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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
423.8
nTPM
GTEx:
423.8
nTPM
FANTOM5:
33.3
Scaled Tags Per Million
Pig:
357.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
423.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 423.8
Samples: 105
Max nTPM: 591.9
Min nTPM: 314.6
Std nTPM: 58.1
Median nTPM:
126_1
63 years, male
591.9
137_1
83 years, male
582.8
162_1
79 years, female
554.8
42_1
85 years, male
552.5
218_1
71 years, female
545.6
117_1
61 years, male
541.2
145_1
84 years, male
539.5
17_1
71 years, male
534.3
35_1
74 years, female
521.0
315_1
62 years, female
515.5
265_1
87 years, male
502.1
386_1
76 years, male
501.5
495_1
57 years, female
501.0
163_1
78 years, male
490.1
384_1
83 years, male
482.3
518_1
75 years, female
482.3
4_1
88 years, female
480.2
6_1
73 years, female
477.6
237_1
82 years, male
473.4
353_1
82 years, female
471.9
109_1
81 years, female
464.2
499_1
55 years, female
464.2
2_1
77 years, female
459.3
377_1
82 years, female
453.2
379_1
60 years, male
452.0
375_1
74 years, female
451.5
115_1
83 years, male
449.7
173_1
67 years, male
447.3
18_1
88 years, male
447.0
308_1
70 years, female
446.6
99_1
64 years, male
441.9
43_1
64 years, female
441.2
319_1
81 years, male
440.2
311_1
78 years, male
438.2
89_1
63 years, male
437.1
266_1
85 years, male
436.9
415_1
77 years, female
436.0
149_1
88 years, male
435.6
293_1
68 years, female
434.2
526_1
61 years, male
432.2
356_1
87 years, female
431.0
120_1
70 years, female
430.0
9_1
66 years, female
428.0
351_1
91 years, male
426.6
491_1
89 years, female
426.4
350_1
84 years, female
425.8
490_1
67 years, female
422.0
447_1
81 years, male
421.7
468_1
89 years, male
421.6
503_1
68 years, male
418.9
317_1
60 years, male
418.3
394_1
75 years, female
416.6
142_1
61 years, female
416.5
355_1
70 years, female
416.4
354_1
81 years, female
416.2
466_1
57 years, female
414.9
452_1
88 years, female
414.3
246_1
77 years, male
414.1
396_1
62 years, male
413.8
119_1
70 years, female
412.0
501_1
88 years, male
411.9
139_1
64 years, female
411.3
517_1
88 years, male
406.7
314_1
67 years, male
406.6
335_1
73 years, female
405.6
177_1
74 years, male
402.5
243_1
75 years, male
402.2
32_1
67 years, male
400.2
189_1
76 years, male
400.1
322_1
76 years, male
399.7
254_1
77 years, female
399.3
292_1
71 years, male
394.6
313_1
79 years, female
393.9
251_1
78 years, male
391.1
288_1
66 years, female
391.0
376_1
75 years, female
388.7
307_1
66 years, female
388.5
349_1
83 years, male
388.3
81_1
67 years, male
386.5
153_1
70 years, female
385.6
291_1
76 years, male
384.0
217_1
76 years, male
383.5
389_1
86 years, female
383.5
41_1
94 years, female
383.1
347_1
72 years, male
377.1
404_1
82 years, female
372.7
264_1
73 years, female
371.5
286_1
68 years, female
370.1
172_1
72 years, female
369.9
321_1
62 years, female
367.6
506_1
65 years, male
363.9
295_1
61 years, female
363.0
316_1
62 years, male
362.1
324_1
76 years, male
360.5
348_1
84 years, male
359.0
414_1
84 years, female
349.7
320_1
89 years, female
348.2
318_1
68 years, male
339.2
352_1
62 years, male
337.1
229_1
69 years, female
333.5
425_1
59 years, female
325.0
480_1
63 years, male
324.1
405_1
91 years, male
323.0
406_1
79 years, male
318.8
413_1
59 years, female
314.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.