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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MORF4L1 is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
429.1
Number of samples
283
Samples
Sample
Description
TPM
TCGA-FU-A3TX-01A
0 years, female, stage:Stage IB, alive, 45 days
4121.6
TCGA-VS-A9V0-01A
0 years, female, stage:Stage IB, alive, 573 days
2070.7
TCGA-VS-A9UP-01A
0 years, female, stage:Stage IIA, alive, 1444 days
1864.7
TCGA-VS-A9UL-01A
0 years, female, white, stage:Stage IIIB, dead, 442 days
1815.9
TCGA-EA-A1QS-01A
0 years, female, white, stage:Stage IB, alive, 1203 days
1804.1
TCGA-GH-A9DA-01A
0 years, female, white, stage:Stage IB, alive, 540 days
1745.2
TCGA-C5-A7X3-01A
0 years, female, white, stage:Stage IIIB, dead, 284 days
1684.2
TCGA-JW-A5VG-01A
0 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
1608.8
TCGA-EA-A3HQ-01A
0 years, female, white, stage:Stage II, alive, 1136 days
1517.1
TCGA-VS-A8EB-01A
0 years, female, white, stage:Stage IIIB, dead, 305 days
1415.3
TCGA-VS-A9V5-01A
0 years, female, white, stage:Stage IIB, dead, 494 days
1395.6
TCGA-DS-A0VK-01A
0 years, female, white, stage:Stage IB, dead, 1118 days
1383.2
TCGA-LP-A4AW-01A
0 years, female, asian, stage:Stage IA, alive, 27 days
1378.0
TCGA-VS-A8EH-01A
0 years, female, stage:Stage IIIB, alive, 986 days
1372.3
TCGA-VS-A8QC-01A
0 years, female, white, stage:Stage IVA, dead, 350 days
1323.8
TCGA-EA-A3HT-01A
0 years, female, white, stage:Stage IB, alive, 954 days
1281.5
TCGA-EK-A2PI-01A
0 years, female, white, stage:Stage IIIB, alive, 586 days
1260.6
TCGA-MA-AA3W-01A
0 years, female, white, stage:Stage IB, alive, 685 days
1246.5
TCGA-C5-A7CJ-01A
0 years, female, white, stage:Stage IIA, dead, 3097 days
1212.5
TCGA-ZJ-AAXA-01A
0 years, female, white, stage:Stage IB, alive, 43 days
1205.0
TCGA-DS-A7WH-01A
0 years, female, white, stage:Stage IB, alive, 533 days
1128.7
TCGA-VS-A8QA-01A
0 years, female, stage:Stage IB, alive, 1099 days
1124.8
TCGA-MA-AA3Y-01A
0 years, female, white, stage:Stage IB, alive, 542 days
1117.1
TCGA-C5-A7X5-01A
0 years, female, black or african american, stage:Stage IVB, dead, 414 days
1110.9
TCGA-DS-A1OC-01A
0 years, female, white, stage:Stage IB, alive, 376 days
1107.5
TCGA-JW-A5VH-01A
0 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
1057.9
TCGA-C5-A901-01A
0 years, female, white, stage:'--, alive, 518 days
1037.8
TCGA-VS-A959-01A
0 years, female, stage:Stage IIB, alive, 1561 days
995.7
TCGA-FU-A3HZ-01A
0 years, female, white, stage:Stage IIA, alive, 1103 days
994.9
TCGA-JW-A5VI-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
979.4
TCGA-VS-A94X-01A
0 years, female, black or african american, stage:Stage IIB, dead, 506 days
952.3
TCGA-MA-AA41-01A
0 years, female, white, stage:Stage IIB, alive, 279 days
936.1
TCGA-C5-A1MJ-01A
0 years, female, white, stage:Stage IB, dead, 14 days
926.9
TCGA-VS-A8EI-01A
0 years, female, white, stage:Stage IIB, alive, 729 days
915.9
TCGA-ZJ-A8QQ-01A
0 years, female, white, stage:Stage IIB, alive, 2056 days
891.6
TCGA-UC-A7PF-01A
0 years, female, stage:Stage IB, dead, 2859 days
890.7
TCGA-FU-A3NI-01A
0 years, female, white, stage:Stage IB, dead, 638 days
866.2
TCGA-C5-A7CM-01A
0 years, female, white, stage:Stage IB, alive, 619 days
864.5
TCGA-C5-A2LZ-01A
0 years, female, white, stage:Stage IIIB, dead, 3046 days
849.1
TCGA-EA-A3HS-01A
0 years, female, white, stage:Stage IB, alive, 959 days
844.7
TCGA-EA-A5ZF-01A
0 years, female, asian, stage:Stage IB, alive, 828 days
837.4
TCGA-C5-A1M5-01A
0 years, female, white, stage:Stage IB, dead, 2052 days
830.1
TCGA-VS-A957-01A
0 years, female, white, stage:Stage IB, alive, 1688 days
823.3
TCGA-FU-A2QG-01A
0 years, female, white, stage:Stage IB, alive, 579 days
816.9
TCGA-VS-A954-01A
0 years, female, stage:Stage IIIB, alive, 1714 days
812.6
TCGA-IR-A3L7-01A
0 years, female, white, stage:Stage IB, alive, 4483 days
790.8
TCGA-UC-A7PI-01A
0 years, female, white, stage:Stage IB, alive, 2114 days
786.7
TCGA-EA-A5ZE-01A
0 years, female, asian, stage:Stage IB, alive, 829 days
773.5
TCGA-C5-A1BJ-01A
0 years, female, white, stage:Stage IIB, alive, 4385 days
768.2
TCGA-C5-A1MP-01A
0 years, female, black or african american, stage:Stage IB, alive, 109 days
744.9
TCGA-IR-A3LC-01A
0 years, female, white, stage:Stage IB, alive, 3935 days
734.1
TCGA-C5-A3HF-01A
0 years, female, white, stage:Stage IB, dead, 543 days
733.8
TCGA-EX-A69M-01A
0 years, female, white, stage:Stage IB, dead, 253 days
704.5
TCGA-VS-A9UU-01A
0 years, female, stage:Stage IIB, alive, 442 days
703.6
TCGA-ZJ-AAXU-01A
0 years, female, white, stage:Stage IIB, alive, 5 days
699.5
TCGA-C5-A2LV-01A
0 years, female, black or african american, stage:Stage IB, alive, 2234 days
672.0
TCGA-JW-A5VJ-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
666.4
TCGA-DS-A1O9-01A
0 years, female, white, stage:Stage IVA, dead, 266 days
643.6
TCGA-MY-A5BD-01A
0 years, female, white, stage:Stage IIB, alive, 1667 days
639.3
TCGA-LP-A7HU-01A
0 years, female, asian, stage:Stage II, alive, 406 days
636.9
TCGA-UC-A7PD-01A
0 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
636.9
TCGA-EA-A556-01A
0 years, female, white, stage:Stage IB, alive, 453 days
632.9
TCGA-VS-A9V1-01A
0 years, female, white, stage:Stage IVB, dead, 157 days
627.7
TCGA-JW-AAVH-01A
0 years, female, white, stage:Stage IB, alive, 552 days
626.7
TCGA-VS-A94W-01A
0 years, female, white, stage:Stage IIB, alive, 1243 days
614.5
TCGA-C5-A8YR-01A
0 years, female, white, stage:Stage IB, dead, 837 days
602.3
TCGA-EK-A2R7-01A
0 years, female, white, stage:Stage IB, alive, 27 days
594.2
TCGA-C5-A7CL-01A
0 years, female, white, stage:Stage IIIB, dead, 471 days
586.8
TCGA-JX-A3PZ-01A
0 years, female, white, stage:Stage IB, dead, 642 days
578.5
TCGA-C5-A0TN-01A
0 years, female, black or african american, stage:Stage IB, dead, 348 days
574.8
TCGA-Q1-A6DT-01A
0 years, female, white, stage:Stage I, dead, 275 days
565.0
TCGA-C5-A3HE-01A
0 years, female, white, stage:Stage IB, alive, 548 days
559.3
TCGA-HM-A3JK-01A
0 years, female, white, stage:Stage IIA, alive, 632 days
555.3
TCGA-IR-A3LH-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2394 days
529.2
TCGA-EK-A2RA-01A
0 years, female, stage:Stage IIA, alive, 1246 days
506.0
TCGA-EX-A3L1-01A
0 years, female, white, stage:Stage IIA, alive, 463 days
462.3
TCGA-Q1-A5R1-01A
0 years, female, white, stage:Stage IB, alive, 474 days
462.3
TCGA-EA-A3HU-01A
0 years, female, white, stage:Stage II, alive, 1013 days
460.9
TCGA-VS-A9U5-01A
0 years, female, white, stage:Stage IIB, alive, 1535 days
447.3
TCGA-C5-A1ML-01A
0 years, female, white, stage:Stage IB, dead, 636 days
443.8
TCGA-DS-A7WI-01A
0 years, female, white, stage:Stage IIA, dead, 252 days
440.7
TCGA-VS-A9UB-01A
0 years, female, stage:Stage IIB, alive, 911 days
433.8
TCGA-VS-A8EJ-01A
0 years, female, white, stage:Stage IIB, dead, 607 days
430.4
TCGA-EA-A5O9-01A
0 years, female, white, stage:Stage IB, alive, 788 days
427.1
TCGA-C5-A8XJ-01A
0 years, female, white, stage:Stage IB, alive, 4467 days
392.6
TCGA-PN-A8MA-01A
0 years, female, black or african american, stage:Stage IIB, alive, 90 days
388.4
TCGA-EK-A2PL-01A
0 years, female, white, stage:Stage IIIB, alive, 13 days
386.2
TCGA-DG-A2KL-01A
0 years, female, stage:Stage IIA, alive, 1367 days
378.4
TCGA-C5-A8YT-01A
0 years, female, white, stage:Stage IB, dead, 633 days
370.8
TCGA-MA-AA43-01A
0 years, female, white, stage:Stage IIIB, alive, 346 days
360.9
TCGA-VS-A9UQ-01A
0 years, female, stage:Stage IB, alive, 1263 days
356.5
TCGA-Q1-A6DW-01A
0 years, female, white, stage:Stage I, alive, 534 days
355.4
TCGA-Q1-A73R-01A
0 years, female, white, stage:Stage I, alive, 567 days
352.9
TCGA-DS-A7WF-01A
0 years, female, stage:Stage IB, dead, 492 days
351.5
TCGA-C5-A1MI-01A
0 years, female, white, stage:Stage IB, dead, 1083 days
350.1
TCGA-C5-A1M6-01A
0 years, female, white, stage:Stage IIB, dead, 955 days
346.0
TCGA-VS-A952-01A
0 years, female, white, stage:Stage IB, alive, 1778 days
344.9
TCGA-EX-A69L-01A
0 years, female, asian, stage:Stage IB, alive, 602 days
335.0
TCGA-EA-A3HR-01A
0 years, female, white, stage:Stage II, alive, 940 days
335.0
TCGA-VS-A9UR-01A
0 years, female, white, stage:Stage IIA, alive, 793 days
334.0
TCGA-FU-A23L-01A
0 years, female, white, stage:Stage IIA, alive, 725 days
332.7
TCGA-DG-A2KH-01A
0 years, female, stage:Stage IB, alive, 34 days
325.5
TCGA-VS-A8Q8-01A
0 years, female, white, stage:Stage IB, dead, 978 days
320.3
TCGA-EK-A3GK-01A
0 years, female, white, stage:Stage IB, alive, 15 days
319.6
TCGA-VS-A9U6-01A
0 years, female, white, stage:Stage IVB, alive, 1320 days
319.2
TCGA-FU-A3WB-01A
0 years, female, white, stage:Stage IIA, alive, 491 days
313.6
TCGA-EK-A2R8-01A
0 years, female, white, stage:Stage IB, alive, 44 days
312.7
TCGA-DS-A0VL-01A
0 years, female, white, stage:Stage IB, dead, 1692 days
311.1
TCGA-C5-A2M2-01A
0 years, female, white, stage:Stage IB, dead, 1011 days
310.4
TCGA-Q1-A73P-01A
0 years, female, white, stage:Stage IB, alive, 483 days
307.5
TCGA-MU-A5YI-01A
0 years, female, black or african american, stage:Stage IA, alive, 1053 days
304.8
TCGA-VS-A950-01A
0 years, female, stage:Stage IIIA, alive, 1221 days
304.4
TCGA-EK-A2IR-01A
0 years, female, white, stage:Stage IB, alive, 3442 days
298.0
TCGA-C5-A3HL-01A
0 years, female, white, stage:Stage IB, alive, 621 days
292.8
TCGA-EX-A1H5-01A
0 years, female, black or african american, stage:Stage IIB, alive, 619 days
291.3
TCGA-EA-A97N-01A
0 years, female, white, stage:Stage IB, alive, 11 days
289.2
TCGA-C5-A8ZZ-01A
0 years, female, white, stage:Stage IIB, alive, 636 days
288.4
TCGA-VS-A9UT-01A
0 years, female, asian, stage:Stage IB, alive, 482 days
286.7
TCGA-EA-A5ZD-01A
0 years, female, asian, stage:Stage IB, alive, 830 days
285.7
TCGA-FU-A3TQ-01A
0 years, female, white, stage:Stage IIIB, alive, 795 days
281.6
TCGA-DS-A1OA-01A
0 years, female, asian, stage:Stage IB, dead, 879 days
281.5
TCGA-EK-A2RL-01A
0 years, female, black or african american, stage:Stage IB, dead, 1453 days
274.9
TCGA-FU-A57G-01A
0 years, female, white, stage:Stage IB, alive, 1078 days
274.7
TCGA-JW-A5VL-01A
0 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
273.3
TCGA-DS-A0VM-01A
0 years, female, white, stage:Stage IB, alive, 3589 days
271.5
TCGA-EK-A2RC-01A
0 years, female, stage:Stage IB, alive, 129 days
269.6
TCGA-Q1-A73S-01A
0 years, female, white, stage:Stage IB, alive, 688 days
267.3
TCGA-EK-A2RM-01A
0 years, female, white, stage:Stage IB, alive, 50 days
263.5
TCGA-4J-AA1J-01A
0 years, female, white, stage:Stage IB, alive, 542 days
263.1
TCGA-C5-A1M9-01A
0 years, female, white, stage:Stage IB, dead, 1065 days
262.4
TCGA-2W-A8YY-01A
0 years, female, white, stage:Stage IB, alive, 533 days
262.0
TCGA-LP-A5U3-01A
0 years, female, asian, stage:Stage IB, alive, 25 days
261.6
TCGA-HG-A2PA-01A
0 years, female, white, stage:Stage IB, dead, 773 days
261.6
TCGA-EA-A439-01A
0 years, female, asian, stage:Stage IIA, alive, 965 days
261.2
TCGA-C5-A1MK-01A
0 years, female, white, stage:Stage IIIB, dead, 74 days
260.2
TCGA-VS-A9V3-01A
0 years, female, white, stage:Stage IVB, alive, 540 days
259.6
TCGA-C5-A7XC-01A
0 years, female, white, stage:Stage IB, alive, 1551 days
256.2
TCGA-C5-A1M8-01A
0 years, female, white, stage:Stage IB, alive, 919 days
254.5
TCGA-ZJ-AAX4-01A
0 years, female, white, stage:Stage II, alive, 21 days
253.4
TCGA-FU-A3HY-01A
0 years, female, white, stage:Stage IB, alive, 954 days
252.4
TCGA-VS-A9UC-01A
0 years, female, stage:Stage IIB, alive, 825 days
250.1
TCGA-C5-A2M1-01A
0 years, female, white, stage:Stage IB, alive, 1169 days
247.4
TCGA-C5-A7CK-01A
0 years, female, white, stage:Stage IVA, dead, 4086 days
247.2
TCGA-BI-A0VS-01A
0 years, female, white, stage:Stage IB, alive, 1735 days
246.5
TCGA-VS-A9UJ-01A
0 years, female, stage:Stage IIB, dead, 52 days
246.2
TCGA-FU-A770-01A
0 years, female, white, stage:Stage IIIB, alive, 34 days
245.9
TCGA-Q1-A73O-01A
0 years, female, stage:Stage IB, alive, 428 days
243.9
TCGA-VS-AA62-01A
0 years, female, white, stage:Stage IIB, dead, 469 days
243.6
TCGA-EA-A5FO-01A
0 years, female, white, stage:Stage IB, alive, 815 days
243.4
TCGA-MU-A51Y-01A
0 years, female, white, stage:Stage IIA, alive, 854 days
240.6
TCGA-MY-A5BF-01A
0 years, female, white, stage:Stage IIA, alive, 634 days
239.9
TCGA-EA-A6QX-01A
0 years, female, asian, stage:Stage IIIB, alive, 730 days
239.4
TCGA-HM-A4S6-01A
0 years, female, white, stage:Stage IIIB, alive, 454 days
239.4
TCGA-EA-A411-01A
0 years, female, white, stage:Stage IB, alive, 747 days
237.7
TCGA-C5-A1BL-01A
0 years, female, white, stage:Stage IB, alive, 5271 days
237.1
TCGA-C5-A2LT-01A
0 years, female, white, stage:Stage IB, alive, 2226 days
235.2
TCGA-DR-A0ZL-01A
0 years, female, asian, stage:Stage IB, alive, 2669 days
234.8
TCGA-LP-A4AX-01A
0 years, female, asian, stage:Stage IB, alive, 380 days
231.8
TCGA-C5-A2LY-01A
0 years, female, white, stage:Stage IB, alive, 2383 days
231.6
TCGA-C5-A1M7-01A
0 years, female, white, stage:Stage IB, alive, 1409 days
231.3
TCGA-MA-AA3Z-01A
0 years, female, white, stage:Stage IB, alive, 595 days
231.3
TCGA-FU-A5XV-01A
0 years, female, white, stage:Stage IIIB, alive, 321 days
229.9
TCGA-JX-A5QV-01A
0 years, female, white, stage:Stage IB, alive, 636 days
227.3
TCGA-HM-A3JJ-01A
0 years, female, black or african american, stage:Stage IB, dead, 659 days
226.8
TCGA-VS-A8EC-01A
0 years, female, white, stage:Stage IIIB, alive, 1415 days
225.0
TCGA-ZJ-A8QR-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
224.6
TCGA-C5-A7UC-01A
0 years, female, white, stage:Stage IB, dead, 523 days
223.6
TCGA-Q1-A73Q-01A
0 years, female, white, stage:Stage I, alive, 284 days
222.4
TCGA-BI-A0VR-01A
0 years, female, white, stage:Stage IIIB, alive, 1505 days
222.3
TCGA-JW-A69B-01A
0 years, female, white, stage:Stage IB, alive, 863 days
222.2
TCGA-EK-A2GZ-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 383 days
221.8
TCGA-Q1-A6DV-01A
0 years, female, asian, stage:Stage IB, alive, 491 days
221.8
TCGA-VS-A8EG-01A
0 years, female, stage:Stage IB, alive, 1386 days
221.5
TCGA-VS-A9UM-01A
0 years, female, black or african american, stage:Stage IVB, dead, 829 days
220.9
TCGA-C5-A8XI-01A
0 years, female, black or african american, stage:Stage IB, alive, 254 days
220.1
TCGA-BI-A20A-01A
0 years, female, white, stage:Stage IB, alive, 720 days
219.7
TCGA-VS-A8EK-01A
0 years, female, white, stage:Stage IVA, dead, 829 days
219.6
TCGA-VS-A8QM-01A
0 years, female, stage:Stage IVB, dead, 951 days
217.8
TCGA-C5-A2LX-01A
0 years, female, white, stage:Stage IB, alive, 2526 days
216.6
TCGA-VS-A8QF-01A
0 years, female, white, stage:Stage IIB, alive, 1800 days
215.9
TCGA-EA-A410-01A
0 years, female, white, stage:Stage IIA, alive, 803 days
214.6
TCGA-EX-A8YF-01A
0 years, female, white, stage:Stage IB, alive, 473 days
213.4
TCGA-RA-A741-01A
0 years, female, white, stage:Stage IIB, alive, 444 days
211.7
TCGA-VS-A94Y-01A
0 years, female, white, stage:Stage IIB, dead, 144 days
209.6
TCGA-EK-A3GJ-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
209.5
TCGA-FU-A3YQ-01A
0 years, female, white, stage:Stage IB, alive, 861 days
209.3
TCGA-EA-A3QE-01A
0 years, female, white, stage:Stage IB, alive, 761 days
207.7
TCGA-VS-A9U7-01A
0 years, female, white, stage:Stage IB, alive, 1472 days
207.6
TCGA-C5-A1ME-01A
0 years, female, white, stage:Stage IB, alive, 1756 days
205.8
TCGA-ZX-AA5X-01A
0 years, female, white, stage:Stage IIIB, alive, 119 days
204.2
TCGA-VS-A8Q9-01A
0 years, female, white, stage:Stage IB, alive, 1630 days
204.2
TCGA-EK-A2IP-01A
0 years, female, white, stage:Stage IB, alive, 202 days
202.8
TCGA-IR-A3LK-01A
0 years, female, white, stage:Stage IB, dead, 908 days
202.3
TCGA-EA-A1QT-01A
0 years, female, white, stage:Stage IB, alive, 1243 days
200.3
TCGA-XS-A8TJ-01A
0 years, female, black or african american, stage:Stage IB, alive, 890 days
198.4
TCGA-EK-A2RE-01A
0 years, female, white, stage:Stage IIA, alive, 57 days
197.6
TCGA-C5-A1BM-01A
0 years, female, black or african american, stage:Stage IB, dead, 2520 days
196.8
TCGA-DS-A5RQ-01A
0 years, female, white, stage:Stage IB, alive, 512 days
196.7
TCGA-FU-A40J-01A
0 years, female, white, stage:Stage IIIB, alive, 426 days
194.7
TCGA-C5-A7CG-01A
0 years, female, white, stage:Stage IB, alive, 6408 days
193.1
TCGA-DS-A1OD-01A
0 years, female, white, stage:Stage IB, alive, 3874 days
192.5
TCGA-C5-A907-01A
0 years, female, white, stage:Stage IB, alive, 448 days
192.5
TCGA-C5-A2LS-01A
0 years, female, white, stage:Stage IB, alive, 1345 days
191.5
TCGA-MY-A913-01A
0 years, female, black or african american, stage:Stage IIA, alive, 524 days
188.5
TCGA-C5-A8XK-01A
0 years, female, black or african american, stage:'--, alive, 3039 days
188.2
TCGA-DS-A3LQ-01A
0 years, female, stage:Stage IIIB, alive, 699 days
186.8
TCGA-C5-A8XH-01A
0 years, female, white, stage:Stage IB, dead, 1394 days
184.9
TCGA-C5-A905-01A
0 years, female, black or african american, stage:Stage IB, alive, 4879 days
184.1
TCGA-EK-A2RO-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
183.4
TCGA-VS-A9V2-01A
0 years, female, white, stage:Stage IB, alive, 555 days
182.0
TCGA-IR-A3LA-01A
0 years, female, white, stage:Stage IB, alive, 4172 days
181.6
TCGA-MY-A5BE-01A
0 years, female, black or african american, stage:Stage IB, alive, 1066 days
179.6
TCGA-LP-A4AU-01A
0 years, female, asian, stage:Stage IIIB, alive, 343 days
179.3
TCGA-VS-A94Z-01A
0 years, female, white, stage:Stage IIB, alive, 1015 days
179.2
TCGA-EK-A2PM-01A
0 years, female, white, stage:Stage IIB, alive, 18 days
176.0
TCGA-VS-A9UI-01A
0 years, female, white, stage:Stage IIB, dead, 1372 days
175.1
TCGA-VS-A9UO-01A
0 years, female, white, stage:Stage IIB, alive, 1456 days
175.0
TCGA-EA-A43B-01A
0 years, female, white, stage:Stage IB, alive, 791 days
174.8
TCGA-LP-A5U2-01A
0 years, female, asian, stage:Stage IIIB, alive, 9 days
174.3
TCGA-C5-A7UH-01A
0 years, female, white, stage:Stage IIIB, alive, 3988 days
174.3
TCGA-UC-A7PG-01A
0 years, female, white, stage:Stage IIIB, dead, 370 days
174.2
TCGA-EK-A2H0-01A
0 years, female, white, stage:Stage IIB, alive, 1847 days
172.8
TCGA-DG-A2KM-01A
0 years, female, stage:Stage IB, alive, 1946 days
172.2
TCGA-VS-A958-01A
0 years, female, white, stage:Stage IIB, alive, 1525 days
169.2
TCGA-IR-A3LF-01A
0 years, female, white, stage:Stage IB, alive, 2949 days
168.9
TCGA-EA-A50E-01A
0 years, female, asian, stage:Stage IVA, dead, 227 days
166.2
TCGA-DS-A0VN-01A
0 years, female, white, stage:Stage IB, alive, 3609 days
165.3
TCGA-MA-AA3X-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 617 days
165.0
TCGA-C5-A902-01A
0 years, female, black or african american, stage:Stage IB, alive, 149 days
164.6
TCGA-EX-A449-01A
0 years, female, white, stage:Stage IVB, alive, 447 days
159.4
TCGA-MU-A8JM-01A
0 years, female, white, stage:Stage IB, alive, 607 days
159.1
TCGA-WL-A834-01A
0 years, female, white, stage:'--, alive, 791 days
158.3
TCGA-C5-A1MN-01A
0 years, female, white, stage:Stage IIIB, dead, 1245 days
158.0
TCGA-JX-A3Q0-01A
0 years, female, black or african american, stage:Stage III, alive, 6375 days
157.2
TCGA-C5-A1MH-01A
0 years, female, white, stage:Stage IIIB, dead, 1186 days
153.2
TCGA-EK-A2PK-01A
0 years, female, white, stage:Stage IB, alive, 12 days
150.4
TCGA-EK-A2R9-01A
0 years, female, white, stage:Stage IB, alive, 4 days
149.3
TCGA-EA-A78R-01A
0 years, female, asian, stage:Stage IB, alive, 410 days
145.3
TCGA-HM-A6W2-01A
0 years, female, black or african american, stage:Stage IVB, alive, 287 days
142.6
TCGA-R2-A69V-01A
0 years, female, white, stage:Stage IB, alive, 596 days
141.7
TCGA-VS-A9UY-01A
0 years, female, stage:Stage IVB, dead, 555 days
137.9
TCGA-EK-A3GN-01A
0 years, female, white, stage:Stage IIIB, alive, 27 days
136.4
TCGA-VS-A953-01A
0 years, female, stage:Stage IVA, dead, 477 days
134.7
TCGA-EK-A2RJ-01A
0 years, female, white, stage:Stage IB, alive, 53 days
134.3
TCGA-C5-A7CH-01A
0 years, female, white, stage:Stage IIB, alive, 4694 days
131.8
TCGA-JW-A5VK-01A
0 years, female, black or african american, stage:Stage IB, alive, 623 days
130.8
TCGA-EK-A2H1-01A
0 years, female, white, stage:Stage IB, alive, 799 days
129.4
TCGA-C5-A7UE-01A
0 years, female, white, stage:Stage IB, alive, 4738 days
128.4
TCGA-EA-A4BA-01A
0 years, female, white, stage:Stage IB, alive, 755 days
127.4
TCGA-EA-A3QD-01A
0 years, female, white, stage:Stage IIIB, alive, 397 days
127.1
TCGA-C5-A7X8-01A
0 years, female, white, stage:Stage IB, alive, 83 days
125.2
TCGA-VS-A9UV-01A
0 years, female, stage:Stage IVA, dead, 104 days
119.6
TCGA-EA-A44S-01A
0 years, female, white, stage:Stage IIIB, alive, 369 days
119.2
TCGA-DG-A2KK-01A
0 years, female, stage:Stage IIIB, alive, 2496 days
119.1
TCGA-VS-A9V4-01A
0 years, female, white, stage:Stage IVA, dead, 132 days
117.0
TCGA-JX-A3Q8-01A
0 years, female, asian, stage:Stage IB, alive, 1357 days
112.0
TCGA-VS-A9UZ-01A
0 years, female, white, stage:Stage IB, alive, 2044 days
111.3
TCGA-DS-A1OB-01A
0 years, female, white, stage:Stage IB, dead, 861 days
110.6
TCGA-VS-A9UH-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1427 days
108.3
TCGA-MA-AA42-01A
0 years, female, white, stage:Stage IIB, alive, 259 days
108.1
TCGA-Q1-A5R2-01A
0 years, female, white, stage:'--, alive, 499 days
107.6
TCGA-VS-A8EL-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1992 days
106.7
TCGA-C5-A1MQ-01A
0 years, female, white, stage:Stage IIA, alive, 1031 days
106.3
TCGA-C5-A8YQ-01A
0 years, female, white, stage:Stage IB, dead, 715 days
94.9
TCGA-C5-A7UI-01A
0 years, female, black or african american, stage:Stage IB, dead, 2888 days
94.9
TCGA-EK-A2PG-01A
0 years, female, black or african american, stage:'--, alive, 46 days
91.2
TCGA-EK-A2RK-01A
0 years, female, white, stage:Stage IA, alive, 13 days
89.7
TCGA-EK-A2RN-01A
0 years, female, white, stage:Stage IB, alive, 71 days
88.9
TCGA-VS-A9UD-01A
0 years, female, white, stage:Stage IIIA, alive, 739 days
87.7
TCGA-EK-A2RB-01A
0 years, female, white, stage:Stage IVB, alive, 9 days
85.5
TCGA-IR-A3LB-01A
0 years, female, white, stage:Stage IB, dead, 2032 days
81.8
TCGA-C5-A7CO-01A
0 years, female, white, stage:Stage IB, alive, 4482 days
81.4
TCGA-FU-A23K-01A
0 years, female, white, stage:Stage IIIB, alive, 372 days
80.7
TCGA-VS-A8QH-01A
0 years, female, white, stage:Stage IB, dead, 1210 days
75.4
TCGA-EA-A3Y4-01A
0 years, female, white, stage:Stage IB, alive, 1122 days
75.1
TCGA-JW-A852-01A
0 years, female, white, stage:Stage IIB, dead, 252 days
72.2
TCGA-IR-A3LI-01A
0 years, female, white, stage:Stage IVB, alive, 2493 days
67.1
TCGA-FU-A3EO-01A
0 years, female, white, stage:Stage IIB, alive, 490 days
64.3
TCGA-IR-A3LL-01A
0 years, female, white, stage:Stage IB, alive, 1106 days
51.5
TCGA-Q1-A5R3-01A
0 years, female, white, stage:'--, alive, 485 days
47.7
TCGA-DR-A0ZM-01A
0 years, female, white, stage:Stage IIIB, alive, 1791 days
45.8
TCGA-C5-A1MF-01A
0 years, female, white, stage:Stage IB, alive, 1617 days
43.9
TCGA-DG-A2KJ-01A
0 years, female, stage:Stage IIIB, alive, 2893 days
28.0
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.