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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NDUFA13 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
519.4
Number of samples
349
Samples
Sample
Description
TPM
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
2630.9
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
1460.9
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
1354.8
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
1349.7
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
1288.0
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1232.2
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
1226.5
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
1212.4
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
1198.2
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
1157.8
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
1119.0
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
1053.2
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
1052.4
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
1035.4
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
1013.1
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
1003.7
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
1001.6
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
954.7
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
946.2
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
933.9
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
926.7
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
923.6
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
916.3
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
873.7
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
867.9
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
852.4
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
840.2
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
837.6
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
834.5
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
833.1
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
830.4
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
826.7
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
818.3
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
815.5
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
811.1
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
802.0
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
797.9
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
796.6
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
794.9
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
792.7
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
789.3
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
788.2
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
787.5
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
782.9
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
776.2
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
773.1
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
770.5
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
769.1
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
767.4
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
760.9
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
760.1
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
755.9
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
753.9
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
753.3
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
751.8
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
751.1
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
741.9
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
734.0
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
730.9
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
728.8
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
712.4
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
710.7
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
707.0
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
706.8
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
706.2
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
704.1
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
703.5
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
701.9
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
700.6
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
697.7
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
696.9
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
690.9
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
686.0
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
682.2
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
682.1
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
678.8
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
668.8
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
663.9
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
656.4
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
655.9
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
655.1
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
651.9
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
650.9
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
650.5
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
650.5
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
649.3
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
647.5
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
638.1
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
638.1
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
637.2
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
632.1
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
630.6
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
628.9
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
627.8
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
624.4
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
619.9
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
610.3
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
606.5
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
605.7
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
605.0
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
604.8
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
597.3
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
596.6
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
596.2
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
596.2
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
595.8
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
595.7
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
594.0
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
593.5
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
591.2
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
587.0
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
583.2
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
580.7
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
576.7
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
574.2
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
572.9
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
571.1
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
565.5
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
558.7
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
557.8
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
554.8
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
553.4
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
551.4
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
549.5
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
548.2
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
545.9
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
543.4
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
542.1
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
539.1
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
536.8
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
536.5
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
535.6
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
533.1
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
532.8
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
532.7
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
529.4
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
528.5
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
526.2
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
525.5
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
524.0
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
523.5
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
522.0
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
519.3
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
518.1
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
512.3
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
511.0
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
507.2
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
507.1
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
505.2
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
505.1
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
504.0
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
501.6
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
498.0
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
497.7
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
494.8
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
494.1
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
493.6
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
492.4
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
487.8
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
487.4
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
485.7
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
485.5
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
483.3
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
482.8
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
481.9
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
476.3
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
474.5
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
474.3
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
472.8
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
472.7
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
470.9
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
468.1
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
468.1
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
465.4
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
461.0
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
459.5
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
456.5
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
454.2
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
453.2
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
452.5
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
451.9
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
448.1
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
447.4
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
445.2
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
444.2
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
443.2
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
442.6
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
442.5
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
442.4
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
441.1
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
436.2
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
435.7
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
434.4
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
434.1
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
432.4
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
430.2
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
428.7
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
424.8
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
423.5
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
422.7
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
418.6
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
416.9
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
416.8
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
416.1
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
415.0
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
414.0
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
412.3
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
407.0
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
404.1
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
403.7
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
401.7
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
400.5
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
396.5
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
392.7
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
390.6
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
390.6
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
390.3
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
389.5
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
385.3
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
384.7
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
383.7
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
383.3
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
383.1
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
383.0
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
380.8
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
379.8
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
379.7
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
379.7
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
378.6
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
377.6
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
377.5
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
377.4
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
375.7
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
374.9
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
374.0
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
372.9
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
370.1
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
368.6
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
367.5
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
367.2
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
367.1
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
367.0
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
366.6
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
365.3
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
364.9
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
364.2
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
362.0
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
361.6
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
361.1
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
358.8
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
358.0
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
357.0
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
354.9
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
353.7
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
351.8
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
350.2
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
349.6
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
348.6
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
348.1
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
346.3
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
346.3
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
343.6
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
341.9
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
341.1
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
338.8
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
336.3
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
336.1
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
334.9
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
334.1
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
332.3
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
330.9
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
330.6
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
327.9
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
327.3
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
327.0
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
323.4
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
322.8
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
322.1
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
318.3
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
317.8
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
317.5
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
317.1
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
317.0
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
316.2
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
316.0
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
315.3
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
312.6
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
312.5
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
312.1
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
312.1
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
309.0
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
308.7
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
307.2
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
305.0
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
304.2
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
302.2
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
299.5
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
298.9
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
296.4
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
295.0
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
294.9
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
294.7
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
293.2
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
291.4
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
289.0
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
288.1
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
286.2
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
286.0
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
286.0
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
283.8
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
282.5
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
280.8
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
280.3
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
274.2
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
274.1
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
270.7
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
270.3
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
269.1
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
267.7
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
267.6
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
267.4
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
261.6
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
260.6
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
258.3
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
257.9
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
255.5
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
254.6
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
254.2
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
253.1
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
251.4
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
248.0
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
246.2
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
243.1
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
240.7
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
237.4
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
237.3
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
237.2
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
234.4
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
233.9
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
227.5
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
224.1
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
223.6
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
218.7
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
202.0
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
189.9
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
187.0
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
177.9
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
173.1
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NDUFA13 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
395.1
Number of samples
81
Samples
Sample
Description
TPM
DO46581
0 years, female, NA, stage:III, dead, 408 days
2854.0
DO46333
0 years, female, NA, stage:III, dead, 359 days
1813.8
DO46366
0 years, female, NA, stage:III, dead, 2054 days
1503.0
DO46356
0 years, female, NA, stage:III, dead, 911 days
1425.3
DO46611
0 years, female, NA, stage:III, dead, 734 days
1037.5
DO46350
0 years, female, NA, stage:III, dead, 886 days
931.2
DO46576
0 years, female, NA, stage:III, alive, 133 days
782.2
DO46331
0 years, female, NA, stage:III, dead, 612 days
773.5
DO46380
0 years, female, NA, stage:III, dead, 1423 days
624.2
DO46538
0 years, female, NA, stage:III, dead, 1527 days
615.7
DO46370
0 years, female, NA, stage:III, dead, 1727 days
554.6
DO46551
0 years, female, NA, stage:III, dead, 1055 days
545.4
DO46390
0 years, female, NA, stage:III, dead, 374 days
511.2
DO46352
0 years, female, NA, stage:III, dead, 677 days
509.3
DO46368
0 years, female, NA, stage:III, dead, 2879 days
451.5
DO46342
0 years, female, NA, stage:III, dead, 1398 days
446.3
DO46448
0 years, female, NA, stage:III, dead, 654 days
433.7
DO46493
0 years, female, NA, stage:IV, alive, 839 days
422.6
DO46364
0 years, female, NA, stage:III, dead, 806 days
419.8
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
417.3
DO46376
0 years, female, NA, stage:III, dead, 1430 days
379.6
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
373.3
DO46329
0 years, female, NA, stage:III, dead, 1699 days
356.1
DO46348
0 years, female, NA, stage:IV, dead, 287 days
354.8
DO46453
0 years, female, NA, stage:III, dead, 3294 days
347.3
DO46586
0 years, female, NA, stage:III, dead, 1019 days
339.0
DO46463
0 years, female, NA, stage:III, dead, 2451 days
335.8
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
334.1
DO46566
0 years, female, NA, stage:III, dead, 673 days
329.1
DO46388
0 years, female, NA, stage:III, dead, 413 days
326.3
DO46392
0 years, female, NA, stage:III, dead, 628 days
326.2
DO46330
0 years, female, NA, stage:III, dead, 684 days
325.4
DO46412
0 years, female, NA, stage:III, dead, 597 days
323.9
DO46372
0 years, female, NA, stage:III, dead, 1326 days
310.3
DO46508
0 years, female, NA, stage:III, dead, 2101 days
309.6
DO46432
0 years, female, NA, stage:III, alive, 2218 days
302.5
DO46374
0 years, female, NA, stage:III, dead, 1409 days
292.3
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
288.4
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
286.9
DO46528
0 years, female, NA, stage:III, alive, 6139 days
286.7
DO46334
0 years, female, NA, stage:III, dead, 496 days
282.5
DO46568
0 years, female, NA, stage:III, dead, 320 days
274.2
DO46560
0 years, female, NA, stage:IV, dead, 286 days
260.9
DO46378
0 years, female, NA, stage:III, alive, 843 days
253.8
DO46533
0 years, female, NA, stage:III, alive, 3667 days
253.6
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
252.1
DO46400
0 years, female, NA, stage:III, dead, 719 days
250.8
DO46571
0 years, female, NA, stage:III, dead, 243 days
248.8
DO46386
0 years, female, NA, stage:III, dead, 1162 days
248.3
DO46340
0 years, female, NA, stage:III, dead, 616 days
241.5
DO46344
0 years, female, NA, stage:III, dead, 642 days
235.6
DO46396
0 years, female, NA, stage:III, dead, 583 days
234.0
DO46602
0 years, female, NA, stage:III, dead, 205 days
232.9
DO46325
0 years, female, NA, stage:III, dead, 477 days
232.8
DO46332
0 years, female, NA, stage:III, dead, 689 days
231.5
DO46591
0 years, female, NA, stage:III, dead, 195 days
220.4
DO46408
0 years, female, NA, stage:III, dead, 489 days
214.2
DO46443
0 years, female, NA, stage:III, dead, 2464 days
213.9
DO46358
0 years, female, NA, stage:III, dead, 423 days
212.2
DO46382
0 years, female, NA, stage:IV, dead, 311 days
211.4
DO46336
0 years, female, NA, stage:IV, dead, 664 days
209.7
DO46354
0 years, female, NA, stage:III, dead, 843 days
208.9
DO46468
0 years, female, NA, stage:III, alive, 2776 days
208.5
DO46398
0 years, female, NA, stage:III, alive, 437 days
207.8
DO46518
0 years, female, NA, stage:III, alive, 2960 days
206.3
DO46546
0 years, female, NA, stage:III, dead, 1889 days
206.3
DO46436
0 years, female, NA, stage:III, alive, 3193 days
204.7
DO46384
0 years, female, NA, stage:III, dead, 614 days
193.9
DO46346
0 years, female, NA, stage:III, dead, 1187 days
191.6
DO46338
0 years, female, NA, stage:III, dead, 596 days
186.4
DO46327
0 years, female, NA, stage:III, dead, 184 days
182.3
DO46606
0 years, female, NA, stage:III, alive, 804 days
177.4
DO46561
0 years, female, NA, stage:III, dead, 195 days
176.2
DO46588
0 years, female, NA, stage:III, dead, 438 days
152.9
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
150.3
DO46326
0 years, female, NA, stage:III, dead, 701 days
138.3
DO46402
0 years, female, NA, stage:III, dead, 511 days
137.6
DO46597
0 years, female, NA, stage:III, dead, 393 days
135.5
DO46328
0 years, female, NA, stage:III, dead, 972 days
119.6
DO46362
0 years, female, NA, stage:III, dead, 1639 days
117.3
DO46404
0 years, female, NA, stage:III, dead, 690 days
93.7
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
1.6
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
0.9
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
0.8
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.7
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.7
1db5574d-aca7-403c-8100-6e705f_D2
Normal
0.6
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
0.5
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
0.5
21efd60f-6a31-4b98-9477-16a905_D2
Normal
0.5
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.4
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.4
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
0.4
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
0.3
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.3
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.3
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.3
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
0.3
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.3
a65d8e76-640f-4341-a561-afbb57_D2
Normal
0.3
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.2
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.2
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
0.2
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
0.2
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.2
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.2
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.2
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
0.1
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.1
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.1
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
0.1
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.1
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
0.1
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.1
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.1
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.1
15524912-685a-47ce-a824-567848_D2
Tumor
0.1
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
0.1
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.1
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.0
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
0.0
161317f3-1a39-438e-af45-cd2502_D2
Tumor
0.0
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.0
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
0.0
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.0
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.0
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.0
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.0
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.0
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.0
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.0
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
0.0
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.1
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.1
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.1
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
-0.1
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-0.1
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.1
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-0.1
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-0.1
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.1
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
-0.1
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-0.1
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
-0.1
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-0.1
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-0.1
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-0.1
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-0.1
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-0.2
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
-0.2
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.2
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-0.2
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-0.2
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-0.2
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.2
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
-0.2
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
-0.2
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.2
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
-0.2
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.2
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-0.2
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-0.3
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.3
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.3
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.3
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.3
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-0.3
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-0.4
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-0.4
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-0.4
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
-0.4
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.4
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.4
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.5
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.5
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.5
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-0.5
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
-0.5
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-0.6
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-0.7
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-0.8
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-0.9
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-1.0
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-1.1
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-1.1
e9d416e7-f661-400a-896e-388545_D2
Tumor
-1.2
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-1.2
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-1.2
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
-1.3
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.