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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NDUFA4L2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
105.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
91.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
78.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
67.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
58.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
51.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
46.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
44.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
38.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
38.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
37.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
37.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
37.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
35.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
33.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
32.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
31.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
31.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
30.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
29.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
28.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
28.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
27.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
26.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
25.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
25.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
24.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
23.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
23.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
23.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
23.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
22.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
21.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
21.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
20.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
20.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
20.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
19.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
19.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
18.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
18.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
16.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
16.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
16.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
16.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
15.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
15.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
15.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
14.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
13.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
9.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
8.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
6.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
5.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
3.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NDUFA4L2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1791.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
7113.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6330.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
6113.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4883.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4558.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
4509.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
4342.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4317.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
4218.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
4186.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4130.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
4114.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
4007.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
3971.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
3894.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
3879.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
3842.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
3665.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
3663.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
3652.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
3622.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
3618.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
3601.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
3594.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3591.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
3590.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
3537.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
3485.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
3472.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
3468.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
3452.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
3412.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
3389.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
3378.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
3365.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
3351.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
3351.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3320.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
3296.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
3260.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
3258.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
3257.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
3249.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
3244.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
3214.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
3205.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
3197.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
3184.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
3184.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3168.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
3145.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
3140.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
3139.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
3126.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
3082.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
3074.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
3050.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
3035.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
3011.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
2993.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
2967.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
2953.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
2950.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
2948.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
2942.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
2936.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
2923.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
2923.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
2894.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
2892.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
2885.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
2879.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2878.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
2876.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
2872.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
2864.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
2852.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
2833.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
2829.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
2817.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
2813.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2795.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
2787.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
2779.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
2769.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
2763.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
2762.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
2744.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
2743.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
2724.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
2719.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
2709.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
2702.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
2696.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
2695.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
2693.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
2674.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
2671.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
2670.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
2669.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
2659.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
2637.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2605.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
2603.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
2597.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
2596.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
2589.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
2583.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
2571.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
2538.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2536.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
2531.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
2530.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
2527.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
2521.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
2506.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
2504.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
2495.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
2486.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
2478.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
2469.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
2468.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
2454.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
2448.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
2441.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
2432.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
2427.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
2407.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
2403.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
2397.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
2382.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
2364.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
2360.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2359.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
2356.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
2352.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
2343.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
2341.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
2325.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
2324.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
2323.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
2318.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
2314.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
2309.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
2309.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
2309.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2300.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
2296.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
2287.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
2280.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
2256.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
2255.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
2245.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
2238.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
2236.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
2224.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
2217.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
2213.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
2204.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
2201.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
2186.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
2182.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
2181.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
2178.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
2158.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
2155.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
2153.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
2147.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
2146.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
2142.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
2142.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
2141.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
2140.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
2136.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
2131.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
2123.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
2123.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
2122.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
2114.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
2111.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
2111.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
2104.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
2095.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
2093.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
2092.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
2087.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
2086.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2072.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
2070.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
2060.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
2056.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
2048.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
2047.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
2042.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
2042.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
2042.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
2038.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
2035.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
2034.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
2030.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
2030.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
2020.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
2018.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
2009.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
2008.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
1993.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
1992.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
1991.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
1991.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
1990.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
1987.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
1983.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
1969.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
1964.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
1963.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
1956.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
1954.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
1948.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
1928.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
1928.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
1928.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
1926.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
1925.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
1925.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
1913.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
1911.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
1906.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
1901.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
1894.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
1887.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
1884.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
1865.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
1863.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
1862.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
1859.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
1852.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
1850.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
1849.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
1845.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
1844.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
1833.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
1824.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
1822.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
1805.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
1799.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
1796.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
1795.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
1791.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
1791.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
1791.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
1786.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
1783.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
1777.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
1771.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
1770.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
1769.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
1766.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
1762.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
1751.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
1747.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
1742.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
1740.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
1740.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
1732.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
1730.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
1726.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
1724.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
1723.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
1720.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
1717.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
1710.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
1704.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
1701.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
1688.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
1683.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
1680.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
1676.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
1675.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
1674.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
1673.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
1672.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
1665.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
1657.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
1650.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
1648.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
1645.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
1642.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1634.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
1631.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
1624.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
1618.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
1609.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
1608.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
1601.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
1597.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
1596.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
1583.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
1581.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
1578.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
1578.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
1577.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
1576.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
1575.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
1573.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
1569.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
1567.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
1558.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1544.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
1540.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
1533.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
1532.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
1527.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1526.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
1526.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
1525.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
1523.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
1520.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
1514.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
1514.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
1513.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
1512.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
1510.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
1506.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
1502.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
1499.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
1499.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
1498.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
1495.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
1488.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
1477.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
1469.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
1462.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
1455.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
1446.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
1439.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
1434.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
1429.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
1428.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
1421.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
1420.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
1418.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
1412.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
1391.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
1388.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
1383.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
1382.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
1365.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
1356.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
1353.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
1348.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1338.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
1333.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
1332.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
1330.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
1326.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
1317.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
1308.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
1306.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
1302.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
1278.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
1275.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
1273.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
1269.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
1265.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
1257.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
1254.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
1241.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
1235.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
1233.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
1231.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
1221.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
1211.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
1209.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
1207.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
1205.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
1205.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
1189.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
1187.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
1186.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
1182.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
1178.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1167.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
1146.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
1134.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1133.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
1128.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
1127.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
1123.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
1112.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
1110.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
1101.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
1099.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
1092.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
1087.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
1073.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
1068.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
1067.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
1057.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
1051.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
1048.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
1025.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
1024.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
1024.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
1023.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1014.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
1012.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
994.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
993.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
992.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
988.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
983.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
979.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
975.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
971.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
962.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
956.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
944.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
943.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
940.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
933.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
900.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
899.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
898.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
891.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
889.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
885.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
875.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
869.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
868.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
855.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
849.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
847.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
844.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
843.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
841.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
829.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
828.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
826.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
805.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
802.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
777.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
759.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
759.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
755.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
748.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
745.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
737.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
694.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
679.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
672.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
654.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
645.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
639.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
630.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
616.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
596.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
567.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
558.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
557.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
553.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
506.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
495.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
472.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
467.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
442.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
430.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
420.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
381.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
297.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
291.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
289.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
264.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
254.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
233.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
220.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
220.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
188.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
159.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
95.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
93.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
92.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
91.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
84.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
78.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
77.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
47.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
43.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
35.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
35.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
32.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
31.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
29.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
29.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
28.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
21.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
19.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
18.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
17.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
16.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
16.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
15.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
13.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
13.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
13.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
12.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
11.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
7.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
6.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
6.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
4.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NDUFA4L2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1271.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
3487.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
3203.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
3113.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
2654.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
2621.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
2484.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
2422.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
2370.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
2278.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
2273.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
2246.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
2236.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
2224.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
2153.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
2080.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
2080.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
2078.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
1944.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
1942.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
1876.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
1841.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
1834.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
1804.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
1803.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
1775.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
1748.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
1748.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
1728.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
1710.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
1678.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
1665.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
1643.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
1641.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
1635.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1623.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
1568.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
1549.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
1523.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
1504.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
1470.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
1460.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
1439.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
1421.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
1396.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
1369.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
1364.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
1352.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
1347.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
1328.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
1297.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
1281.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
1267.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
1249.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
1232.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
1224.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
1206.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
1151.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
1146.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
1142.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
1092.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
1053.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
1032.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
1025.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
1004.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
995.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
938.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
909.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
908.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
905.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
883.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
843.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
781.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
775.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
765.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
729.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
617.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
602.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
586.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
560.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
499.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
481.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
478.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
441.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
421.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
386.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
368.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
276.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
256.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
188.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
111.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
105.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
62.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
35.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
11.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
5.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
4.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
3.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NDUFA4L2 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
1507.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
1130.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
962.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
860.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
842.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
701.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
469.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
409.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
370.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
303.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
177.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
135.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
93.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
70.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
64.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
54.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
50.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
49.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
47.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
46.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
46.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
45.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
40.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
40.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
39.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
38.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
38.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
32.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
32.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
31.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
31.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
31.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
29.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
29.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
29.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
29.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
28.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
26.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
26.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
25.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
24.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
23.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
23.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
23.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
20.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
19.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
19.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
18.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
17.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
15.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
15.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
14.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
14.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
13.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
13.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
13.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
12.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
12.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
11.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
11.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
10.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
10.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
10.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
10.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
9.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
9.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
9.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
9.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
9.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
9.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
9.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
9.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
9.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
9.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
8.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
8.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
8.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
8.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
8.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
8.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
8.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
8.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
8.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
8.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
8.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
8.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
7.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
7.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
7.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
7.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
7.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
7.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
7.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
7.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
7.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
7.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
7.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
6.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
6.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
6.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
6.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
6.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
6.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
6.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
6.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
6.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
6.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
6.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
6.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
5.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
5.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
5.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
5.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
5.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
5.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
5.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
5.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
5.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
5.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
5.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
5.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
5.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
5.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
5.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
4.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
4.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
4.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
4.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
4.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
4.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
4.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
4.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
4.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
4.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
4.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
4.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
4.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
4.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
4.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
4.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
4.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
4.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
4.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
4.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
3.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
3.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
3.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
3.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
3.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
3.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
3.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
3.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
3.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
3.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
3.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
3.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
3.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
3.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
3.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
3.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
3.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
3.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
3.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
3.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
3.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
2.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
2.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
2.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
2.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
2.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
2.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
2.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
2.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
2.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
2.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
2.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
2.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
2.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
2.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
2.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
2.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
2.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
2.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
2.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
2.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
2.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
2.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
2.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
2.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
2.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
2.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
2.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
2.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
2.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
2.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
2.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
2.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
1.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
1.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
1.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
1.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
1.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
1.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
1.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
1.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
1.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
1.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
1.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
1.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
1.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
0.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0014450004
Tumor
2.9
CPT0024670003
Tumor
2.6
CPT0025880003
Tumor
2.2
CPT0001500009
Tumor
2.1
CPT0025050003
Tumor
2.0
CPT0012280003
Tumor
1.8
CPT0009000003
Tumor
1.6
CPT0000640003
Tumor
1.6
CPT0077110003
Tumor
1.6
CPT0020120003
Tumor
1.5
CPT0006440003
Tumor
1.5
CPT0079480003
Tumor
1.5
CPT0015730003
Tumor
1.5
CPT0087040003
Tumor
1.4
CPT0025110003
Tumor
1.4
CPT0012550003
Tumor
1.4
CPT0065810003
Tumor
1.4
CPT0069160003
Tumor
1.4
CPT0014160003
Tumor
1.4
CPT0088630003
Tumor
1.3
CPT0014370004
Tumor
1.3
CPT0001540009
Tumor
1.3
CPT0025350003
Tumor
1.3
CPT0071150004
Tumor
1.3
CPT0007860003
Tumor
1.3
CPT0001260009
Tumor
1.3
CPT0007320003
Tumor
1.3
CPT0081880003
Tumor
1.3
CPT0025290003
Tumor
1.2
CPT0023350003
Tumor
1.2
CPT0092160003
Tumor
1.2
CPT0012670003
Tumor
1.2
CPT0026410003
Tumor
1.1
CPT0063630003
Tumor
1.1
CPT0001180009
Tumor
1.1
CPT0086360003
Tumor
1.1
CPT0001340003
Tumor
1.1
CPT0088690003
Tumor
1.1
CPT0078930003
Tumor
1.1
CPT0063320003
Tumor
1.0
CPT0069000003
Tumor
1.0
CPT0085670003
Tumor
1.0
CPT0079270003
Tumor
1.0
CPT0006900003
Tumor
1.0
CPT0079230003
Tumor
1.0
CPT0086870003
Tumor
0.9
CPT0079410003
Tumor
0.9
CPT0078830003
Tumor
0.9
CPT0010110003
Tumor
0.8
CPT0089460004
Tumor
0.8
CPT0064370003
Tumor
0.8
CPT0086950003
Tumor
0.7
CPT0076330003
Tumor
0.7
CPT0065430003
Tumor
0.7
CPT0088480003
Tumor
0.7
CPT0000870016
Tumor
0.7
CPT0088900003
Tumor
0.7
CPT0077490003
Tumor
0.6
CPT0019130003
Tumor
0.6
CPT0089020003
Tumor
0.6
CPT0006630003
Tumor
0.6
CPT0012080003
Tumor
0.6
CPT0086030003
Tumor
0.6
CPT0025580004
Tumor
0.6
CPT0021240003
Tumor
0.6
CPT0000780007
Tumor
0.6
CPT0075130003
Tumor
0.6
CPT0065870003
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0012370003
Tumor
0.5
CPT0065690003
Tumor
0.5
CPT0081990003
Tumor
0.4
CPT0088760003
Tumor
0.3
CPT0078990003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0023690003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0015810003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0015910003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0078510003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0086820003
Tumor
-0.2
CPT0066480003
Tumor
-0.3
CPT0065750003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0010160003
Tumor
-0.5
CPT0011240003
Tumor
-0.9
CPT0017410003
Tumor
-1.2
CPT0092290003
Tumor
-1.2
CPT0077140001
Normal
-1.3
CPT0025170003
Tumor
-1.3
CPT0076350001
Normal
-1.6
CPT0079180003
Tumor
-1.7
CPT0024680001
Normal
-1.7
CPT0025230003
Tumor
-1.7
CPT0025920001
Normal
-1.8
CPT0007470001
Normal
-1.8
CPT0069190001
Normal
-1.8
CPT0088920001
Normal
-1.9
CPT0014470001
Normal
-2.0
CPT0084590001
Normal
-2.1
CPT0012770003
Normal
-2.1
CPT0092740003
Normal
-2.1
CPT0020130001
Normal
-2.1
CPT0086830003
Normal
-2.1
CPT0013790003
Normal
-2.1
CPT0088570001
Normal
-2.1
CPT0078940001
Normal
-2.1
CPT0089040001
Normal
-2.2
CPT0089480003
Normal
-2.2
CPT0081620001
Normal
-2.3
CPT0075170001
Normal
-2.3
CPT0006730001
Normal
-2.3
CPT0069010001
Normal
-2.3
CPT0088550004
Tumor
-2.3
CPT0000890001
Normal
-2.3
CPT0063330001
Normal
-2.4
CPT0088640003
Normal
-2.4
CPT0012570003
Normal
-2.5
CPT0078530001
Normal
-2.5
CPT0079300001
Normal
-2.5
CPT0000660001
Normal
-2.5
CPT0066430001
Normal
-2.6
CPT0092190003
Normal
-2.6
CPT0002270011
Tumor
-2.6
CPT0023360001
Normal
-2.7
CPT0088780001
Normal
-2.7
CPT0011410003
Tumor
-2.7
CPT0087050003
Normal
-2.7
CPT0002370001
Normal
-2.7
CPT0019160001
Normal
-2.8
CPT0088710001
Normal
-2.8
CPT0001270001
Normal
-2.8
CPT0079510001
Normal
-2.8
CPT0086890003
Normal
-2.8
CPT0001550001
Normal
-2.8
CPT0010120001
Normal
-2.9
CPT0009080003
Normal
-2.9
CPT0009020003
Normal
-2.9
CPT0086970003
Normal
-2.9
CPT0012180003
Tumor
-2.9
CPT0088500001
Normal
-2.9
CPT0079430001
Normal
-2.9
CPT0082010001
Normal
-3.0
CPT0078800003
Tumor
-3.0
CPT0065450001
Normal
-3.0
CPT0078660003
Tumor
-3.0
CPT0001190001
Normal
-3.1
CPT0063640001
Normal
-3.1
CPT0079000001
Normal
-3.1
CPT0078840001
Normal
-3.1
CPT0010170001
Normal
-3.1
CPT0023710001
Normal
-3.1
CPT0006950001
Normal
-3.2
CPT0092800003
Normal
-3.2
CPT0001510001
Normal
-3.2
CPT0001230001
Normal
-3.2
CPT0075570001
Normal
-3.2
CPT0064400001
Normal
-3.2
CPT0088970003
Tumor
-3.3
CPT0014350001
Normal
-3.3
CPT0012920003
Normal
-3.3
CPT0020020001
Normal
-3.3
CPT0066520001
Normal
-3.4
CPT0078670001
Normal
-3.4
CPT0065820001
Normal
-3.4
CPT0026420001
Normal
-3.4
CPT0000790001
Normal
-3.4
CPT0001350001
Normal
-3.4
CPT0006530001
Normal
-3.5
CPT0012290003
Normal
-3.5
CPT0025060001
Normal
-3.5
CPT0077320001
Normal
-3.5
CPT0092310003
Normal
-3.6
CPT0007870001
Normal
-3.6
CPT0017850003
Tumor
-3.6
CPT0077500001
Normal
-3.6
CPT0012090003
Normal
-3.7
CPT0025610001
Normal
-3.7
CPT0012640003
Normal
-3.8
CPT0018250001
Normal
-3.8
CPT0014130001
Normal
-4.1
CPT0017450001
Normal
-4.2
CPT0086370003
Normal
-4.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
