCGA-D6-A6EK-01A	0 years, male, white, stage:Stage III, alive, 875 days	939.9
TCGA-UF-A7JJ-01A	0 years, male, stage:Stage IVA, alive, 549 days	928.0
TCGA-IQ-7630-01A	0 years, male, white, stage:Stage II, alive, 485 days	925.0
TCGA-CV-6941-01A	0 years, male, white, stage:Stage III, dead, 342 days	925.0
TCGA-BA-6872-01A	0 years, male, white, stage:'--, dead, 384 days	923.9
TCGA-CN-6998-01A	0 years, male, white, stage:Stage IVA, dead, 357 days	921.1
TCGA-CR-7389-01A	0 years, male, black or african american, stage:'--, alive, 392 days	909.6
TCGA-CN-6017-01A	0 years, male, white, stage:Stage IVA, dead, 853 days	904.9
TCGA-CR-7373-01A	0 years, male, white, stage:Stage IVA, alive, 889 days	904.7
TCGA-BB-A6UM-01A	0 years, male, white, stage:Stage III, alive, 393 days	899.8
TCGA-CV-6942-01A	0 years, female, white, stage:Stage II, alive, 4282 days	889.4
TCGA-CV-7435-01A	0 years, female, white, stage:Stage IVA, dead, 4680 days	883.8
TCGA-CN-6018-01A	0 years, female, white, stage:Stage IVA, dead, 580 days	883.1
TCGA-H7-7774-01A	0 years, female, white, stage:Stage IVA, alive, 407 days	880.7
TCGA-CV-7422-01A	0 years, female, white, stage:Stage IVA, dead, 1037 days	861.3
TCGA-HD-8634-01A	0 years, female, white, stage:Stage I, dead, 385 days	850.0
TCGA-HD-8635-01A	0 years, female, white, stage:Stage III, alive, 695 days	848.3
TCGA-CV-A45O-01A	0 years, male, white, stage:'--, alive, 851 days	843.7
TCGA-BA-5558-01A	0 years, male, white, stage:'--, alive, 1995 days	842.4
TCGA-F7-A50G-01A	0 years, male, white, stage:Stage III, alive, 616 days	817.1
TCGA-CV-5976-01A	0 years, male, white, stage:Stage IVA, alive, 1478 days	803.5
TCGA-CQ-5333-01A	0 years, male, white, stage:Stage II, dead, 341 days	798.0
TCGA-CN-A63W-01A	0 years, female, white, stage:Stage IVA, dead, 377 days	792.3
TCGA-CV-5436-01A	0 years, male, stage:Stage IVA, dead, 584 days	788.2
TCGA-DQ-5624-01A	0 years, female, white, stage:'--, alive, 1778 days	780.7
TCGA-CN-5367-01A	0 years, female, white, stage:Stage IVA, dead, 352 days	772.2
TCGA-CV-A45P-01A	0 years, female, white, stage:Stage I, alive, 639 days	769.9
TCGA-CR-6492-01A	0 years, male, white, stage:Stage III, alive, 479 days	769.4
TCGA-CR-7392-01A	0 years, female, white, stage:Stage IVA, alive, 1425 days	763.2
TCGA-CN-4737-01A	0 years, male, white, stage:Stage IVA, alive, 625 days	761.2
TCGA-CN-4723-01A	0 years, male, white, stage:Stage IVA, alive, 1699 days	755.5
TCGA-CN-A6V3-01A	0 years, male, white, stage:Stage IVA, alive, 742 days	749.8
TCGA-CN-A63T-01A	0 years, male, white, stage:Stage IVA, alive, 225 days	748.6
TCGA-BA-A6DA-01A	0 years, female, white, stage:Stage IVA, alive, 351 days	733.3
TCGA-CQ-6220-01A	0 years, male, white, stage:Stage III, dead, 985 days	725.9
TCGA-D6-A74Q-01A	0 years, male, white, stage:Stage IVA, alive, 710 days	724.5
TCGA-UF-A71E-01A	0 years, male, white, stage:Stage IVA, dead, 1504 days	713.8
TCGA-CQ-5327-01A	0 years, female, asian, stage:Stage IVA, alive, 1660 days	710.5
TCGA-UF-A7JC-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	709.5
TCGA-CV-7427-01A	0 years, female, white, stage:Stage II, dead, 4760 days	703.6
TCGA-CN-A642-01A	0 years, male, white, stage:Stage IVB, dead, 82 days	700.9
TCGA-BB-A5HY-01A	0 years, male, white, stage:Stage IVA, dead, 321 days	691.9
TCGA-BB-4225-01A	0 years, male, white, stage:'--, alive, 146 days	688.9
TCGA-CN-6016-01A	0 years, male, white, stage:Stage IVA, alive, 1443 days	686.4
TCGA-CV-7097-01A	0 years, male, white, stage:Stage II, dead, 385 days	686.2
TCGA-QK-A6II-01A	0 years, male, white, stage:Stage IVA, dead, 284 days	684.6
TCGA-MT-A67D-01A	0 years, male, white, stage:Stage II, alive, 56 days	680.5
TCGA-CQ-7069-01A	0 years, female, white, stage:Stage II, alive, 1274 days	673.6
TCGA-BA-A4IF-01A	0 years, male, white, stage:'--, alive, 895 days	672.7
TCGA-CN-5369-01A	0 years, female, white, stage:Stage IVA, dead, 1 days	668.2
TCGA-CV-6433-01A	0 years, male, white, stage:Stage II, alive, 641 days	667.0
TCGA-UF-A7JH-01A	0 years, male, black or african american, stage:Stage IVA, alive, 896 days	665.7
TCGA-CN-5365-01A	0 years, male, white, stage:Stage IVB, dead, 351 days	665.2
TCGA-D6-6823-01A	0 years, male, white, stage:Stage II, alive, 701 days	662.4
TCGA-CN-A6UY-01A	0 years, male, white, stage:Stage IVA, alive, 713 days	660.6
TCGA-CR-7395-01A	0 years, female, white, stage:Stage II, alive, 930 days	649.2
TCGA-CQ-A4CG-01A	0 years, female, white, stage:Stage III, dead, 430 days	648.4
TCGA-CN-5359-01A	0 years, male, white, stage:Stage IVA, dead, 377 days	646.4
TCGA-P3-A5QE-01A	0 years, male, white, stage:Stage III, alive, 1559 days	644.5
TCGA-CV-A465-01A	0 years, male, white, stage:Stage III, dead, 215 days	644.3
TCGA-F7-A61W-01A	0 years, male, asian, stage:Stage IVA, alive, 14 days	637.4
TCGA-F7-A624-01A	0 years, male, white, stage:Stage II, alive, 378 days	633.5
TCGA-CQ-5323-01A	0 years, male, white, stage:Stage I, alive, 1466 days	625.6
TCGA-4P-AA8J-01A	0 years, male, black or african american, stage:Stage IVA, alive, 102 days	619.1
TCGA-DQ-5630-01A	0 years, male, white, stage:'--, alive, 1030 days	615.1
TCGA-CN-A49C-01A	0 years, male, white, stage:'--, alive, 645 days	609.8
TCGA-CV-5978-01A	0 years, female, black or african american, stage:Stage IVB, dead, 215 days	598.0
TCGA-DQ-7592-01A	0 years, male, american indian or alaska native, stage:'--, alive, 1143 days	597.4
TCGA-D6-8569-01A	0 years, male, white, stage:Stage II, alive, 770 days	594.2
TCGA-CN-4734-01A	0 years, male, white, stage:Stage II, alive, 1690 days	592.8
TCGA-C9-A480-01A	0 years, female, asian, stage:Stage III, alive, 386 days	587.3
TCGA-C9-A47Z-01A	0 years, female, asian, stage:Stage III, dead, 191 days	584.3
TCGA-CN-A63U-01A	0 years, male, white, stage:Stage IVA, alive, 964 days	583.7
TCGA-BA-4074-01A	0 years, male, white, stage:Stage IVA, dead, 462 days	580.9
TCGA-UF-A7JV-01A	0 years, female, white, stage:Stage IVA, dead, 90 days	578.5
TCGA-D6-6825-01A	0 years, male, white, stage:Stage I, alive, 491 days	577.6
TCGA-D6-6516-01A	0 years, male, white, stage:Stage I, alive, 773 days	574.1
TCGA-F7-A50J-01A	0 years, female, white, stage:Stage III, alive, 947 days	573.9
TCGA-CN-6023-01A	0 years, male, white, stage:Stage IVA, alive, 1584 days	565.4
TCGA-D6-A4Z9-01A	0 years, male, white, stage:Stage IVA, alive, 539 days	560.8
TCGA-CQ-5326-01A	0 years, male, white, stage:Stage IVA, dead, 89 days	559.1
TCGA-D6-A6ES-01A	0 years, male, white, stage:Stage IVA, alive, 389 days	554.4
TCGA-CN-5363-01A	0 years, male, black or african american, stage:Stage IVB, dead, 253 days	550.9
TCGA-BA-A6DB-01A	0 years, female, white, stage:Stage I, alive, 216 days	545.3
TCGA-D6-8568-01A	0 years, male, white, stage:Stage II, alive, 759 days	541.2
TCGA-CR-7368-01A	0 years, male, white, stage:Stage IVA, alive, 1245 days	539.3
TCGA-F7-8489-01A	0 years, male, white, stage:Stage II, alive, 658 days	530.1
TCGA-BA-5557-01A	0 years, female, stage:Stage III, alive, 623 days	530.1
TCGA-CV-7255-01A	0 years, female, white, stage:Stage IVA, dead, 64 days	524.4
TCGA-CQ-5329-01A	0 years, female, white, stage:Stage II, alive, 2143 days	521.5
TCGA-CV-7425-01A	0 years, female, white, stage:Stage III, dead, 1718 days	519.0
TCGA-CV-6934-01A	0 years, female, white, stage:Stage IVA, dead, 65 days	518.4
TCGA-CR-6477-01A	0 years, female, white, stage:'--, alive, 514 days	517.6
TCGA-TN-A7HI-01A	0 years, male, white, stage:Stage IVA, alive, 412 days	516.6
TCGA-F7-A50I-01A	0 years, male, white, stage:Stage IVA, alive, 92 days	513.6
TCGA-BA-5151-01A	0 years, male, white, stage:Stage IVA, alive, 722 days	512.4
TCGA-CV-7252-01A	0 years, female, black or african american, stage:Stage IVA, dead, 151 days	509.4
TCGA-CR-7394-01A	0 years, male, white, stage:Stage IVA, alive, 1346 days	507.6
TCGA-CN-A6V6-01A	0 years, male, white, stage:Stage IVA, alive, 635 days	505.5
TCGA-HD-7753-01A	0 years, male, black or african american, stage:Stage I, alive, 866 days	498.6
TCGA-CV-A6K2-01A	0 years, male, white, stage:Stage IVA, dead, 317 days	495.5
TCGA-KU-A66T-01A	0 years, female, white, stage:Stage IVA, alive, 552 days	494.5
TCGA-UF-A71B-01A	0 years, male, white, stage:Stage IVA, alive, 1506 days	493.7
TCGA-CV-7421-01A	0 years, male, white, stage:Stage IVA, dead, 2 days	492.8
TCGA-T3-A92M-01A	0 years, male, black or african american, stage:Stage IVA, alive, 417 days	487.4
TCGA-CV-6950-01A	0 years, male, white, stage:Stage IVA, dead, 459 days	486.7
TCGA-CN-4733-01A	0 years, male, white, stage:Stage III, alive, 1586 days	483.0
TCGA-CR-7401-01A	0 years, male, white, stage:Stage I, alive, 1077 days	482.7
TCGA-CV-7429-01A	0 years, male, white, stage:Stage IVA, dead, 107 days	476.5
TCGA-CV-7100-01A	0 years, male, white, stage:Stage III, dead, 274 days	474.0
TCGA-CV-7414-01A	0 years, male, white, stage:Stage IVA, dead, 14 days	472.8
TCGA-CV-A45X-01A	0 years, male, white, stage:Stage IVA, dead, 198 days	471.8
TCGA-CV-5434-01A	0 years, male, black or african american, stage:Stage IVA, dead, 3314 days	465.4
TCGA-BA-A6DL-01A	0 years, male, white, stage:'--, alive, 623 days	461.0
TCGA-CQ-5324-01A	0 years, male, white, stage:Stage III, alive, 1593 days	460.8
TCGA-CR-7383-01A	0 years, female, white, stage:Stage I, dead, 521 days	460.7
TCGA-TN-A7HJ-01A	0 years, male, white, stage:Stage IVA, alive, 403 days	456.6
TCGA-QK-A8Z8-01A	0 years, female, black or african american, stage:Stage IVC, dead, 171 days	451.7
TCGA-T3-A92N-01A	0 years, male, black or african american, stage:Stage IVA, dead, 95 days	451.7
TCGA-BA-7269-01A	0 years, male, white, stage:Stage III, alive, 1273 days	433.6
TCGA-CV-A463-01A	0 years, female, white, stage:Stage IVA, dead, 23 days	433.0
TCGA-CQ-6227-01A	0 years, male, white, stage:Stage IVA, dead, 129 days	429.9
TCGA-CV-6951-01A	0 years, male, white, stage:Stage IVA, dead, 915 days	411.8
TCGA-CQ-6228-01A	0 years, female, white, stage:Stage IVA, dead, 456 days	411.6
TCGA-BA-5555-01A	0 years, male, black or african american, stage:Stage IVA, alive, 520 days	409.7
TCGA-QK-AA3K-01A	0 years, male, black or african american, stage:Stage IVA, alive, 253 days	409.6
TCGA-CN-5361-01A	0 years, male, white, stage:Stage IVA, dead, 2120 days	407.6
TCGA-QK-A6VC-01A	0 years, female, black or african american, stage:Stage IVA, alive, 600 days	398.2
TCGA-CQ-6223-01A	0 years, male, white, stage:Stage II, alive, 1428 days	396.1
TCGA-CV-5441-01A	0 years, male, white, stage:Stage IVA, alive, 2886 days	395.2
TCGA-P3-A5QA-01A	0 years, male, stage:Stage I, alive, 2182 days	394.7
TCGA-CX-A4AQ-01A	0 years, male, white, stage:Stage IVA, alive, 1555 days	392.7
TCGA-P3-A5QF-01A	0 years, male, white, stage:Stage IVA, dead, 330 days	392.1
TCGA-CQ-A4C9-01A	0 years, male, stage:Stage III, alive, 707 days	390.7
TCGA-CN-4731-01A	0 years, female, white, stage:Stage IVA, dead, 998 days	390.0
TCGA-CN-6020-01A	0 years, male, black or african american, stage:Stage III, dead, 205 days	382.1
TCGA-WA-A7GZ-01A	0 years, male, white, stage:'--, dead, 625 days	381.5
TCGA-BA-A4IH-01A	0 years, male, white, stage:'--, alive, 622 days	380.1
TCGA-CV-6959-01A	0 years, male, white, stage:Stage III, dead, 256 days	375.6
TCGA-CX-7085-01A	0 years, female, white, stage:Stage I, alive, 321 days	375.2
TCGA-CV-7236-01A	0 years, female, white, stage:Stage IVA, dead, 144 days	374.3
TCGA-CV-6441-01A	0 years, male, white, stage:Stage III, dead, 292 days	373.3
TCGA-P3-A6T8-01A	0 years, male, white, stage:Stage IVA, alive, 400 days	367.0
TCGA-CV-7095-01A	0 years, female, stage:Stage II, dead, 572 days	363.2
TCGA-H7-8502-01A	0 years, male, white, stage:Stage IVA, alive, 458 days	362.1
TCGA-BA-A8YP-01A	0 years, male, black or african american, stage:Stage IVB, alive, 499 days	359.9
TCGA-MT-A51X-01A	0 years, male, white, stage:Stage IVA, alive, 242 days	358.3
TCGA-CN-6013-01A	0 years, male, white, stage:Stage IVA, dead, 727 days	357.3
TCGA-D6-A6EP-01A	0 years, male, white, stage:Stage III, alive, 424 days	345.2
TCGA-CN-4727-01A	0 years, male, white, stage:Stage IVA, alive, 1560 days	344.3
TCGA-CV-7416-01A	0 years, female, white, stage:Stage IVA, dead, 763 days	344.1
TCGA-CN-5364-01A	0 years, male, white, stage:Stage IVA, dead, 493 days	334.0
TCGA-CV-A45Z-01A	0 years, male, white, stage:'--, dead, 1466 days	332.2
TCGA-CR-7404-01A	0 years, male, white, stage:'--, alive, 1472 days	330.7
TCGA-CN-5366-01A	0 years, male, white, stage:Stage IVA, dead, 360 days	329.8
TCGA-CR-7377-01A	0 years, male, white, stage:Stage IVA, dead, 279 days	329.7
TCGA-CV-6945-01A	0 years, male, white, stage:Stage IVA, dead, 366 days	327.5
TCGA-KU-A66S-01A	0 years, female, white, stage:Stage III, dead, 406 days	320.0
TCGA-P3-A6T2-01A	0 years, male, white, stage:Stage IVA, alive, 2298 days	319.6
TCGA-P3-A6T4-01A	0 years, male, white, stage:Stage IVA, dead, 62 days	316.5
TCGA-RS-A6TP-01A	0 years, male, white, stage:Stage II, alive, 516 days	314.5
TCGA-CR-7376-01A	0 years, male, white, stage:Stage III, alive, 972 days	311.8
TCGA-UF-A718-01A	0 years, male, white, stage:Stage IVA, alive, 1971 days	310.2
TCGA-CR-6488-01A	0 years, female, white, stage:Stage II, alive, 379 days	303.5
TCGA-CN-4728-01A	0 years, male, white, stage:Stage IVA, alive, 1724 days	301.2
TCGA-CX-7082-01A	0 years, male, white, stage:Stage IVA, dead, 11 days	297.0
TCGA-IQ-A61G-01A	0 years, male, white, stage:Stage IVA, alive, 360 days	296.9
TCGA-CR-7398-01A	0 years, female, white, stage:Stage II, alive, 156 days	295.0
TCGA-CX-7219-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1045 days	294.5
TCGA-QK-A6VB-01A	0 years, male, white, stage:Stage IVA, alive, 641 days	293.4
TCGA-CV-7432-01A	0 years, male, white, stage:Stage II, dead, 2570 days	291.3
TCGA-UF-A71D-01A	0 years, female, white, stage:Stage IVA, alive, 1461 days	288.5
TCGA-TN-A7HL-01A	0 years, male, white, stage:Stage IVA, alive, 619 days	285.9
TCGA-CV-A460-01A	0 years, male, white, stage:'--, dead, 1838 days	285.6
TCGA-CQ-6222-01A	0 years, male, white, stage:Stage IVA, alive, 2016 days	282.3
TCGA-BA-A6D8-01A	0 years, male, black or african american, stage:Stage IVA, alive, 850 days	280.7
TCGA-CV-6936-01A	0 years, male, white, stage:Stage IVA, dead, 166 days	279.2
TCGA-CV-7250-01A	0 years, male, white, stage:Stage IVA, dead, 2900 days	279.0
TCGA-CV-A45V-01A	0 years, female, white, stage:Stage IVA, dead, 32 days	276.3
TCGA-H7-A76A-01A	0 years, male, white, stage:'--, alive, 637 days	275.1
TCGA-CQ-A4CH-01A	0 years, male, asian, stage:Stage II, dead, 379 days	272.9
TCGA-MT-A7BN-01A	0 years, male, white, stage:Stage IVA, alive, 469 days	261.9
TCGA-CN-6012-01A	0 years, male, white, stage:Stage IVA, alive, 1460 days	259.9
TCGA-CV-7407-01A	0 years, female, white, stage:Stage II, dead, 1081 days	258.6
TCGA-CV-7413-01A	0 years, female, white, stage:Stage II, dead, 294 days	250.7
TCGA-CR-6474-01A	0 years, male, white, stage:Stage IVA, dead, 564 days	249.7
TCGA-CV-7418-01A	0 years, male, black or african american, stage:Stage IVA, dead, 789 days	245.3
TCGA-CN-6995-01A	0 years, male, white, stage:Stage IVA, dead, 112 days	244.7
TCGA-BA-6870-01A	0 years, female, black or african american, stage:'--, dead, 451 days	240.8
TCGA-CV-5970-01A	0 years, male, white, stage:Stage IVA, dead, 406 days	239.9
TCGA-CR-7369-01A	0 years, male, white, stage:Stage IVA, dead, 1090 days	238.7
TCGA-CR-5247-01A	0 years, male, black or african american, stage:'--, alive, 358 days	232.2
TCGA-CR-7372-01A	0 years, male, white, stage:Stage I, alive, 759 days	230.4
TCGA-CR-6487-01A	0 years, male, white, stage:Stage I, alive, 234 days	229.7
TCGA-IQ-7632-01A	0 years, female, white, stage:Stage IVA, alive, 441 days	229.6
TCGA-CV-6933-01A	0 years, male, white, stage:Stage III, dead, 2741 days	229.2
TCGA-CV-5971-01A	0 years, male, white, stage:Stage IVA, alive, 701 days	226.8
TCGA-CR-6484-01A	0 years, female, asian, stage:Stage IVA, alive, 354 days	226.7
TCGA-BA-A4IG-01A	0 years, male, white, stage:'--, alive, 855 days	226.3
TCGA-CN-A6V7-01A	0 years, male, white, stage:Stage IVA, alive, 594 days	225.4
TCGA-CN-4726-01A	0 years, male, white, stage:Stage IVA, dead, 142 days	224.9
TCGA-MZ-A7D7-01A	0 years, male, white, stage:Stage IVA, alive, 547 days	224.4
TCGA-CV-7423-01A	0 years, male, white, stage:Stage II, dead, 3059 days	223.9
TCGA-CV-6937-01A	0 years, male, white, stage:Stage II, dead, 624 days	222.5
TCGA-HD-8314-01A	0 years, male, white, stage:Stage III, alive, 670 days	222.3
TCGA-QK-A8ZA-01A	0 years, male, black or african american, stage:'--, dead, 371 days	222.1
TCGA-DQ-5629-01A	0 years, male, white, stage:'--, dead, 941 days	221.8
TCGA-CQ-6221-01A	0 years, male, white, stage:'--, alive, 1000 days	221.4
TCGA-D6-6824-01A	0 years, male, white, stage:Stage IVA, alive, 77 days	221.3
TCGA-CV-7263-01A	0 years, male, black or african american, stage:Stage II, dead, 560 days	217.8
TCGA-D6-6826-01A	0 years, female, white, stage:Stage IVA, dead, 348 days	216.5
TCGA-CV-A45U-01A	0 years, male, white, stage:Stage IVA, dead, 1079 days	216.4
TCGA-CV-7091-01A	0 years, male, white, stage:Stage I, alive, 3381 days	215.8
TCGA-CR-7365-01A	0 years, male, white, stage:Stage IVA, alive, 1191 days	211.5
TCGA-MZ-A5BI-01A	0 years, male, white, stage:'--, dead, 217 days	210.3
TCGA-CV-7245-01A	0 years, male, white, stage:Stage IVA, alive, 797 days	209.2
TCGA-P3-A5Q6-01A	0 years, male, white, stage:Stage IVA, dead, 480 days	208.4
TCGA-CN-6988-01A	0 years, male, white, stage:Stage IVA, alive, 318 days	203.3
TCGA-CV-7248-01A	0 years, female, black or african american, stage:Stage IVA, dead, 521 days	201.3
TCGA-CV-6960-01A	0 years, male, black or african american, stage:Stage III, dead, 862 days	200.4
TCGA-CR-5243-01A	0 years, male, white, stage:'--, alive, 2562 days	199.4
TCGA-CN-6989-01A	0 years, male, white, stage:Stage IVA, dead, 980 days	198.0
TCGA-CV-6955-01A	0 years, female, white, stage:Stage II, dead, 334 days	197.0
TCGA-CV-6961-01A	0 years, male, white, stage:Stage II, dead, 76 days	195.5
TCGA-CR-6480-01A	0 years, male, white, stage:'--, alive, 362 days	194.2
TCGA-CR-6482-01A	0 years, male, black or african american, stage:'--, alive, 345 days	193.6
TCGA-MT-A67A-01A	0 years, female, white, stage:Stage I, alive, 914 days	191.1
TCGA-BA-4075-01A	0 years, male, black or african american, stage:Stage III, dead, 283 days	188.7
TCGA-BA-A4II-01A	0 years, male, white, stage:Stage II, alive, 918 days	188.1
TCGA-D6-A6EQ-01A	0 years, male, white, stage:Stage IVA, alive, 368 days	187.3
TCGA-UF-A7JD-01A	0 years, male, stage:Stage IVA, dead, 739 days	187.0
TCGA-CV-A45Y-01A	0 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days	186.2
TCGA-CV-5439-01A	0 years, male, white, stage:Stage IVA, dead, 546 days	182.3
TCGA-CQ-7071-01A	0 years, female, white, stage:Stage III, alive, 1311 days	182.2
TCGA-BA-6869-01A	0 years, male, white, stage:Stage III, alive, 644 days	181.2
TCGA-CV-7178-01A	0 years, female, white, stage:Stage IVA, dead, 2166 days	180.7
TCGA-CV-7242-01A	0 years, female, white, stage:Stage II, alive, 1095 days	179.7
TCGA-CN-A497-01A	0 years, male, stage:Stage III, alive, 1065 days	176.5
TCGA-CR-7397-01A	0 years, male, white, stage:Stage IVA, alive, 754 days	176.0
TCGA-BA-6871-01A	0 years, male, white, stage:'--, dead, 108 days	173.7
TCGA-CR-7380-01A	0 years, male, white, stage:Stage IVB, dead, 606 days	173.7
TCGA-CN-A49A-01A	0 years, male, white, stage:Stage IVB, dead, 526 days	173.0
TCGA-UP-A6WW-01A	0 years, male, white, stage:'--, alive, 518 days	172.8
TCGA-CR-7391-01A	0 years, female, white, stage:Stage I, alive, 913 days	171.0
TCGA-BA-A6DG-01A	0 years, male, white, stage:'--, dead, 69 days	170.6
TCGA-P3-A6SX-01A	0 years, male, white, stage:Stage III, dead, 1430 days	169.7
TCGA-CV-5430-01A	0 years, male, white, stage:Stage IVA, alive, 4241 days	165.3
TCGA-IQ-A61J-01A	0 years, male, white, stage:Stage IVA, alive, 1021 days	165.3
TCGA-CN-6022-01A	0 years, male, white, stage:Stage IVA, dead, 281 days	164.8
TCGA-CN-A498-01A	0 years, female, white, stage:Stage III, dead, 773 days	163.9
TCGA-BB-4217-01A	0 years, male, black or african american, stage:Stage IVA, alive, 187 days	162.9
TCGA-F7-8298-01A	0 years, male, white, stage:Stage I, alive, 995 days	161.7
TCGA-CN-4735-01A	0 years, male, white, stage:Stage IVA, alive, 1737 days	159.8
TCGA-CV-A6JY-01A	0 years, male, white, stage:Stage IVA, alive, 646 days	159.4
TCGA-MZ-A6I9-01A	0 years, male, white, stage:'--, dead, 489 days	158.0
TCGA-IQ-A61O-01A	0 years, male, white, stage:Stage IVA, dead, 421 days	157.8
TCGA-CN-4740-01A	0 years, female, white, stage:Stage IVA, dead, 839 days	156.4
TCGA-IQ-7631-01A	0 years, female, white, stage:Stage II, alive, 1172 days	154.4
TCGA-CR-6471-01A	0 years, male, white, stage:Stage IVA, dead, 1202 days	154.1
TCGA-CR-7371-01A	0 years, female, white, stage:Stage III, dead, 94 days	151.1
TCGA-T2-A6X0-01A	0 years, male, white, stage:'--, alive, 216 days	150.6
TCGA-CR-7399-01A	0 years, female, white, stage:Stage IVA, alive, 181 days	149.1
TCGA-CV-7446-01A	0 years, male, white, stage:Stage IVA, dead, 1093 days	148.3
TCGA-CR-7385-01A	0 years, male, white, stage:'--, alive, 997 days	146.0
TCGA-UF-A7JA-01A	0 years, female, white, stage:Stage IVA, alive, 2265 days	144.8
TCGA-D6-6517-01A	0 years, male, white, stage:Stage III, alive, 292 days	143.4
TCGA-CV-6953-01A	0 years, female, white, stage:Stage III, dead, 1641 days	142.1
TCGA-CR-6473-01A	0 years, male, white, stage:'--, alive, 1125 days	137.1
TCGA-HD-A4C1-01A	0 years, female, black or african american, stage:Stage IVA, alive, 11 days	136.5
TCGA-CV-7410-01A	0 years, male, white, stage:Stage III, dead, 6417 days	135.7
TCGA-CQ-A4CE-01A	0 years, female, stage:Stage II, alive, 897 days	134.4
TCGA-CR-7370-01A	0 years, female, white, stage:'--, alive, 105 days	134.1
TCGA-CV-7180-01A	0 years, male, white, stage:Stage II, dead, 327 days	134.1
TCGA-CN-5360-01A	0 years, male, white, stage:Stage IVA, alive, 2169 days	132.9
TCGA-UF-A7JF-01A	0 years, male, white, stage:Stage IVA, alive, 1686 days	132.7
TCGA-P3-A5Q5-01A	0 years, male, white, stage:Stage IVA, alive, 910 days	131.5
TCGA-CV-5435-01A	0 years, male, white, stage:Stage IVA, dead, 2319 days	130.5
TCGA-CR-7379-01A	0 years, female, white, stage:Stage IVA, alive, 1036 days	127.7
TCGA-CV-7437-01A	0 years, male, stage:Stage II, dead, 506 days	127.6
TCGA-CR-7374-01A	0 years, female, white, stage:'--, alive, 30 days	125.0
TCGA-DQ-5631-01A	0 years, male, white, stage:'--, dead, 548 days	123.6
TCGA-CV-7424-01A	0 years, male, asian, stage:Stage IVA, dead, 453 days	123.2
TCGA-CR-7393-01A	0 years, male, white, stage:Stage III, alive, 993 days	123.0
TCGA-D6-A4ZB-01A	0 years, male, white, stage:Stage III, alive, 376 days	122.4
TCGA-CN-4725-01A	0 years, male, white, stage:Stage II, alive, 1157 days	120.7
TCGA-CN-5358-01A	0 years, male, white, stage:Stage II, dead, 261 days	120.6
TCGA-UF-A7JK-01A	0 years, male, stage:Stage IVA, dead, 424 days	119.7
TCGA-CN-6024-01A	0 years, male, white, stage:Stage IVA, dead, 337 days	119.0
TCGA-CR-6491-01A	0 years, male, black or african american, stage:Stage IVA, alive, 693 days	118.8
TCGA-CN-4730-01A	0 years, male, white, stage:Stage IVA, alive, 817 days	118.0
TCGA-QK-AA3J-01A	0 years, male, black or african american, stage:Stage I, alive, 466 days	118.0
TCGA-CN-6019-01A	0 years, male, white, stage:Stage IVA, alive, 1038 days	117.8
TCGA-CV-7254-01A	0 years, male, white, stage:Stage II, dead, 1459 days	117.4
TCGA-F7-7848-01A	0 years, male, white, stage:Stage IVA, alive, 1131 days	117.2
TCGA-QK-A6V9-01A	0 years, male, white, stage:Stage II, alive, 833 days	112.2
TCGA-P3-A6SW-01A	0 years, male, white, stage:Stage IVB, alive, 1120 days	110.8
TCGA-DQ-7591-01A	0 years, male, white, stage:'--, alive, 622 days	109.5
TCGA-BB-4223-01A	0 years, male, white, stage:Stage IVA, alive, 3221 days	108.3
TCGA-CV-5443-01A	0 years, male, black or african american, stage:Stage III, alive, 2784 days	108.3
TCGA-BA-5559-01A	0 years, male, white, stage:'--, dead, 2083 days	105.4
TCGA-CN-4729-01A	0 years, male, white, stage:Stage III, alive, 392 days	104.9
TCGA-CN-4738-01A	0 years, male, white, stage:Stage IVA, dead, 436 days	104.2
TCGA-CR-6481-01A	0 years, male, white, stage:'--, alive, 311 days	101.5
TCGA-CR-6467-01A	0 years, male, white, stage:Stage III, alive, 1777 days	99.7
TCGA-CR-6470-01A	0 years, male, white, stage:Stage II, alive, 1521 days	99.4
TCGA-CV-7102-01A	0 years, female, white, stage:Stage IVA, dead, 56 days	99.3
TCGA-CQ-7072-01A	0 years, male, white, stage:Stage II, alive, 2359 days	98.8
TCGA-P3-A6T6-01A	0 years, male, white, stage:Stage IVA, dead, 395 days	98.1
TCGA-WA-A7H4-01A	0 years, male, white, stage:Stage II, alive, 443 days	97.6
TCGA-BB-8596-01A	0 years, female, white, stage:Stage IVA, alive, 2161 days	96.8
TCGA-CV-5440-01A	0 years, male, white, stage:Stage IVA, alive, 3270 days	94.6
TCGA-CN-6994-01A	0 years, male, white, stage:Stage IVA, alive, 1183 days	94.6
TCGA-QK-A8ZB-01A	0 years, male, black or african american, stage:Stage IVA, alive, 542 days	94.2
TCGA-CV-7411-01A	0 years, female, white, stage:Stage IVA, dead, 2717 days	93.4
TCGA-HD-A633-01A	0 years, male, white, stage:Stage IVA, alive, 421 days	93.4
TCGA-CV-6939-01A	0 years, male, white, stage:Stage IVA, dead, 666 days	92.0
TCGA-P3-A6T3-01A	0 years, male, white, stage:Stage IVA, dead, 577 days	90.2
TCGA-BA-A6DI-01A	0 years, male, black or african american, stage:'--, dead, 336 days	89.4
TCGA-BA-5153-01A	0 years, male, white, stage:'--, dead, 1762 days	89.3
TCGA-HD-8224-01A	0 years, male, white, stage:Stage IVA, dead, 446 days	87.1
TCGA-CV-7440-01A	0 years, male, white, stage:Stage II, dead, 675 days	85.3
TCGA-CN-A641-01A	0 years, male, white, stage:Stage IVA, alive, 367 days	84.2
TCGA-CV-7253-01A	0 years, male, black or african american, stage:Stage IVA, dead, 361 days	82.8
TCGA-CV-7247-01A	0 years, male, white, stage:Stage III, dead, 577 days	80.4
TCGA-CV-5432-01A	0 years, male, white, stage:Stage III, alive, 3930 days	79.7
TCGA-UF-A7J9-01A	0 years, male, white, stage:Stage IVA, alive, 1358 days	79.5
TCGA-CV-7103-01A	0 years, male, white, stage:Stage IVA, dead, 1591 days	77.9
TCGA-CV-5431-01A	0 years, male, white, stage:Stage IVA, dead, 522 days	76.7
TCGA-CV-7568-01A	0 years, female, white, stage:Stage IVA, dead, 927 days	76.4
TCGA-HD-A6HZ-01A	0 years, female, white, stage:Stage III, alive, 111 days	74.5
TCGA-QK-A6IF-01A	0 years, male, white, stage:'--, alive, 704 days	74.3
TCGA-BB-4224-01A	0 years, male, white, stage:Stage IVA, alive, 278 days	73.6
TCGA-CR-7402-01A	0 years, male, white, stage:'--, alive, 911 days	73.6
TCGA-CV-A45W-01A	0 years, male, white, stage:Stage II, dead, 1398 days	72.7
TCGA-CR-7388-01A	0 years, female, white, stage:'--, dead, 823 days	71.4
TCGA-CN-6992-01A	0 years, male, white, stage:Stage IVA, alive, 1066 days	70.8
TCGA-HD-A634-01A	0 years, male, white, stage:Stage IVA, dead, 130 days	68.8
TCGA-CR-6472-01A	0 years, male, white, stage:'--, alive, 1050 days	66.0
TCGA-CV-7261-01A	0 years, male, white, stage:Stage IVA, alive, 1512 days	65.5
TCGA-CR-5250-01A	0 years, male, white, stage:'--, alive, 799 days	65.3
TCGA-BA-4078-01A	0 years, male, white, stage:'--, dead, 276 days	64.5
TCGA-CV-7183-01A	0 years, male, white, stage:Stage II, alive, 3981 days	64.0
TCGA-BB-A5HU-01A	0 years, male, white, stage:Stage IVA, alive, 782 days	63.2
TCGA-CN-4741-01A	0 years, male, white, stage:Stage IVA, alive, 2239 days	62.9
TCGA-CR-7367-01A	0 years, male, white, stage:Stage IVA, alive, 1440 days	61.4
TCGA-IQ-A6SG-01A	0 years, female, white, stage:Stage III, alive, 579 days	61.1
TCGA-HD-7831-01A	0 years, male, white, stage:Stage IVA, alive, 667 days	60.8
TCGA-CV-6940-01A	0 years, female, white, stage:Stage III, dead, 804 days	60.2
TCGA-CN-6997-01A	0 years, male, white, stage:Stage IVA, dead, 988 days	59.7
TCGA-CR-5248-01A	0 years, male, white, stage:'--, alive, 1663 days	59.6
TCGA-CQ-A4CI-01A	0 years, male, white, stage:Stage III, alive, 950 days	59.1
TCGA-CQ-5332-01A	0 years, male, white, stage:Stage III, dead, 317 days	58.3
TCGA-CR-5249-01A	0 years, female, white, stage:Stage II, alive, 1152 days	55.6
TCGA-CV-7406-01A	0 years, male, white, stage:Stage II, dead, 1748 days	54.9
TCGA-CV-7177-01A	0 years, female, white, stage:Stage II, dead, 663 days	53.7
TCGA-CN-A63V-01A	0 years, male, white, stage:Stage IVA, alive, 679 days	53.5
TCGA-CN-5374-01A	0 years, female, white, stage:Stage IVA, dead, 1732 days	52.6
TCGA-HD-7754-01A	0 years, male, white, stage:Stage IVA, alive, 783 days	52.2
TCGA-CV-7430-01A	0 years, male, white, stage:Stage IVA, dead, 495 days	51.3
TCGA-CV-6962-01A	0 years, male, white, stage:Stage IVA, dead, 126 days	49.6
TCGA-BB-4227-01A	0 years, male, white, stage:Stage IVA, alive, 134 days	49.2
TCGA-DQ-7588-01A	0 years, male, white, stage:'--, dead, 427 days	49.0
TCGA-F7-A61V-01A	0 years, male, white, stage:Stage II, alive, 759 days	48.5
TCGA-CV-7101-01A	0 years, male, white, stage:Stage II, dead, 160 days	48.1
TCGA-CN-4739-01A	0 years, male, white, stage:Stage IVA, dead, 1394 days	47.2
TCGA-IQ-A61H-01A	0 years, male, white, stage:Stage II, alive, 1138 days	45.5
TCGA-CN-5356-01A	0 years, male, white, stage:Stage III, alive, 1409 days	44.3
TCGA-CV-6935-01A	0 years, male, white, stage:Stage IVA, dead, 295 days	43.3
TCGA-BB-4228-01A	0 years, male, white, stage:Stage III, alive, 559 days	41.6
TCGA-CN-6010-01A	0 years, male, white, stage:Stage IVA, alive, 1523 days	39.7
TCGA-CN-5355-01A	0 years, male, black or african american, stage:Stage IVA, alive, 1278 days	38.5
TCGA-CR-7364-01A	0 years, male, white, stage:Stage III, alive, 1435 days	37.9
TCGA-QK-A8Z7-01A	0 years, male, black or african american, stage:Stage IVA, alive, 392 days	36.6
TCGA-CV-6948-01A	0 years, female, white, stage:Stage IVB, dead, 1289 days	35.7
TCGA-UF-A71A-01A	0 years, male, white, stage:Stage IVA, dead, 86 days	35.4
TCGA-CQ-6225-01A	0 years, male, white, stage:Stage III, dead, 403 days	32.4
TCGA-KU-A6H8-01A	0 years, male, white, stage:Stage IVA, dead, 327 days	27.8
TCGA-D6-6827-01A	0 years, female, white, stage:Stage I, alive, 568 days	26.9
TCGA-CN-6021-01A	0 years, female, white, stage:'--, dead, 276 days	26.8
TCGA-P3-A6T0-01A	0 years, female, white, stage:Stage IVA, alive, 578 days	26.8
TCGA-CV-5442-01A	0 years, female, white, stage:Stage IVA, alive, 2327 days	26.2
TCGA-CR-7390-01A	0 years, male, white, stage:Stage IVA, alive, 1508 days	20.3
TCGA-BA-4076-01A	0 years, male, white, stage:'--, dead, 415 days	19.4
TCGA-CN-4722-01A	0 years, female, white, stage:Stage II, alive, 1483 days	12.7
TCGA-BB-8601-01A	0 years, male, black or african american, stage:Stage III, alive, 624 days	6.4
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)

Number of samples

183

Samples

Sample ID	Sample type	nRPX
CPT0220610003	Tumor	2.6
CPT0236620003	Tumor	2.4
CPT0235910003	Tumor	1.8
CPT0163790003	Tumor	1.7
CPT0195680003	Tumor	1.6
CPT0008630003	Tumor	1.5
CPT0163340003	Tumor	1.5
CPT0013210004	Tumor	1.4
CPT0184530003	Tumor	1.3
CPT0094280004	Tumor	1.3
CPT0194420003	Tumor	1.3
CPT0177200003	Tumor	1.3
CPT0087990003	Tumor	1.3
CPT0163650003	Tumor	1.2
CPT0226440003	Tumor	1.1
CPT0223970003	Tumor	1.1
CPT0222180003	Tumor	1.0
CPT0201830004	Tumor	0.8
CPT0163530003	Tumor	0.7
CPT0088410003	Tumor	0.7
CPT0245550003	Tumor	0.7
CPT0011130005	Tumor	0.6
CPT0246670003	Tumor	0.6
CPT0244940004	Tumor	0.6
CPT0248330003	Tumor	0.6
CPT0207870004	Tumor	0.5
CPT0226030003	Tumor	0.5
CPT0223450003	Tumor	0.5
CPT0163910003	Tumor	0.5
CPT0194960003	Tumor	0.4
CPT0176770003	Tumor	0.3
CPT0024810003	Tumor	0.3
CPT0169730003	Tumor	0.3
CPT0095040003	Tumor	0.2
CPT0163090003	Tumor	0.2
CPT0248520003	Tumor	0.2
CPT0226130003	Tumor	0.2
CPT0196210003	Tumor	0.2
CPT0244890004	Tumor	0.1
CPT0163480003	Tumor	0.1
CPT0008930003	Tumor	0.1
CPT0087820003	Tumor	0.1
CPT0123180003	Tumor	0.0
CPT0194800003	Normal	0.0
CPT0162940003	Tumor	0.0
CPT0241980004	Tumor	0.0
CPT0245400003	Tumor	0.0
CPT0084630009	Tumor	-0.1
CPT0163600003	Tumor	-0.1
CPT0195860003	Tumor	-0.1
CPT0245500003	Tumor	-0.1
CPT0013130003	Tumor	-0.1
CPT0236850004	Tumor	-0.1
CPT0245630003	Tumor	-0.1
CPT0011290003	Tumor	-0.2
CPT0123260003	Tumor	-0.2
CPT0237130004	Tumor	-0.2
CPT0196040003	Tumor	-0.2
CPT0163740003	Tumor	-0.3
CPT0163410003	Tumor	-0.3
CPT0245730003	Tumor	-0.3
CPT0094420004	Tumor	-0.3
CPT0163840003	Tumor	-0.3
CPT0169640003	Tumor	-0.3
CPT0226250004	Tumor	-0.3
CPT0222360003	Tumor	-0.4
CPT0235460003	Tumor	-0.4
CPT0226340003	Tumor	-0.4
CPT0008520008	Tumor	-0.5
CPT0094560004	Tumor	-0.5
CPT0199700003	Tumor	-0.5
CPT0226390003	Tumor	-0.5
CPT0163720003	Normal	-0.5
CPT0177220003	Normal	-0.5
CPT0199820003	Tumor	-0.5
CPT0177390003	Tumor	-0.5
CPT0245600003	Tumor	-0.6
CPT0226400003	Normal	-0.6
CPT0246620003	Tumor	-0.6
CPT0245300003	Tumor	-0.7
CPT0199880003	Tumor	-0.7
CPT0246590003	Tumor	-0.7
CPT0195700003	Normal	-0.7
CPT0245190003	Normal	-0.7
CPT0013250003	Normal	-0.7
C3N-04279-05	Normal	-0.7
CPT0123280003	Normal	-0.8
CPT0245010003	Tumor	-0.8
C3N-00295-05	Normal	-0.8
CPT0013430003	Tumor	-0.8
CPT0163430003	Normal	-0.8
CPT0245180003	Tumor	-0.8
CPT0235920003	Normal	-0.9
CPT0245350003	Tumor	-0.9
CPT0163800003	Normal	-0.9
CPT0195880003	Normal	-0.9
CPT0243140004	Normal	-0.9
CPT0169890003	Tumor	-0.9
CPT0220620003	Normal	-1.0
CPT0013460003	Normal	-1.0
CPT0013000004	Tumor	-1.0
CPT0194790003	Tumor	-1.0
C3N-01620-05	Normal	-1.0
CPT0162990004	Tumor	-1.0
CPT0190850003	Tumor	-1.0
CPT0256560003	Tumor	-1.0
CPT0084650004	Normal	-1.0
CPT0177710003	Tumor	-1.0
C3N-01859-04	Normal	-1.1
CPT0169920003	Normal	-1.1
CPT0245060004	Tumor	-1.1
CPT0236870003	Normal	-1.1
CPT0236640003	Normal	-1.1
C3N-02693-06	Normal	-1.1
CPT0245680003	Tumor	-1.1
CPT0250310003	Tumor	-1.1
CPT0177010003	Tumor	-1.1
CPT0094350004	Tumor	-1.1
CPT0245450003	Tumor	-1.1
CPT0237500003	Normal	-1.1
CPT0229220002	Normal	-1.1
C3N-04275-05	Normal	-1.1
CPT0261520003	Tumor	-1.2
CPT0127050003	Tumor	-1.2
CPT0194250003	Tumor	-1.2
CPT0194260003	Normal	-1.2
CPT0088060004	Tumor	-1.2
CPT0243090003	Tumor	-1.2
CPT0190860003	Normal	-1.2
CPT0246540003	Tumor	-1.3
CPT0237150003	Normal	-1.3
CPT0223460003	Normal	-1.3
CPT0226090003	Normal	-1.3
CPT0163240003	Tumor	-1.3
CPT0199830003	Normal	-1.3
CPT0201860004	Normal	-1.3
CPT0013030003	Normal	-1.4
CPT0245560003	Normal	-1.4
CPT0088010003	Normal	-1.4
CPT0281470002	Normal	-1.4
C3N-04276-06	Normal	-1.4
CPT0011320003	Normal	-1.4
CPT0008960003	Normal	-1.4
CPT0163490003	Normal	-1.4
CPT0226350003	Normal	-1.4
CPT0235470002	Normal	-1.4
CPT0094490004	Tumor	-1.4
CPT0123190003	Normal	-1.5
CPT0088430003	Normal	-1.5
C3N-01758-04	Normal	-1.5
CPT0245130003	Tumor	-1.5
CPT0199710003	Normal	-1.5
CPT0088080003	Normal	-1.5
CPT0245460003	Normal	-1.5
CPT0245410003	Normal	-1.5
CPT0245020003	Normal	-1.5
CPT0226450003	Normal	-1.6
CPT0199890003	Normal	-1.6
CPT0163160003	Tumor	-1.6
CPT0248350003	Normal	-1.6
CPT0237620004	Tumor	-1.6
CPT0196060003	Normal	-1.6
CPT0242000004	Normal	-1.6
CPT0245140003	Normal	-1.6
CPT0278700002	Normal	-1.7
CPT0222200003	Normal	-1.7
CPT0237480004	Tumor	-1.7
CPT0245230004	Tumor	-1.7
CPT0163610003	Normal	-1.7
CPT0163170003	Normal	-1.8
CPT0162890003	Tumor	-1.9
CPT0226270003	Normal	-1.9
CPT0169740004	Normal	-1.9
CPT0163250003	Normal	-2.0
CPT0163860003	Normal	-2.1
CPT0163020003	Normal	-2.1
CPT0094580003	Normal	-2.3
CPT0237640003	Normal	-2.4
C3N-00857-05	Normal	-2.4
CPT0229230003	Normal	N/A
CPT0169750003	Normal	N/A
CPT0229210003	Tumor	N/A
CPT0229190003	Tumor	N/A
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HEAD AND NECK CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA004627
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Squamous cell carcinoma, NOS
Neoplasm, malignant, NOS
Carcinoma, NOS
Adenocarcinoma, NOS