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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
87.4
nTPM
HPA Brain:
133.1
nTPM
GTEx:
87.4
nTPM
FANTOM5:
489.2
Scaled Tags Per Million
Pig:
191.2
nTPM
Mouse:
160.7
nTPM
Allen mouse:
18.9
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
133.1
Sample id
Sample description
nTPM
Amygdala nTPM: 116.0
2814
Male, age 76, right hemisphere
155.8
1987
Female, age 91, left hemisphere
128.1
2517
Female, age 94, left hemisphere
110.7
2695
Female, age 67, right hemisphere
97.0
2514
Male, age 75, right hemisphere
88.3
Basal amygdala nTPM: 127.7
2243
Female, age 91, right hemisphere
175.7
1955
Male, age 76, both hemispheres
150.5
2110
Male, age 80, left hemisphere
135.9
2685
Female, age 94, left hemisphere
128.6
2609
Male, age 75, right hemisphere
94.2
2827
Female, age 67, right hemisphere
81.4
Central amygdala nTPM: 127.6
1905
Male, age 76, both hemispheres
154.1
2239
Male, age 80, left hemisphere
152.0
2701
Female, age 91, right hemisphere
124.8
2826
Female, age 94, left hemisphere
113.6
2515
Male, age 75, right hemisphere
93.5
Corticomedial amygdala nTPM: 133.1
2829
Male, age 80, left hemisphere
154.4
2242
Female, age 91, right hemisphere
149.6
2535
Female, age 67, right hemisphere
146.8
2429
Female, age 94, left hemisphere
135.3
2240
Male, age 76, both hemispheres
128.9
2428
Male, age 75, right hemisphere
83.8
Lateral amygdala nTPM: 111.4
2534
Female, age 94, left hemisphere
154.1
1883
Male, age 76, both hemispheres
142.7
2255
Female, age 91, right hemisphere
110.1
2516
Male, age 75, right hemisphere
101.7
2256
Male, age 80, left hemisphere
95.5
2830
Female, age 67, right hemisphere
64.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
87.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 87.4
Samples: 152
Max nTPM: 168.6
Min nTPM: 4.0
Std nTPM: 26.9
Median nTPM: 85.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
168.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
158.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
149.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
139.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
138.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
137.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
137.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
133.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
133.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
132.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
130.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
128.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
126.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
125.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
124.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
124.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
123.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
122.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
121.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
120.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
119.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
119.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
117.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
117.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
115.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
114.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
113.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
112.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
112.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
111.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
110.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
107.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
107.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
107.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
106.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
104.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
103.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
102.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
102.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
102.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
102.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
101.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
101.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
100.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
100.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
100.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
100.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
100.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
98.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
97.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
95.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
95.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
95.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
94.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
94.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
94.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
93.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
93.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
92.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
92.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
92.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
91.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
90.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
90.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
90.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
89.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
89.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
88.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
88.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
88.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
87.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
87.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
86.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
86.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
86.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
86.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
85.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
84.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
84.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
84.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
83.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
82.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
82.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
82.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
82.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
82.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
81.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
81.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
80.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
80.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
79.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
79.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
78.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
78.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
77.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
77.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
76.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
76.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
76.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
76.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
76.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
75.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
74.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
74.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
73.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
72.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
72.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
72.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
72.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
71.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
71.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
71.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
70.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
69.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
69.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
69.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
68.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
68.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
67.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
65.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
65.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
63.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
63.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
63.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
63.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
63.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
62.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
62.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
62.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
61.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
60.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
59.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
58.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
58.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
57.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
55.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
54.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
54.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
53.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
52.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
52.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
51.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
48.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
48.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
46.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
44.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
42.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
39.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
38.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
38.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
26.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
4.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
160.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 160.7
Samples: 4
Max nTPM: 162.8
Min nTPM: 158.0
Sample A
Male
162.8
Sample B
Male
158.0
Sample C
Female
160.5
Sample D
Female
161.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.