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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COL4A1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
77.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
706.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
226.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
180.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
164.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
139.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
134.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
124.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
118.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
109.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
102.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
101.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
101.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
98.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
96.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
96.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
92.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
88.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
86.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
83.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
81.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
80.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
79.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
79.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
77.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
75.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
75.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
74.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
71.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
69.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
62.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
61.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
60.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
59.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
58.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
56.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
55.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
53.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
50.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
50.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
48.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
44.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
44.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
44.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
43.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
42.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
40.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
39.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
39.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
35.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
32.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
31.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
27.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
27.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
27.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
27.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
25.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
25.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
23.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
23.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
18.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
15.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
12.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COL4A1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
328.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
1616.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
1416.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
1363.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
1319.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
1229.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
1225.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
1191.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
1163.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
1159.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
1152.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
1122.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
1108.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
1092.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
1085.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1059.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
1016.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
972.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
955.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
926.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
924.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
914.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
911.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
902.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
896.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
877.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
845.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
838.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
834.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
805.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
785.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
775.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
768.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
750.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
744.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
742.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
736.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
730.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
728.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
719.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
693.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
688.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
667.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
653.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
651.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
645.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
637.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
636.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
633.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
628.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
622.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
616.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
615.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
615.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
615.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
614.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
611.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
609.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
608.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
608.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
607.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
606.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
600.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
596.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
589.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
587.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
583.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
582.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
579.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
576.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
575.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
573.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
563.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
562.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
562.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
561.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
556.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
551.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
551.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
543.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
541.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
540.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
533.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
531.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
529.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
516.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
516.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
515.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
515.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
503.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
501.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
495.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
488.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
486.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
485.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
481.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
476.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
474.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
472.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
469.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
464.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
456.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
456.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
454.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
453.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
451.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
449.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
447.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
446.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
444.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
443.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
441.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
440.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
440.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
434.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
433.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
432.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
432.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
432.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
431.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
429.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
425.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
425.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
423.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
423.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
420.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
420.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
418.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
417.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
416.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
414.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
413.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
412.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
412.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
412.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
412.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
411.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
411.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
411.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
410.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
409.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
407.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
406.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
406.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
406.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
405.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
402.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
400.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
398.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
397.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
397.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
396.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
391.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
389.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
389.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
388.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
387.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
385.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
384.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
384.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
380.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
380.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
377.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
376.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
376.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
375.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
374.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
372.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
372.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
372.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
372.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
370.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
369.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
369.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
369.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
367.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
367.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
365.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
363.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
359.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
358.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
357.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
356.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
355.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
355.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
354.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
354.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
354.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
354.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
351.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
351.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
350.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
349.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
348.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
343.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
342.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
342.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
340.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
339.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
338.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
337.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
337.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
336.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
335.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
334.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
334.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
329.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
329.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
329.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
329.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
328.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
327.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
327.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
327.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
326.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
326.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
325.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
324.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
321.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
321.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
320.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
317.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
317.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
316.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
316.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
316.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
315.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
315.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
314.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
314.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
313.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
308.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
308.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
307.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
306.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
306.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
305.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
305.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
304.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
303.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
303.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
301.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
300.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
298.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
298.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
297.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
297.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
296.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
295.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
294.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
292.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
287.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
287.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
281.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
280.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
280.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
280.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
280.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
279.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
277.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
277.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
277.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
275.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
274.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
273.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
272.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
272.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
272.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
269.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
266.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
265.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
264.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
263.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
262.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
261.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
260.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
256.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
256.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
256.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
256.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
256.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
256.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
253.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
253.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
253.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
252.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
251.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
251.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
246.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
245.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
244.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
244.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
244.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
244.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
243.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
243.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
241.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
241.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
241.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
240.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
239.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
237.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
237.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
236.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
235.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
234.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
232.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
232.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
231.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
231.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
230.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
229.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
223.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
222.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
222.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
222.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
221.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
218.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
218.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
217.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
215.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
214.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
214.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
213.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
213.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
212.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
212.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
211.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
211.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
209.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
207.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
207.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
203.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
201.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
200.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
200.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
199.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
198.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
198.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
198.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
198.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
197.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
196.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
196.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
195.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
194.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
194.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
193.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
193.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
193.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
192.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
190.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
190.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
188.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
185.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
181.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
181.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
181.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
178.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
178.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
177.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
177.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
177.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
177.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
177.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
177.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
176.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
176.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
175.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
174.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
172.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
172.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
171.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
168.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
166.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
166.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
166.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
165.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
165.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
165.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
165.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
164.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
164.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
163.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
162.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
161.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
160.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
158.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
157.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
157.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
156.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
156.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
152.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
149.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
149.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
148.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
148.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
146.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
146.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
146.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
145.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
145.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
145.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
144.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
142.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
140.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
140.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
138.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
138.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
138.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
137.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
137.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
135.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
134.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
134.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
133.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
132.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
130.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
130.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
130.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
130.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
129.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
127.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
126.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
126.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
125.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
125.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
125.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
124.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
123.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
122.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
122.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
122.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
121.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
120.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
120.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
119.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
118.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
117.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
114.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
114.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
113.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
112.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
112.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
111.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
110.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
109.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
107.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
105.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
104.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
104.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
103.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
103.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
103.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
102.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
101.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
101.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
100.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
99.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
98.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
97.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
95.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
94.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
90.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
89.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
88.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
86.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
86.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
86.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
83.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
82.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
81.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
81.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
80.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
80.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
79.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
78.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
77.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
77.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
76.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
74.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
74.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
73.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
69.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
64.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
63.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
59.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
59.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
59.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
58.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
57.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
56.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
56.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
55.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
54.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
54.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
51.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
51.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
50.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
46.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
42.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
42.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
41.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
40.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
40.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
40.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
37.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
36.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
35.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
33.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
30.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
29.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
27.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
27.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
22.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
21.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
19.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
14.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
14.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
11.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COL4A1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
252.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
1425.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
1397.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
1003.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
711.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
698.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
495.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
463.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
455.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
439.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
425.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
403.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
363.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
360.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
357.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
353.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
353.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
342.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
337.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
336.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
329.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
323.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
322.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
318.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
317.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
317.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
309.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
308.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
305.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
297.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
288.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
283.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
276.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
261.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
245.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
238.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
237.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
237.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
232.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
230.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
230.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
229.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
226.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
224.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
223.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
218.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
218.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
216.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
216.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
212.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
210.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
208.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
207.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
203.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
202.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
198.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
197.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
179.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
179.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
177.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
170.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
169.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
167.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
158.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
156.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
156.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
154.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
154.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
150.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
149.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
148.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
148.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
147.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
146.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
143.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
135.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
134.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
132.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
132.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
132.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
125.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
124.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
123.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
115.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
114.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
111.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
108.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
104.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
102.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
91.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
91.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
65.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
58.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
55.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
47.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
46.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
45.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
42.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
37.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
30.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COL4A1 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
415.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
376.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
335.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
303.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
284.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
278.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
266.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
252.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
243.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
240.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
230.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
212.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
199.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
180.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
171.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
165.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
147.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
139.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
137.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
129.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
120.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
116.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
113.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
110.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
108.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
101.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
100.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
99.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
96.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
95.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
92.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
91.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
90.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
89.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
88.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
88.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
83.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
83.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
82.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
80.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
80.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
80.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
79.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
78.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
78.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
78.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
77.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
77.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
76.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
76.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
75.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
74.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
72.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
71.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
71.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
70.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
69.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
69.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
69.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
68.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
68.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
67.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
66.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
65.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
64.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
64.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
63.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
63.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
63.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
62.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
62.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
61.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
60.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
59.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
59.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
59.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
58.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
58.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
58.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
58.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
57.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
57.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
57.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
57.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
57.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
55.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
55.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
55.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
54.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
54.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
54.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
52.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
51.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
51.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
49.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
49.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
49.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
49.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
49.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
49.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
49.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
49.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
48.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
46.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
45.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
45.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
45.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
45.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
45.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
45.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
44.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
44.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
43.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
43.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
43.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
43.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
42.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
42.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
41.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
40.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
40.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
40.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
40.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
40.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
40.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
39.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
39.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
39.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
39.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
38.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
37.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
36.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
36.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
36.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
36.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
36.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
36.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
36.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
35.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
35.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
35.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
35.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
34.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
34.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
34.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
34.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
33.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
33.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
33.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
32.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
32.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
32.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
32.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
31.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
31.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
31.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
30.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
30.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
30.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
30.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
30.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
29.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
29.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
29.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
29.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
29.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
28.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
28.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
28.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
28.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
28.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
28.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
28.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
28.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
28.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
27.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
27.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
27.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
27.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
27.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
27.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
27.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
26.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
26.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
26.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
26.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
26.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
26.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
26.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
25.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
25.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
25.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
25.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
24.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
24.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
24.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
24.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
23.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
23.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
23.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
23.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
22.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
22.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
22.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
22.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
22.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
22.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
21.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
21.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
21.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
21.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
21.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
20.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
20.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
19.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
19.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
19.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
18.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
18.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
18.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
17.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
17.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
17.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
17.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
16.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
16.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
16.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
15.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
15.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
15.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
14.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
13.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
13.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
12.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
12.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
11.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
10.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
10.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
9.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
7.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
7.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
1.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012290003
Normal
1.3
CPT0012570003
Normal
1.2
CPT0025060001
Normal
1.1
CPT0024680001
Normal
1.1
CPT0010120001
Normal
1.1
CPT0077320001
Normal
1.0
CPT0000890001
Normal
1.0
CPT0076350001
Normal
0.9
CPT0012920003
Normal
0.9
CPT0064400001
Normal
0.9
CPT0077140001
Normal
0.8
CPT0025920001
Normal
0.8
CPT0014470001
Normal
0.8
CPT0077500001
Normal
0.7
CPT0088500001
Normal
0.7
CPT0009020003
Normal
0.7
CPT0012090003
Normal
0.6
CPT0026420001
Normal
0.6
CPT0009080003
Normal
0.6
CPT0069010001
Normal
0.6
CPT0092310003
Normal
0.6
CPT0075570001
Normal
0.6
CPT0006730001
Normal
0.6
CPT0063640001
Normal
0.5
CPT0088710001
Normal
0.5
CPT0065820001
Normal
0.5
CPT0002370001
Normal
0.5
CPT0025610001
Normal
0.5
CPT0006950001
Normal
0.5
CPT0020130001
Normal
0.5
CPT0013790003
Normal
0.5
CPT0012770003
Normal
0.5
CPT0066520001
Normal
0.5
CPT0065450001
Normal
0.5
CPT0079510001
Normal
0.4
CPT0000790001
Normal
0.4
CPT0092190003
Normal
0.4
CPT0012640003
Normal
0.4
CPT0000660001
Normal
0.4
CPT0020020001
Normal
0.4
CPT0023710001
Normal
0.4
CPT0078530001
Normal
0.4
CPT0007870001
Normal
0.4
CPT0018250001
Normal
0.3
CPT0089040001
Normal
0.3
CPT0079300001
Normal
0.3
CPT0087050003
Normal
0.3
CPT0006530001
Normal
0.3
CPT0001510001
Normal
0.3
CPT0001350001
Normal
0.3
CPT0078840001
Normal
0.3
CPT0081620001
Normal
0.3
CPT0088570001
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0019160001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0001190001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0001230001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0082010001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0079430001
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0001550001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0015910003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0014160003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0088640003
Normal
-0.2
CPT0092290003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0085670003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0012900004
Tumor
-0.3
CPT0089480003
Normal
-0.3
CPT0019990003
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0088630003
Tumor
-0.4
CPT0076330003
Tumor
-0.4
CPT0089020003
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0081990003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0009000003
Tumor
-0.4
CPT0025580004
Tumor
-0.5
CPT0006900003
Tumor
-0.5
CPT0071150004
Tumor
-0.5
CPT0088970003
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0000640003
Tumor
-0.5
CPT0014370004
Tumor
-0.5
CPT0001540009
Tumor
-0.5
CPT0087040003
Tumor
-0.5
CPT0077490003
Tumor
-0.5
CPT0020120003
Tumor
-0.5
CPT0065810003
Tumor
-0.5
CPT0069160003
Tumor
-0.5
CPT0086870003
Tumor
-0.5
CPT0081600003
Tumor
-0.5
CPT0079480003
Tumor
-0.5
CPT0001220008
Tumor
-0.5
CPT0025170003
Tumor
-0.6
CPT0078930003
Tumor
-0.6
CPT0065430003
Tumor
-0.6
CPT0026410003
Tumor
-0.6
CPT0086360003
Tumor
-0.6
CPT0075560003
Tumor
-0.6
CPT0025050003
Tumor
-0.6
CPT0006440003
Tumor
-0.6
CPT0006630003
Tumor
-0.6
CPT0025880003
Tumor
-0.6
CPT0010160003
Tumor
-0.6
CPT0075130003
Tumor
-0.6
CPT0077110003
Tumor
-0.6
CPT0012670003
Tumor
-0.6
CPT0077310003
Tumor
-0.6
CPT0023690003
Tumor
-0.6
CPT0088480003
Tumor
-0.7
CPT0021240003
Tumor
-0.7
CPT0088900003
Tumor
-0.7
CPT0088690003
Tumor
-0.7
CPT0092160003
Tumor
-0.7
CPT0065690003
Tumor
-0.8
CPT0012370003
Tumor
-0.8
CPT0002270011
Tumor
-0.8
CPT0086950003
Tumor
-0.8
CPT0017410003
Tumor
-0.8
CPT0012550003
Tumor
-0.8
CPT0000870016
Tumor
-0.8
CPT0063630003
Tumor
-0.8
CPT0079230003
Tumor
-0.8
CPT0012080003
Tumor
-0.8
CPT0078830003
Tumor
-0.8
CPT0002350011
Tumor
-0.8
CPT0065930003
Tumor
-0.9
CPT0079270003
Tumor
-0.9
CPT0086820003
Tumor
-0.9
CPT0007320003
Tumor
-0.9
CPT0019130003
Tumor
-0.9
CPT0012180003
Tumor
-0.9
CPT0025110003
Tumor
-0.9
CPT0001260009
Tumor
-0.9
CPT0012280003
Tumor
-1.0
CPT0014450004
Tumor
-1.0
CPT0078800003
Tumor
-1.0
CPT0009060003
Tumor
-1.0
CPT0015810003
Tumor
-1.0
CPT0086030003
Tumor
-1.0
CPT0025230003
Tumor
-1.0
CPT0025290003
Tumor
-1.0
CPT0001180009
Tumor
-1.0
CPT0023350003
Tumor
-1.0
CPT0079180003
Tumor
-1.0
CPT0078990003
Tumor
-1.1
CPT0025350003
Tumor
-1.1
CPT0079410003
Tumor
-1.1
CPT0010110003
Tumor
-1.1
CPT0001340003
Tumor
-1.1
CPT0024670003
Tumor
-1.1
CPT0065750003
Tumor
-1.1
CPT0078660003
Tumor
-1.1
CPT0088550004
Tumor
-1.2
CPT0081880003
Tumor
-1.4
CPT0015730003
Tumor
-1.7
CPT0079380003
Tumor
-1.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
