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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
THBS2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
38.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
22.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
9.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
6.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
6.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
4.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
3.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
2.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
2.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
1.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
1.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
1.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
1.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
THBS2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
270.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
257.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
215.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
158.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
154.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
137.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
134.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
126.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
120.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
120.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
115.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
114.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
107.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
106.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
98.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
93.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
88.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
87.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
82.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
79.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
77.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
76.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
75.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
73.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
73.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
73.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
69.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
69.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
69.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
68.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
64.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
64.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
62.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
62.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
61.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
59.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
59.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
59.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
58.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
58.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
57.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
57.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
56.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
54.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
53.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
52.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
52.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
52.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
50.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
49.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
48.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
48.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
47.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
46.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
46.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
45.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
45.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
45.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
44.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
42.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
42.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
42.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
40.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
40.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
40.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
38.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
38.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
38.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
38.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
38.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
37.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
35.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
34.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
34.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
34.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
33.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
33.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
33.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
33.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
33.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
32.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
31.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
31.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
30.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
30.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
30.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
29.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
29.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
29.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
28.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
28.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
28.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
27.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
27.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
27.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
27.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
27.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
27.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
27.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
27.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
26.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
26.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
26.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
26.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
25.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
25.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
25.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
24.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
24.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
23.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
23.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
23.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
22.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
22.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
22.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
22.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
22.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
21.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
21.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
21.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
21.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
21.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
21.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
21.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
20.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
20.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
20.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
20.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
20.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
20.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
19.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
19.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
19.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
18.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
18.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
18.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
18.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
18.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
18.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
17.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
17.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
17.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
17.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
17.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
17.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
17.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
17.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
16.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
16.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
16.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
15.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
15.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
15.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
15.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
15.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
15.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
15.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
15.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
15.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
15.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
14.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
14.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
13.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
13.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
13.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
13.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
13.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
13.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
13.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
12.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
12.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
12.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
12.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
12.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
12.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
12.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
11.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
11.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
11.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
11.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
11.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
11.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
10.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
10.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
10.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
10.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
10.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
10.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
10.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
10.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
10.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
10.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
10.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
10.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
9.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
9.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
9.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
9.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
9.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
9.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
8.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
8.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
8.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
8.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
8.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
8.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
8.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
8.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
8.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
7.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
7.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
7.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
7.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
7.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
7.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
7.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
7.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
7.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
7.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
7.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
7.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
7.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
7.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
7.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
7.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
7.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
6.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
6.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
6.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
6.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
6.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
6.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
6.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
6.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
6.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
6.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
6.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
6.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
6.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
6.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
6.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
5.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
5.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
5.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
5.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
5.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
5.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
5.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
5.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
5.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
5.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
5.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
5.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
5.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
5.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
5.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
5.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
5.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
5.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
4.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
4.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
4.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
4.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
4.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
4.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
4.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
4.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
4.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
4.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
4.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
4.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
4.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
4.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
4.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
4.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
4.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
4.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
4.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
4.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
4.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
4.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
4.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
4.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
4.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
4.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
4.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
4.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
4.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
4.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
4.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
3.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
3.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
3.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
3.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
3.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
3.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
3.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
3.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
3.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
3.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
3.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
3.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
3.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
3.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
3.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
3.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
3.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
3.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
3.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
3.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
3.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
3.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
3.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
3.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
3.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
3.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
3.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
3.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
3.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
3.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
2.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
2.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
2.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
2.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
2.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
2.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
2.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
2.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
2.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
2.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
2.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
2.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
2.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
2.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
2.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
2.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
2.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
2.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
2.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
2.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
2.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
2.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
2.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
2.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
2.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
2.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
1.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
1.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
1.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
1.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
1.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
1.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
1.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
1.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
1.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
1.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
1.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
1.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
1.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
1.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
1.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
1.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
1.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
1.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
1.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
1.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
1.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
1.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
1.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
1.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
1.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
1.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
1.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
1.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
1.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
1.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
1.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
1.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
1.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
1.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
1.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
1.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
1.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
1.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
1.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
1.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
1.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
1.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
1.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
1.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
1.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
0.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
0.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
0.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
0.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
0.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
0.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
0.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
0.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
0.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
0.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
0.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
0.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
0.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
0.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
0.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
0.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
0.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
0.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
0.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
0.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
0.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
0.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
0.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
0.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
0.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
0.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
0.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
0.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
0.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
0.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
0.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
0.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
0.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
0.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
0.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
0.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
0.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
0.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
0.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
0.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
THBS2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
209.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
145.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
107.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
104.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
77.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
75.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
63.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
57.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
55.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
43.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
43.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
43.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
42.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
37.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
36.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
35.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
29.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
25.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
21.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
19.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
19.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
18.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
17.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
15.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
14.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
14.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
13.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
13.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
12.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
12.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
10.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
9.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
9.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
8.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
8.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
8.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
7.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
7.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
7.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
6.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
6.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
6.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
6.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
5.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
5.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
4.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
4.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
4.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
4.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
4.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
4.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
3.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
3.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
3.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
2.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
2.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
2.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
2.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
2.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
2.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
2.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
2.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
2.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
2.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
2.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
1.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
1.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
1.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
1.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
1.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
1.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
1.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
1.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
1.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
0.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
0.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
0.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
0.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
0.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
0.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
0.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
0.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
0.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
0.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
0.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
0.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
0.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
0.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
0.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
THBS2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
190.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
163.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
100.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
97.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
91.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
84.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
75.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
75.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
74.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
69.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
68.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
67.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
67.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
67.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
58.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
57.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
53.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
51.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
49.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
48.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
48.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
47.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
47.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
46.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
46.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
45.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
45.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
45.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
44.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
43.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
43.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
37.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
36.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
35.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
34.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
33.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
33.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
32.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
32.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
29.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
28.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
28.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
28.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
27.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
26.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
26.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
24.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
24.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
23.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
23.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
23.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
23.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
22.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
21.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
21.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
21.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
20.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
20.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
19.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
19.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
19.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
19.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
18.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
18.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
18.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
17.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
17.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
17.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
15.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
15.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
14.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
14.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
14.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
14.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
13.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
13.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
13.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
13.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
13.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
13.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
13.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
12.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
12.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
12.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
12.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
12.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
12.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
12.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
11.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
11.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
11.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
11.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
10.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
10.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
10.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
9.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
9.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
9.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
9.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
9.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
9.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
9.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
8.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
8.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
8.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
8.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
8.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
8.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
7.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
7.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
7.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
7.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
7.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
7.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
6.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
6.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
6.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
5.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
5.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
5.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
5.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
5.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
5.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
5.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
5.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
4.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
4.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
4.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
4.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
4.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
4.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
4.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
4.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
4.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
4.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
4.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
3.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
3.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
3.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
3.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
3.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
3.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
3.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
3.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
3.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
3.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
3.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
3.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
2.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
2.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
2.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
2.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
2.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
2.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
2.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
2.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
2.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
2.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
2.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
2.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
2.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
1.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
1.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
1.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
1.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
1.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
1.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
1.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
1.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
1.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
1.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
1.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
1.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
0.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
0.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
0.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
0.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
5.2
CPT0076330003
Tumor
4.6
CPT0011240003
Tumor
3.4
CPT0015910003
Tumor
3.3
CPT0066480003
Tumor
2.6
CPT0075560003
Tumor
2.2
CPT0012670003
Tumor
2.1
CPT0088630003
Tumor
2.0
CPT0065690003
Tumor
1.8
CPT0017850003
Tumor
1.8
CPT0085670003
Tumor
1.8
CPT0014160003
Tumor
1.8
CPT0081990003
Tumor
1.7
CPT0002350011
Tumor
1.7
CPT0081600003
Tumor
1.5
CPT0063630003
Tumor
1.4
CPT0025290003
Tumor
1.4
CPT0001180009
Tumor
1.3
CPT0007860003
Tumor
1.3
CPT0077310003
Tumor
1.3
CPT0092730003
Tumor
1.3
CPT0086820003
Tumor
1.2
CPT0023350003
Tumor
1.2
CPT0078510003
Tumor
1.1
CPT0021240003
Tumor
1.1
CPT0000640003
Tumor
1.0
CPT0020120003
Tumor
1.0
CPT0069160003
Tumor
0.9
CPT0019990003
Tumor
0.9
CPT0017410003
Tumor
0.8
CPT0065430003
Tumor
0.6
CPT0088690003
Tumor
0.5
CPT0001270001
Normal
0.5
CPT0069000003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0077490003
Tumor
0.5
CPT0025170003
Tumor
0.4
CPT0009060003
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0088550004
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0088900003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0025230003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0086870003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0089020003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0092190003
Normal
-0.2
CPT0010110003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0079410003
Tumor
-0.3
CPT0001220008
Tumor
-0.3
CPT0063640001
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0079380003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0025880003
Tumor
-0.3
CPT0014370004
Tumor
-0.3
CPT0018250001
Normal
-0.4
CPT0088480003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0089460004
Tumor
-0.5
CPT0076350001
Normal
-0.5
CPT0069010001
Normal
-0.5
CPT0086830003
Normal
-0.5
CPT0015810003
Tumor
-0.5
CPT0025350003
Tumor
-0.5
CPT0077110003
Tumor
-0.6
CPT0010120001
Normal
-0.6
CPT0086950003
Tumor
-0.6
CPT0075170001
Normal
-0.7
CPT0078930003
Tumor
-0.7
CPT0006530001
Normal
-0.7
CPT0071150004
Tumor
-0.7
CPT0092160003
Tumor
-0.7
CPT0087040003
Tumor
-0.7
CPT0077140001
Normal
-0.7
CPT0001190001
Normal
-0.8
CPT0017450001
Normal
-0.8
CPT0012370003
Tumor
-0.8
CPT0065820001
Normal
-0.8
CPT0078660003
Tumor
-0.8
CPT0011410003
Tumor
-0.9
CPT0010160003
Tumor
-0.9
CPT0014130001
Normal
-0.9
CPT0007870001
Normal
-1.0
CPT0088710001
Normal
-1.0
CPT0012920003
Normal
-1.0
CPT0025060001
Normal
-1.0
CPT0009000003
Tumor
-1.1
CPT0079180003
Tumor
-1.1
CPT0012770003
Normal
-1.1
CPT0079480003
Tumor
-1.1
CPT0013790003
Normal
-1.1
CPT0064370003
Tumor
-1.1
CPT0092310003
Normal
-1.2
CPT0001340003
Tumor
-1.2
CPT0009020003
Normal
-1.2
CPT0012290003
Normal
-1.2
CPT0024670003
Tumor
-1.2
CPT0012090003
Normal
-1.2
CPT0025610001
Normal
-1.2
CPT0077500001
Normal
-1.3
CPT0014470001
Normal
-1.3
CPT0078830003
Tumor
-1.3
CPT0001550001
Normal
-1.3
CPT0023360001
Normal
-1.3
CPT0001510001
Normal
-1.3
CPT0082010001
Normal
-1.3
CPT0086890003
Normal
-1.3
CPT0079270003
Tumor
-1.3
CPT0024680001
Normal
-1.3
CPT0012570003
Normal
-1.3
CPT0063330001
Normal
-1.3
CPT0087050003
Normal
-1.3
CPT0000790001
Normal
-1.4
CPT0026420001
Normal
-1.4
CPT0009080003
Normal
-1.4
CPT0015730003
Tumor
-1.4
CPT0078940001
Normal
-1.4
CPT0081620001
Normal
-1.4
CPT0066520001
Normal
-1.4
CPT0078840001
Normal
-1.4
CPT0089480003
Normal
-1.4
CPT0001500009
Tumor
-1.5
CPT0006440003
Tumor
-1.5
CPT0020020001
Normal
-1.5
CPT0023710001
Normal
-1.5
CPT0075570001
Normal
-1.5
CPT0002370001
Normal
-1.5
CPT0012180003
Tumor
-1.5
CPT0012640003
Normal
-1.5
CPT0006950001
Normal
-1.5
CPT0000890001
Normal
-1.5
CPT0002270011
Tumor
-1.5
CPT0089040001
Normal
-1.5
CPT0078670001
Normal
-1.6
CPT0010170001
Normal
-1.6
CPT0066430001
Normal
-1.6
CPT0065810003
Tumor
-1.6
CPT0079510001
Normal
-1.6
CPT0001540009
Tumor
-1.6
CPT0001230001
Normal
-1.6
CPT0092740003
Normal
-1.6
CPT0086370003
Normal
-1.6
CPT0025050003
Tumor
-1.6
CPT0020130001
Normal
-1.6
CPT0088640003
Normal
-1.7
CPT0088780001
Normal
-1.7
CPT0065450001
Normal
-1.7
CPT0079430001
Normal
-1.7
CPT0078800003
Tumor
-1.7
CPT0069190001
Normal
-1.8
CPT0012550003
Tumor
-1.8
CPT0025920001
Normal
-1.8
CPT0086970003
Normal
-1.8
CPT0092800003
Normal
-1.8
CPT0001350001
Normal
-1.9
CPT0014350001
Normal
-1.9
CPT0000870016
Tumor
-1.9
CPT0078530001
Normal
-1.9
CPT0088570001
Normal
-2.0
CPT0088500001
Normal
-2.0
CPT0006630003
Tumor
-2.0
CPT0088920001
Normal
-2.0
CPT0019160001
Normal
-2.0
CPT0079300001
Normal
-2.0
CPT0064400001
Normal
-2.1
CPT0006730001
Normal
-2.1
CPT0026410003
Tumor
-2.2
CPT0014450004
Tumor
-2.3
CPT0079000001
Normal
-2.4
CPT0078990003
Tumor
-2.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
