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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
873.5
nTPM
FANTOM5:
51.7
Scaled Tags Per Million
Pig:
597.4
nTPM
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
873.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 840.1
2301
Female, age 85, both hemispheres
1150.2
2188
Female, age 91, both hemispheres
856.5
2090
Male, age 80, both hemispheres
843.7
1984
Male, age 76, both hemispheres
509.9
Dorsal cochlear nucleus nTPM: 735.2
2187
Female, age 91, both hemispheres
836.9
2802
Male, age 74, right hemisphere
791.4
2378
Male, age 80, both hemispheres
743.5
2058
Male, age 76, both hemispheres
682.2
2370
Male, age 61, both hemispheres
621.7
Dorsal tegmental nucleus nTPM: 873.5
2358
Male, age 61, both hemispheres
1189.8
2083
Male, age 80, both hemispheres
866.3
2326
Male, age 74, both hemispheres
790.7
1936
Male, age 76, left hemisphere
647.3
Dorsolateral tegmental area nTPM: 701.1
2337
Male, age 61, both hemispheres
851.8
2751
Female, age 85, both hemispheres
753.7
2654
Male, age 80, both hemispheres
748.5
2141
Male, age 76, both hemispheres
600.1
2360
Male, age 74, both hemispheres
551.6
Kolliker-Fuse nucleus nTPM: 865.6
2793
Female, age 91, left hemisphere
1041.1
2315
Male, age 76, right hemisphere
795.6
2163
Male, age 80, both hemispheres
760.0
Lateral lemniscal nuclei nTPM: 682.1
2320
Female, age 91, left hemisphere
824.5
2453
Male, age 74, right hemisphere
776.7
2746
Female, age 85, left hemisphere
722.4
2169
Male, age 76, both hemispheres
631.3
2036
Male, age 80, both hemispheres
455.7
Lateral parabrachial nucleus nTPM: 749.0
2792
Male, age 76, both hemispheres
1036.0
2013
Male, age 80, both hemispheres
807.4
2139
Female, age 85, right hemisphere
632.3
2790
Male, age 61, both hemispheres
520.3
Lateral vestibular nucleus nTPM: 807.7
2311
Male, age 80, both hemispheres
937.1
2184
Male, age 76, both hemispheres
678.2
Locus coeruleus nTPM: 522.2
2720
Male, age 74, both hemispheres
713.5
2162
Male, age 80, both hemispheres
573.0
2123
Female, age 91, both hemispheres
508.6
2317
Female, age 72, unknown
471.6
2788
Male, age 74, unknown
470.3
1980
Male, age 76, both hemispheres
465.7
2014
Male, age 55, unknown
452.5
Medial parabrachial nucleus nTPM: 732.8
2854
Male, age 80, both hemispheres
841.1
2170
Female, age 91, both hemispheres
799.6
2786
Male, age 76, both hemispheres
701.6
2156
Male, age 61, both hemispheres
687.3
2463
Female, age 85, right hemisphere
634.3
Medial periolivary nuclei nTPM: 672.3
2458
Female, age 91, both hemispheres
836.6
2081
Male, age 80, both hemispheres
833.7
2063
Male, age 76, both hemispheres
587.4
2791
Male, age 74, right hemisphere
569.4
2171
Female, age 85, both hemispheres
534.2
Motor facial nucleus nTPM: 754.7
2697
Female, age 85, both hemispheres
952.8
2327
Male, age 80, both hemispheres
770.4
2365
Male, age 74, right hemisphere
758.9
2126
Male, age 61, both hemispheres
758.8
2795
Female, age 91, both hemispheres
745.5
2062
Male, age 76, both hemispheres
541.7
Motor trigeminal nucleus nTPM: 740.0
2321
Female, age 91, both hemispheres
888.9
2335
Male, age 61, both hemispheres
807.0
2309
Male, age 76, both hemispheres
711.1
2079
Male, age 80, both hemispheres
701.3
2560
Male, age 74, both hemispheres
591.9
Nuclei of the trapezoid body nTPM: 613.4
2166
Male, age 80, both hemispheres
712.2
1983
Male, age 76, both hemispheres
664.5
2368
Female, age 91, both hemispheres
660.8
2159
Male, age 61, both hemispheres
589.0
2735
Female, age 85, both hemispheres
440.5
Nucleus raphe magnus nTPM: 684.2
2328
Male, age 80, both hemispheres
816.6
2459
Female, age 91, both hemispheres
789.0
2051
Male, age 76, both hemispheres
738.6
2455
Male, age 74, both hemispheres
709.5
2172
Female, age 85, both hemispheres
559.3
2160
Male, age 61, both hemispheres
491.9
Paramedian reticular nucleus nTPM: 681.1
2052
Male, age 76, both hemispheres
729.9
2313
Male, age 61, both hemispheres
701.2
2057
Male, age 80, both hemispheres
666.4
2050
Female, age 85, both hemispheres
626.8
Pedunculopontine tegmental nucleus nTPM: 787.1
2338
Male, age 61, both hemispheres
915.1
2334
Male, age 80, both hemispheres
870.9
1921
Female, age 85, both hemispheres
575.3
Pontine nuclei nTPM: 665.1
2319
Female, age 91, both hemispheres
875.8
2454
Male, age 74, left hemisphere
781.8
2115
Male, age 80, left hemisphere
711.0
1968
Male, age 76, left hemisphere
666.4
2109
Female, age 72, unknown
629.6
1863
Male, age 55, unknown
610.7
2787
Female, age 85, both hemispheres
541.3
2727
Male, age 61, right hemisphere
504.5
Pontine raphe nucleus nTPM: 587.2
2122
Female, age 85, midline
592.1
2853
Male, age 76, midline
582.3
Posteroventral cochlear nucleus nTPM: 808.3
2341
Male, age 80, both hemispheres
983.7
2135
Female, age 91, both hemispheres
926.9
2070
Male, age 76, both hemispheres
778.9
2371
Male, age 61, both hemispheres
727.0
2752
Female, age 85, both hemispheres
624.9
Principal sensory trigeminal nucleus nTPM: 699.8
2367
Female, age 91, left hemisphere
981.0
2324
Male, age 76, both hemispheres
826.4
2158
Male, age 61, both hemispheres
496.6
2008
Male, age 80, left hemisphere
495.2
Reticular pontine nucleus, caudal nTPM: 764.6
2457
Female, age 91, both hemispheres
912.6
2332
Male, age 80, right hemisphere
770.6
2559
Male, age 74, both hemispheres
692.7
2092
Male, age 76, both hemispheres
682.3
Reticular pontine nucleus, oral nTPM: 759.6
2366
Female, age 91, both hemispheres
1037.8
1939
Male, age 80, both hemispheres
776.0
2167
Male, age 76, both hemispheres
758.6
2361
Male, age 74, both hemispheres
618.8
2012
Female, age 85, both hemispheres
606.9
Reticulotegmental nucleus nTPM: 855.7
2322
Female, age 91, both hemispheres
1093.4
2333
Male, age 80, both hemispheres
900.9
2452
Male, age 74, both hemispheres
812.3
2325
Male, age 76, both hemispheres
616.2
Spinal trigeminal nucleus, oral nTPM: 692.7
2164
Male, age 80, both hemispheres
844.9
1978
Male, age 76, both hemispheres
643.6
2737
Female, age 85, both hemispheres
589.6
Subcoeruleus area nTPM: 713.4
2369
Female, age 85, left hemisphere
826.5
2323
Female, age 91, left hemisphere
799.2
1958
Male, age 80, both hemispheres
682.2
2451
Male, age 74, both hemispheres
652.9
2089
Male, age 76, left hemisphere
606.0
Superior olive nTPM: 667.9
2329
Male, age 80, right hemisphere
779.5
2561
Female, age 91, both hemispheres
731.3
2020
Male, age 76, both hemispheres
708.2
2364
Male, age 74, right hemisphere
591.2
1875
Female, age 85, both hemispheres
529.7
Ventral periolivary nuclei nTPM: 654.1
2023
Male, age 76, both hemispheres
762.9
2165
Male, age 80, both hemispheres
670.9
2794
Female, age 91, left hemisphere
647.1
2130
Female, age 85, both hemispheres
535.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 726.2
2840
Female, age 85, both hemispheres
867.0
2161
Male, age 80, both hemispheres
784.7
2456
Female, age 91, both hemispheres
740.1
2449
Male, age 74, both hemispheres
719.7
1959
Male, age 76, both hemispheres
650.6
2359
Male, age 61, both hemispheres
595.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
