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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
68.2
nTPM
HPA Brain:
148.3
nTPM
GTEx:
68.2
nTPM
FANTOM5:
378.6
Scaled Tags Per Million
Pig:
154.0
nTPM
Mouse:
164.4
nTPM
Allen mouse:
16.8
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
148.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 123.3
2219
Male, age 76, both hemispheres
171.4
2666
Male, age 74, left hemisphere
144.0
1827
Male, age 72, unknown
127.4
1870
Female, age 42, unknown
126.1
2828
Female, age 72, unknown
125.9
2586
Male, age 75, left hemisphere
120.8
1833
Male, age 53, unknown
110.9
2411
Female, age 72, unknown
104.7
2019
Male, age 18, unknown
101.3
1830
Male, age 51, unknown
101.0
Dorsal raphe nucleus nTPM: 125.0
2298
Female, age 72, unknown
149.1
2047
Male, age 72, unknown
138.3
2750
Male, age 76, both hemispheres
137.8
1828
Male, age 53, unknown
105.7
2016
Female, age 72, unknown
93.9
Inferior colliculus nTPM: 113.4
2849
Male, age 72, unknown
130.0
1848
Female, age 42, unknown
119.9
2097
Female, age 72, unknown
115.7
1890
Male, age 53, unknown
88.1
Median raphe nucleus nTPM: 148.3
2220
Male, age 76, midline
148.3
Periaquaductal grey, anterior nTPM: 135.5
1947
Male, age 18, unknown
139.8
1795
Male, age 51, unknown
134.4
2502
Female, age 75, unknown
132.2
Periaquaductal grey, dorsal nTPM: 101.7
1840
Male, age 53, unknown
123.6
2850
Male, age 76, both hemispheres
119.7
1831
Male, age 72, unknown
98.5
2464
Female, age 72, unknown
65.1
Periaquaductal grey, lateral nTPM: 102.9
2053
Male, age 18, unknown
112.4
2140
Male, age 76, both hemispheres
106.0
2272
Male, age 74, both hemispheres
90.4
Pretectal area nTPM: 132.6
1944
Female, age 72, unknown
168.4
1816
Male, age 51, unknown
160.1
2224
Female, age 72, unknown
156.1
2007
Male, age 72, unknown
148.1
1817
Female, age 42, unknown
144.3
1815
Male, age 53, unknown
140.1
2825
Male, age 18, unknown
127.0
2667
Female, age 75, unknown
118.7
2407
Male, age 75, both hemispheres
108.9
2316
Male, age 76, right hemisphere
95.8
2273
Male, age 74, both hemispheres
90.8
Red nucleus nTPM: 103.3
2725
Female, age 75, unknown
133.9
2588
Male, age 74, left hemisphere
125.5
2584
Male, age 75, left hemisphere
110.7
2785
Male, age 18, unknown
106.6
2823
Male, age 76, right hemisphere
104.5
1904
Male, age 53, unknown
98.3
1821
Female, age 72, unknown
96.5
2503
Female, age 72, unknown
93.9
2227
Male, age 72, unknown
93.7
1865
Male, age 51, unknown
92.4
1954
Female, age 42, unknown
92.3
2769
Male, age 72, unknown
91.8
Substantia nigra nTPM: 134.2
1916
Female, age 42, unknown
168.6
1941
Male, age 53, unknown
156.1
1889
Female, age 72, unknown
153.9
1851
Male, age 51, unknown
147.2
2409
Female, age 72, unknown
133.8
2665
Male, age 74, both hemispheres
131.0
2241
Male, age 72, unknown
128.8
2699
Male, age 18, unknown
119.1
2590
Female, age 75, unknown
109.6
2583
Male, age 75, right hemisphere
93.9
Superior colliculus nTPM: 122.9
2087
Female, age 72, unknown
151.4
2261
Male, age 18, unknown
142.0
1796
Male, age 53, unknown
131.7
1895
Male, age 76, right hemisphere
127.3
2668
Female, age 75, unknown
126.7
1839
Male, age 51, unknown
118.4
2664
Male, age 75, both hemispheres
113.5
1913
Female, age 42, unknown
111.9
2587
Male, age 74, left hemisphere
107.1
1995
Male, age 72, unknown
99.1
Ventral tegmental area nTPM: 123.5
1915
Female, age 42, unknown
138.7
2218
Male, age 76, both hemispheres
136.9
1942
Male, age 51, unknown
124.6
2021
Male, age 53, unknown
121.5
2223
Female, age 72, unknown
117.3
2410
Female, age 72, unknown
101.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
68.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 68.2
Samples: 139
Max nTPM: 136.8
Min nTPM: 27.8
Std nTPM: 19.3
Median nTPM: 64.7
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
136.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
119.8
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
119.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
109.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
108.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
107.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
105.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
104.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
103.6
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
102.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
101.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
100.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
100.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
93.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
91.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
91.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
90.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
89.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
88.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
87.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
86.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
86.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
86.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
85.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
84.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
83.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
83.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
83.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
83.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
82.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
82.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
82.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
82.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
81.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
80.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
80.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
80.5
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
80.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
79.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
79.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
79.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
76.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
76.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
76.0
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
75.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
75.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
75.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
75.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
74.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
74.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
74.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
74.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
74.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
73.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
72.4
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
72.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
72.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
71.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
71.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
71.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
69.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
69.0
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
68.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
67.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
67.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
66.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
65.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
65.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
64.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
64.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
63.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
63.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
62.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
62.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
61.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
61.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
60.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
60.8
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
60.8
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
60.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
60.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
60.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
59.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
58.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
58.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
58.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
58.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
58.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
57.8
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
57.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
57.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
57.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
56.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
56.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
56.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
55.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
55.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
55.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
55.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
54.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
54.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
54.5
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
53.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
53.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
53.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
53.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
53.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
52.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
52.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
52.0
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
52.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
49.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
49.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
49.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
49.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
49.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
49.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
48.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
48.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
48.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
48.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
47.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
47.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
47.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
47.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
46.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
46.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
46.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
45.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
45.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
44.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
43.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
42.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
42.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
41.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
40.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
40.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
39.0
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
27.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
164.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 164.4
Samples: 4
Max nTPM: 169.0
Min nTPM: 160.0
Sample A
Male
160.0
Sample B
Male
162.8
Sample C
Female
165.8
Sample D
Female
169.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.