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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MORF4L1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
103.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
330.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
299.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
294.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
292.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
291.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
271.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
269.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
254.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
251.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
251.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
250.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
244.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
237.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
236.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
236.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
232.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
220.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
218.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
215.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
213.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
210.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
207.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
200.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
190.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
190.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
189.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
188.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
186.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
184.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
182.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
182.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
178.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
178.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
177.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
175.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
172.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
170.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
169.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
167.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
167.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
164.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
164.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
162.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
159.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
159.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
158.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
158.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
156.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
155.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
154.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
154.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
151.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
151.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
151.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
149.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
149.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
148.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
148.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
147.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
146.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
145.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
145.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
144.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
144.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
143.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
143.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
143.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
140.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
139.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
139.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
138.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
138.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
138.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
138.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
137.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
137.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
136.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
136.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
135.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
134.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
134.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
133.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
133.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
132.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
132.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
132.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
131.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
131.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
131.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
131.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
130.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
130.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
129.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
128.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
127.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
127.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
127.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
127.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
126.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
126.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
124.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
124.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
124.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
123.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
123.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
122.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
122.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
122.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
121.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
120.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
119.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
119.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
119.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
118.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
117.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
117.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
117.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
117.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
116.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
116.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
115.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
115.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
114.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
114.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
114.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
113.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
113.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
113.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
113.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
112.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
112.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
112.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
112.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
112.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
111.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
111.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
110.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
110.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
110.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
110.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
109.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
109.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
109.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
108.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
106.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
105.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
105.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
105.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
104.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
104.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
104.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
104.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
104.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
103.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
103.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
103.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
103.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
103.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
102.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
102.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
102.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
102.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
102.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
101.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
101.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
100.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
100.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
99.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
99.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
99.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
98.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
98.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
97.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
97.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
97.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
96.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
96.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
96.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
96.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
96.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
96.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
96.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
94.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
94.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
94.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
94.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
93.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
93.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
92.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
92.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
92.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
91.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
91.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
91.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
89.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
89.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
89.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
89.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
89.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
89.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
89.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
88.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
88.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
88.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
87.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
87.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
86.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
86.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
86.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
86.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
86.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
85.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
84.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
84.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
84.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
82.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
81.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
80.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
80.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
80.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
80.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
78.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
78.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
77.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
76.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
76.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
76.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
76.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
76.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
76.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
76.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
75.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
75.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
75.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
75.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
74.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
74.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
74.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
74.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
74.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
74.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
74.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
74.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
73.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
73.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
72.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
72.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
72.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
72.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
72.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
71.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
71.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
71.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
71.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
71.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
71.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
70.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
70.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
70.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
69.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
69.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
69.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
68.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
68.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
68.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
68.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
68.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
67.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
67.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
67.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
66.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
66.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
65.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
64.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
64.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
64.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
64.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
63.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
62.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
62.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
62.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
61.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
61.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
61.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
60.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
60.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
59.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
59.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
59.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
59.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
59.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
58.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
58.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
58.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
57.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
57.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
56.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
55.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
55.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
54.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
54.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
53.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
52.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
52.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
52.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
51.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
51.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
51.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
50.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
50.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
50.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
50.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
50.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
50.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
49.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
49.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
48.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
48.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
48.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
47.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
47.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
47.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
47.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
46.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
46.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
46.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
46.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
46.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
45.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
45.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
45.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
43.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
41.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
40.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
40.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
40.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
39.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
39.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
38.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
37.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
37.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
36.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
36.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
34.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
34.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
33.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
33.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
33.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
32.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
31.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
30.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
29.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
28.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
26.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
26.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
25.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
25.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
21.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
21.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
20.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
20.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MORF4L1 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
114.4
Number of samples
231
Samples
Sample
Description
TPM
DO45217
0 years, female, NA, stage:3, dead, 270 days
264.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
261.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
259.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
257.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
240.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
228.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
227.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
226.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
218.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
216.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
215.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
209.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
205.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
201.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
200.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
198.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
198.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
195.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
194.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
190.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
189.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
187.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
182.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
182.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
180.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
178.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
178.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
176.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
172.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
170.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
170.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
170.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
169.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
167.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
167.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
166.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
165.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
164.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
160.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
160.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
157.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
153.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
153.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
152.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
151.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
151.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
150.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
150.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
148.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
148.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
146.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
146.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
145.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
144.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
143.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
143.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
142.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
142.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
142.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
142.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
139.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
139.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
138.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
138.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
137.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
137.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
136.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
134.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
133.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
131.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
131.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
130.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
130.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
130.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
130.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
129.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
129.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
128.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
128.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
127.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
126.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
125.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
124.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
124.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
124.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
123.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
123.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
122.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
122.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
122.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
121.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
120.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
119.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
119.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
119.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
119.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
118.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
118.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
117.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
116.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
116.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
115.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
114.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
114.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
111.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
110.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
110.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
109.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
109.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
106.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
106.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
105.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
104.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
104.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
104.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
103.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
103.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
102.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
102.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
102.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
101.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
101.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
101.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
101.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
101.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
101.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
99.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
99.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
99.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
99.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
99.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
99.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
98.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
98.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
97.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
97.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
96.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
96.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
94.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
94.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
93.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
92.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
92.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
91.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
91.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
91.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
91.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
90.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
89.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
88.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
88.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
88.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
87.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
87.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
87.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
85.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
85.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
85.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
85.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
85.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
85.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
84.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
84.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
83.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
83.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
82.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
81.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
81.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
80.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
80.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
80.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
80.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
79.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
79.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
78.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
78.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
78.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
78.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
77.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
77.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
77.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
76.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
76.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
75.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
75.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
75.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
74.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
74.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
73.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
73.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
71.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
70.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
70.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
69.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
69.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
69.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
68.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
67.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
66.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
65.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
64.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
64.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
64.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
63.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
63.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
61.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
59.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
58.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
55.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
55.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
53.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
53.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
51.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
51.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
51.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
51.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
51.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
50.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
49.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
45.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
44.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
43.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
43.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
43.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
42.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
42.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
40.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
39.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
35.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
28.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
25.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
965
Tumor
1.2
951
Tumor
1.1
743
Tumor
1.1
983
Tumor
1.0
535
Tumor
0.8
957
Tumor
0.8
447
Tumor
0.8
211
Tumor
0.8
817
Tumor
0.7
877
Tumor
0.7
285
Tumor
0.7
411
Tumor
0.7
497
Tumor
0.7
331
Tumor
0.7
385
Tumor
0.6
815
Tumor
0.6
131
Tumor
0.6
517
Tumor
0.6
661
Tumor
0.6
737
Tumor
0.6
814
Normal
0.6
724
Normal
0.6
671
Tumor
0.6
1013
Tumor
0.5
367
Tumor
0.5
343
Tumor
0.5
351
Tumor
0.5
813
Tumor
0.5
463
Tumor
0.5
977
Tumor
0.5
425
Tumor
0.5
283
Tumor
0.5
277
Tumor
0.5
1031
Tumor
0.5
355
Tumor
0.5
975
Tumor
0.5
413
Tumor
0.5
967
Tumor
0.4
487
Tumor
0.4
537
Tumor
0.4
297
Tumor
0.4
311
Tumor
0.4
1025
Tumor
0.4
1021
Tumor
0.4
545
Tumor
0.4
313
Tumor
0.4
391
Tumor
0.3
161
Tumor
0.3
455
Tumor
0.3
923
Tumor
0.3
493
Tumor
0.3
573
Tumor
0.3
383
Tumor
0.3
357
Tumor
0.3
695
Tumor
0.3
431
Tumor
0.3
937
Tumor
0.3
641
Tumor
0.3
221
Tumor
0.3
433
Tumor
0.3
523
Tumor
0.3
127
Tumor
0.3
881
Tumor
0.3
341
Tumor
0.2
921
Tumor
0.2
483
Tumor
0.2
123
Tumor
0.2
271
Tumor
0.2
917
Tumor
0.2
1015
Tumor
0.2
384
Normal
0.2
727
Tumor
0.2
563
Tumor
0.2
467
Tumor
0.2
953
Tumor
0.2
715
Tumor
0.2
647
Tumor
0.2
865
Tumor
0.2
461
Tumor
0.2
963
Tumor
0.2
663
Tumor
0.1
213
Tumor
0.1
863
Tumor
0.1
533
Tumor
0.1
571
Tumor
0.1
883
Tumor
0.1
171
Tumor
0.1
1043
Tumor
0.1
823
Tumor
0.1
525
Tumor
0.1
672
Normal
0.1
427
Tumor
0.1
387
Tumor
0.1
473
Tumor
0.1
443
Tumor
0.1
536
Normal
0.1
943
Tumor
0.1
477
Tumor
0.1
741
Tumor
0.1
217
Tumor
0.1
363
Tumor
0.1
635
Tumor
0.1
617
Tumor
0.0
465
Tumor
0.0
471
Tumor
0.0
135
Tumor
0.0
976
Normal
0.0
375
Tumor
0.0
524
Normal
0.0
352
Normal
0.0
567
Tumor
0.0
445
Tumor
0.0
435
Tumor
0.0
185
Tumor
0.0
492
Normal
0.0
615
Tumor
0.0
478
Normal
0.0
113
Tumor
0.0
984
Normal
0.0
713
Tumor
0.0
187
Tumor
0.0
861
Tumor
0.0
395
Tumor
0.0
553
Tumor
0.0
112
Tumor
-0.1
125
Tumor
-0.1
421
Tumor
-0.1
1045
Tumor
-0.1
498
Normal
-0.1
141
Tumor
-0.1
744
Normal
-0.1
227
Tumor
-0.1
342
Normal
-0.1
1044
Normal
-0.1
257
Tumor
-0.1
261
Tumor
-0.1
344
Normal
-0.1
515
Tumor
-0.1
142
Normal
-0.1
914
Normal
-0.1
145
Tumor
-0.1
448
Normal
-0.1
873
Tumor
-0.1
534
Normal
-0.1
978
Normal
-0.1
955
Tumor
-0.1
966
Normal
-0.1
867
Tumor
-0.1
491
Tumor
-0.1
481
Tumor
-0.1
628
Normal
-0.1
665
Tumor
-0.1
423
Tumor
-0.1
785
Tumor
-0.1
422
Normal
-0.1
223
Tumor
-0.1
527
Tumor
-0.1
488
Normal
-0.1
1027
Tumor
-0.1
354
Normal
-0.1
862
Normal
-0.1
925
Tumor
-0.1
482
Normal
-0.1
361
Tumor
-0.1
697
Tumor
-0.1
546
Normal
-0.1
434
Normal
-0.2
964
Normal
-0.2
538
Normal
-0.2
742
Normal
-0.2
472
Normal
-0.2
685
Tumor
-0.2
981
Tumor
-0.2
852
Normal
-0.2
558
Normal
-0.2
353
Tumor
-0.2
358
Normal
-0.2
494
Normal
-0.2
698
Normal
-0.2
866
Normal
-0.2
777
Tumor
-0.2
618
Normal
-0.2
916
Normal
-0.2
755
Tumor
-0.2
721
Tumor
-0.2
554
Normal
-0.2
728
Normal
-0.2
926
Normal
-0.2
874
Normal
-0.2
738
Normal
-0.2
958
Normal
-0.2
723
Tumor
-0.2
1026
Normal
-0.2
864
Normal
-0.2
912
Normal
-0.2
662
Normal
-0.2
1032
Normal
-0.2
528
Normal
-0.2
224
Normal
-0.2
857
Tumor
-0.2
716
Normal
-0.2
696
Normal
-0.2
557
Tumor
-0.2
642
Normal
-0.2
868
Normal
-0.2
1014
Normal
-0.2
462
Normal
-0.2
444
Normal
-0.2
922
Normal
-0.2
1046
Normal
-0.2
415
Tumor
-0.2
882
Normal
-0.2
636
Normal
-0.2
146
Normal
-0.2
648
Normal
-0.2
231
Tumor
-0.2
627
Tumor
-0.2
572
Normal
-0.2
851
Tumor
-0.2
466
Normal
-0.2
192
Normal
-0.2
918
Normal
-0.2
365
Tumor
-0.2
284
Normal
-0.2
956
Normal
-0.2
468
Normal
-0.2
188
Normal
-0.2
968
Normal
-0.2
474
Normal
-0.2
924
Normal
-0.2
745
Tumor
-0.2
616
Normal
-0.2
954
Normal
-0.3
664
Normal
-0.3
393
Tumor
-0.3
722
Normal
-0.3
428
Normal
-0.3
666
Normal
-0.3
913
Tumor
-0.3
147
Tumor
-0.3
884
Normal
-0.3
1016
Normal
-0.3
298
Normal
-0.3
138
Normal
-0.3
858
Normal
-0.3
416
Normal
-0.3
195
Tumor
-0.3
362
Normal
-0.3
915
Tumor
-0.3
878
Normal
-0.3
364
Normal
-0.3
228
Normal
-0.3
756
Normal
-0.3
426
Normal
-0.3
414
Normal
-0.3
137
Tumor
-0.3
574
Normal
-0.3
268
Normal
-0.3
191
Tumor
-0.3
513
Tumor
-0.3
1028
Normal
-0.3
1042
Normal
-0.3
816
Normal
-0.3
126
Normal
-0.3
714
Normal
-0.3
262
Normal
-0.3
412
Normal
-0.3
451
Tumor
-0.3
778
Normal
-0.3
212
Normal
-0.3
128
Normal
-0.3
132
Normal
-0.3
464
Normal
-0.3
1041
Tumor
-0.4
516
Normal
-0.4
376
Normal
-0.4
136
Normal
-0.4
424
Normal
-0.4
456
Normal
-0.4
272
Normal
-0.4
564
Normal
-0.4
312
Normal
-0.4
484
Normal
-0.4
518
Normal
-0.4
568
Normal
-0.4
982
Normal
-0.4
368
Normal
-0.4
786
Normal
-0.4
952
Normal
-0.4
686
Normal
-0.4
944
Normal
-0.4
114
Normal
-0.4
332
Normal
-0.4
938
Normal
-0.4
286
Normal
-0.4
911
Tumor
-0.4
1022
Normal
-0.4
526
Normal
-0.4
267
Tumor
-0.4
746
Normal
-0.4
356
Normal
-0.4
818
Normal
-0.5
124
Normal
-0.5
824
Normal
-0.5
432
Normal
-0.5
386
Normal
-0.5
514
Normal
-0.5
328
Normal
-0.5
452
Normal
-0.5
172
Normal
-0.5
446
Normal
-0.5
214
Normal
-0.5
314
Normal
-0.5
218
Normal
-0.5
366
Normal
-0.5
278
Normal
-0.5
396
Normal
-0.5
232
Normal
-0.5
196
Normal
-0.5
111
Normal
-0.5
222
Normal
-0.5
327
Tumor
-0.5
436
Normal
-0.6
148
Normal
-0.6
186
Normal
-0.6
392
Normal
-0.6
162
Normal
-0.6
388
Normal
-0.7
258
Normal
-0.7
394
Normal
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.