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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
METTL7A is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
130.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
459.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
424.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
417.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
399.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
399.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
389.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
385.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
359.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
355.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
337.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
327.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
322.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
321.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
320.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
318.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
315.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
315.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
315.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
308.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
305.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
302.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
301.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
300.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
300.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
294.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
291.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
287.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
270.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
269.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
266.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
265.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
262.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
261.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
260.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
255.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
253.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
251.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
251.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
249.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
249.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
247.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
245.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
243.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
241.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
240.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
239.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
236.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
236.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
234.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
231.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
230.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
229.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
228.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
223.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
219.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
219.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
218.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
217.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
215.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
214.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
213.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
212.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
211.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
210.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
210.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
209.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
209.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
208.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
204.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
201.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
200.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
198.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
197.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
197.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
196.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
196.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
196.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
195.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
195.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
192.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
192.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
191.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
190.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
185.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
184.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
184.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
184.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
183.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
181.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
181.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
180.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
179.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
179.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
179.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
179.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
178.9
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
178.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
177.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
176.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
176.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
176.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
174.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
173.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
172.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
172.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
171.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
170.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
170.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
166.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
166.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
165.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
164.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
164.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
164.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
162.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
156.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
156.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
156.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
153.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
151.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
151.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
150.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
150.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
150.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
149.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
147.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
147.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
146.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
146.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
146.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
145.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
143.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
143.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
143.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
141.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
141.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
140.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
139.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
139.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
139.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
139.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
137.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
137.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
137.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
136.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
135.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
134.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
133.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
133.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
132.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
132.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
132.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
130.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
128.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
127.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
127.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
127.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
124.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
123.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
123.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
122.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
122.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
122.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
122.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
120.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
120.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
119.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
119.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
119.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
118.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
118.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
117.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
116.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
116.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
115.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
114.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
114.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
114.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
114.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
113.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
112.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
112.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
112.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
112.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
111.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
111.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
111.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
111.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
110.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
109.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
109.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
108.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
108.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
108.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
107.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
107.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
106.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
105.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
105.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
102.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
100.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
100.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
99.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
99.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
99.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
98.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
98.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
98.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
96.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
96.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
96.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
96.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
95.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
94.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
93.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
93.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
93.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
92.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
92.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
92.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
91.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
91.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
89.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
89.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
89.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
88.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
88.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
87.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
86.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
86.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
85.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
84.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
84.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
84.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
82.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
81.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
79.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
79.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
79.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
78.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
78.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
77.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
75.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
73.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
73.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
73.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
72.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
72.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
70.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
69.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
69.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
68.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
68.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
68.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
67.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
67.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
67.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
67.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
67.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
66.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
65.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
65.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
64.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
63.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
63.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
63.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
63.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
63.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
61.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
60.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
59.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
59.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
58.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
58.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
57.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
57.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
57.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
56.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
55.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
54.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
53.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
52.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
52.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
51.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
51.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
50.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
49.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
49.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
49.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
48.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
48.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
48.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
48.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
47.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
47.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
46.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
46.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
45.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
44.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
44.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
41.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
41.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
40.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
40.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
40.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
39.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
39.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
39.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
38.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
38.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
38.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
38.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
37.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
36.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
36.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
35.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
35.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
35.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
34.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
34.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
33.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
33.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
33.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
33.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
31.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
30.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
29.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
29.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
29.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
29.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
28.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
27.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
27.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
27.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
26.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
25.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
24.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
24.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
24.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
23.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
23.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
22.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
22.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
21.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
20.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
20.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
20.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
18.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
18.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
17.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
14.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
14.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
13.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
13.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
10.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
9.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
8.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
8.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
7.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
6.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
5.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
METTL7A is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
121.7
Number of samples
231
Samples
Sample
Description
TPM
DO48727
0 years, female, NA, stage:2, dead, 390 days
505.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
404.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
313.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
300.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
283.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
283.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
273.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
267.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
266.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
247.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
240.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
239.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
235.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
232.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
224.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
223.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
218.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
215.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
213.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
212.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
211.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
209.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
201.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
201.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
201.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
197.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
194.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
194.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
193.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
192.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
191.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
191.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
188.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
187.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
185.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
184.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
184.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
183.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
183.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
183.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
182.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
181.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
180.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
179.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
178.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
177.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
176.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
173.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
172.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
170.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
170.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
169.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
166.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
166.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
164.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
164.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
163.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
162.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
161.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
159.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
157.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
157.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
157.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
156.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
155.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
152.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
152.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
152.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
150.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
149.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
148.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
147.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
147.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
146.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
146.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
145.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
143.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
143.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
142.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
142.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
141.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
141.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
140.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
140.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
140.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
140.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
137.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
137.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
136.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
136.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
135.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
134.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
134.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
132.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
132.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
132.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
131.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
131.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
128.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
126.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
125.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
122.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
121.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
121.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
119.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
119.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
119.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
118.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
117.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
117.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
117.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
117.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
115.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
114.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
114.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
114.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
113.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
112.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
112.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
110.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
110.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
108.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
108.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
107.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
107.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
105.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
105.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
105.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
104.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
103.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
102.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
101.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
101.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
101.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
101.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
100.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
99.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
97.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
96.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
96.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
95.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
94.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
93.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
92.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
91.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
91.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
90.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
89.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
89.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
85.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
85.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
85.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
85.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
84.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
83.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
83.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
83.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
82.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
81.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
80.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
80.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
79.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
79.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
79.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
78.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
78.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
78.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
77.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
76.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
76.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
76.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
76.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
75.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
75.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
74.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
73.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
73.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
73.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
72.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
72.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
70.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
69.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
66.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
64.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
64.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
64.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
63.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
63.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
62.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
61.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
61.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
60.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
59.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
58.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
57.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
57.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
57.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
57.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
55.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
52.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
49.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
47.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
47.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
47.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
47.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
43.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
41.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
40.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
40.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
39.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
39.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
36.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
35.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
30.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
29.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
29.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
21.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
21.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
20.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
17.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
17.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
17.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
15.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
13.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
10.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
8.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
8.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
7.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
4.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
744
Normal
1.2
342
Normal
1.2
636
Normal
0.9
128
Normal
0.9
452
Normal
0.8
746
Normal
0.7
298
Normal
0.7
426
Normal
0.6
465
Tumor
0.6
376
Normal
0.6
698
Normal
0.6
648
Normal
0.6
882
Normal
0.6
354
Normal
0.6
742
Normal
0.6
862
Normal
0.6
666
Normal
0.6
466
Normal
0.6
568
Normal
0.6
332
Normal
0.6
938
Normal
0.6
186
Normal
0.5
867
Tumor
0.5
358
Normal
0.5
741
Tumor
0.5
422
Normal
0.5
1022
Normal
0.5
366
Normal
0.5
866
Normal
0.5
232
Normal
0.5
484
Normal
0.5
114
Normal
0.5
162
Normal
0.5
196
Normal
0.5
878
Normal
0.5
314
Normal
0.5
824
Normal
0.5
414
Normal
0.5
172
Normal
0.5
388
Normal
0.5
258
Normal
0.5
488
Normal
0.5
124
Normal
0.5
818
Normal
0.5
672
Normal
0.5
778
Normal
0.5
738
Normal
0.5
428
Normal
0.5
111
Normal
0.5
394
Normal
0.5
352
Normal
0.5
462
Normal
0.4
618
Normal
0.4
436
Normal
0.4
642
Normal
0.4
723
Tumor
0.4
1027
Tumor
0.4
664
Normal
0.4
816
Normal
0.4
412
Normal
0.4
392
Normal
0.4
628
Normal
0.4
915
Tumor
0.4
456
Normal
0.4
356
Normal
0.4
435
Tumor
0.4
222
Normal
0.4
132
Normal
0.4
272
Normal
0.4
142
Normal
0.4
148
Normal
0.4
424
Normal
0.4
912
Normal
0.4
127
Tumor
0.4
864
Normal
0.4
228
Normal
0.4
464
Normal
0.4
954
Normal
0.3
278
Normal
0.3
944
Normal
0.3
344
Normal
0.3
662
Normal
0.3
468
Normal
0.3
538
Normal
0.3
976
Normal
0.3
1014
Normal
0.3
137
Tumor
0.3
384
Normal
0.3
858
Normal
0.3
138
Normal
0.3
481
Tumor
0.3
261
Tumor
0.3
572
Normal
0.3
616
Normal
0.3
262
Normal
0.3
446
Normal
0.3
1046
Normal
0.3
924
Normal
0.3
112
Tumor
0.3
911
Tumor
0.3
554
Normal
0.3
448
Normal
0.3
715
Tumor
0.3
286
Normal
0.3
432
Normal
0.3
564
Normal
0.2
362
Normal
0.2
363
Tumor
0.2
756
Normal
0.2
1032
Normal
0.2
786
Normal
0.2
1044
Normal
0.2
214
Normal
0.2
981
Tumor
0.2
518
Normal
0.2
482
Normal
0.2
546
Normal
0.2
922
Normal
0.2
952
Normal
0.2
574
Normal
0.2
1028
Normal
0.2
284
Normal
0.2
874
Normal
0.2
982
Normal
0.2
714
Normal
0.2
396
Normal
0.1
964
Normal
0.1
968
Normal
0.1
695
Tumor
0.1
1026
Normal
0.1
494
Normal
0.1
474
Normal
0.1
171
Tumor
0.1
472
Normal
0.1
966
Normal
0.1
146
Normal
0.1
955
Tumor
0.1
268
Normal
0.1
534
Normal
0.1
423
Tumor
0.1
123
Tumor
0.1
722
Normal
0.1
984
Normal
0.1
956
Normal
0.1
1016
Normal
0.1
218
Normal
0.1
558
Normal
0.0
696
Normal
0.0
852
Normal
0.0
126
Normal
0.0
136
Normal
0.0
386
Normal
0.0
728
Normal
0.0
918
Normal
0.0
364
Normal
0.0
328
Normal
0.0
716
Normal
0.0
312
Normal
0.0
526
Normal
0.0
231
Tumor
0.0
868
Normal
0.0
224
Normal
0.0
516
Normal
0.0
227
Tumor
0.0
368
Normal
0.0
528
Normal
0.0
863
Tumor
0.0
434
Normal
0.0
461
Tumor
-0.1
884
Normal
-0.1
445
Tumor
-0.1
977
Tumor
-0.1
357
Tumor
-0.1
745
Tumor
-0.1
1043
Tumor
-0.1
393
Tumor
-0.1
958
Normal
-0.1
857
Tumor
-0.1
487
Tumor
-0.1
492
Normal
-0.1
498
Normal
-0.1
914
Normal
-0.1
444
Normal
-0.1
212
Normal
-0.1
926
Normal
-0.1
257
Tumor
-0.1
147
Tumor
-0.1
188
Normal
-0.1
365
Tumor
-0.1
1041
Tumor
-0.2
1013
Tumor
-0.2
1042
Normal
-0.2
431
Tumor
-0.2
161
Tumor
-0.2
478
Normal
-0.2
873
Tumor
-0.2
755
Tumor
-0.2
627
Tumor
-0.2
451
Tumor
-0.2
271
Tumor
-0.2
785
Tumor
-0.2
615
Tumor
-0.2
916
Normal
-0.2
514
Normal
-0.3
267
Tumor
-0.3
421
Tumor
-0.3
978
Normal
-0.3
145
Tumor
-0.3
416
Normal
-0.3
192
Normal
-0.3
411
Tumor
-0.3
187
Tumor
-0.3
921
Tumor
-0.3
913
Tumor
-0.3
113
Tumor
-0.3
861
Tumor
-0.3
635
Tumor
-0.3
665
Tumor
-0.3
433
Tumor
-0.3
217
Tumor
-0.3
524
Normal
-0.4
477
Tumor
-0.4
141
Tumor
-0.4
185
Tumor
-0.4
851
Tumor
-0.4
391
Tumor
-0.4
515
Tumor
-0.4
361
Tumor
-0.4
413
Tumor
-0.4
527
Tumor
-0.4
727
Tumor
-0.4
617
Tumor
-0.5
191
Tumor
-0.5
647
Tumor
-0.5
686
Normal
-0.5
353
Tumor
-0.5
567
Tumor
-0.5
663
Tumor
-0.5
571
Tumor
-0.5
195
Tumor
-0.5
387
Tumor
-0.5
517
Tumor
-0.5
367
Tumor
-0.5
537
Tumor
-0.6
823
Tumor
-0.6
883
Tumor
-0.6
221
Tumor
-0.6
415
Tumor
-0.6
813
Tumor
-0.6
713
Tumor
-0.6
963
Tumor
-0.6
341
Tumor
-0.6
737
Tumor
-0.6
777
Tumor
-0.6
223
Tumor
-0.6
937
Tumor
-0.6
455
Tumor
-0.6
721
Tumor
-0.6
313
Tumor
-0.6
463
Tumor
-0.6
483
Tumor
-0.6
297
Tumor
-0.6
471
Tumor
-0.7
563
Tumor
-0.7
131
Tumor
-0.7
327
Tumor
-0.7
641
Tumor
-0.7
1045
Tumor
-0.7
443
Tumor
-0.7
285
Tumor
-0.7
331
Tumor
-0.7
491
Tumor
-0.7
536
Normal
-0.7
953
Tumor
-0.7
553
Tumor
-0.8
881
Tumor
-0.8
943
Tumor
-0.8
923
Tumor
-0.8
467
Tumor
-0.8
135
Tumor
-0.8
814
Normal
-0.8
125
Tumor
-0.8
523
Tumor
-0.8
1015
Tumor
-0.8
493
Tumor
-0.8
975
Tumor
-0.8
513
Tumor
-0.8
355
Tumor
-0.9
1025
Tumor
-0.9
447
Tumor
-0.9
277
Tumor
-0.9
383
Tumor
-0.9
557
Tumor
-0.9
697
Tumor
-0.9
375
Tumor
-0.9
473
Tumor
-1.0
967
Tumor
-1.0
1031
Tumor
-1.0
815
Tumor
-1.0
671
Tumor
-1.0
965
Tumor
-1.0
877
Tumor
-1.0
983
Tumor
-1.1
957
Tumor
-1.1
533
Tumor
-1.1
343
Tumor
-1.2
743
Tumor
-1.2
545
Tumor
-1.2
213
Tumor
-1.2
724
Normal
-1.2
925
Tumor
-1.2
427
Tumor
-1.2
311
Tumor
-1.2
865
Tumor
-1.3
425
Tumor
-1.3
535
Tumor
-1.3
917
Tumor
-1.3
497
Tumor
-1.3
817
Tumor
-1.3
283
Tumor
-1.3
395
Tumor
-1.4
351
Tumor
-1.4
951
Tumor
-1.5
525
Tumor
-1.6
1021
Tumor
-1.6
385
Tumor
-1.7
211
Tumor
-1.7
661
Tumor
-1.8
573
Tumor
-1.9
685
Tumor
-2.4
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.