HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:34.5 nTPM
HPA Brain:123.6 nTPM
GTEx:34.5 nTPM
FANTOM5:186.3 Scaled Tags Per Million
Pig:1.0 nTPM
Mouse:0.1 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 123.6
Sample id Sample description nTPM
Hippocampus
nTPM: 123.6
1855 Male, age 76, left hemisphere 147.1
1911 Female, age 85, right hemisphere 130.6
2529 Female, age 94, left hemisphere 125.2
2148 Female, age 91, left hemisphere 116.5
1898 Male, age 80, left hemisphere 115.4
2621 Female, age 67, right hemisphere 106.7
Dentate gyrus
nTPM: 95.7
2528 Male, age 74, both hemispheres 119.1
2246 Female, age 85, both hemispheres 112.7
2010 Male, age 76, both hemispheres 111.4
1927 Female, age 91, both hemispheres 90.4
2530 Female, age 94, left hemisphere 70.7
2531 Female, age 67, both hemispheres 69.7
Entorhinal gyrus
nTPM: 99.9
2117 Female, age 91, right hemisphere 146.9
1938 Female, age 85, left hemisphere 114.1
2686 Male, age 75, right hemisphere 93.8
1787 Male, age 76, left hemisphere 93.7
2764 Male, age 80, right hemisphere 81.8
2613 Female, age 94, left hemisphere 69.0
Hippocampus, CA1
nTPM: 109.4
2527 Male, age 74, both hemispheres 131.9
1873 Female, age 85, both hemispheres 123.6
2082 Female, age 91, right hemisphere 119.8
2045 Male, age 76, both hemispheres 98.7
2749 Male, age 80, left hemisphere 72.9
Hippocampus, CA2
nTPM: 110.8
2249 Male, age 74, both hemispheres 137.4
1940 Female, age 85, left hemisphere 136.9
2113 Female, age 91, right hemisphere 126.0
1963 Male, age 80, left hemisphere 95.9
2437 Female, age 94, left hemisphere 90.2
1892 Male, age 76, both hemispheres 78.5
Hippocampus, CA3
nTPM: 103.3
2436 Male, age 74, both hemispheres 146.1
1891 Female, age 85, both hemispheres 123.2
1867 Male, age 76, both hemispheres 99.0
2861 Female, age 67, both hemispheres 93.2
2620 Female, age 94, left hemisphere 84.1
2137 Male, age 80, left hemisphere 74.0
Parahippocampal cortex
nTPM: 102.8
2622 Female, age 67, right hemisphere 121.1
2692 Male, age 74, both hemispheres 120.9
1933 Female, age 85, both hemispheres 113.8
2250 Female, age 67, right hemisphere 109.7
2018 Male, age 76, both hemispheres 103.1
2245 Female, age 91, both hemispheres 98.6
1990 Female, age 91, right hemisphere 96.0
1850 Male, age 80, both hemispheres 91.4
2693 Female, age 94, both hemispheres 90.1
2532 Female, age 72, left hemisphere 83.1
Perirhinal gyrus
nTPM: 91.0
1847 Female, age 91, left hemisphere 99.3
1841 Female, age 85, right hemisphere 94.5
1794 Male, age 80, right hemisphere 92.1
2521 Female, age 94, right hemisphere 91.6
2848 Male, age 76, right hemisphere 77.4
Subiculum
nTPM: 114.5
2619 Male, age 74, both hemispheres 136.7
2729 Female, age 91, right hemisphere 136.1
2042 Male, age 76, both hemispheres 115.1
2438 Female, age 94, left hemisphere 105.6
1901 Male, age 80, both hemispheres 103.2
1977 Female, age 85, both hemispheres 90.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 34.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.5
Samples: 197

Max nTPM: 86.5
Min nTPM: 9.2
Std nTPM: 15.8
Median nTPM: 31.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 86.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 82.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 79.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 79.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 75.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 75.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 72.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 71.2
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 69.8
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 66.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 63.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 186.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 186.3
FF:10153-102I9 76 years, female 234.6
FF:10169-103B7 60 years, female 138.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1.0
Pig sample Sample description nTPM
Subiculum
nTPM: 0.8
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.4
Sample A Female 1.0
Sample B Female 0.6
Sample C Male 1.3
Sample D Male 0.4
Dorsal hippocampus
nTPM: 0.7
Samples: 4

Max nTPM: 1.6
Min nTPM: 0.1
Sample A Female 1.6
Sample B Female 0.4
Sample C Male 0.8
Sample D Male 0.1
Entorhinal cortex
nTPM: 0.6
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.4
Sample A Female 0.9
Sample B Female 0.5
Sample C Male 0.4
Sample D Male 0.4
Ventral hippocampus
nTPM: 1.0
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.6
Sample A Female 1.3
Sample B Female 0.7
Sample C Male 1.4
Sample D Male 0.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.0
Samples: 4

Max nTPM: 36.5
Min nTPM: 27.5
Sample A Male 28.3
Sample B Male 27.8
Sample C Female 36.5
Sample D Female 27.5
Hippocampal formation
nTPM: 40.9
Samples: 4

Max nTPM: 44.9
Min nTPM: 38.3
Sample A Male 39.1
Sample B Male 38.3
Sample C Female 41.4
Sample D Female 44.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
68798019 Antisense, RP_050215_01_F03, Mouse strain C57BL/6J (56 days, male) 4.0
70919931 Antisense, RP_050713_02_D02, Mouse strain C57BL/6J (56 days, male) 0.3
Hippocampal formation
Expression energy: 4.0
68798019 Antisense, RP_050215_01_F03, Mouse strain C57BL/6J (56 days, male) 4.0
70919931 Antisense, RP_050713_02_D02, Mouse strain C57BL/6J (56 days, male) 0.3
Hippocampal formation
Expression energy: 4.0
68798019 Antisense, RP_050215_01_F03, Mouse strain C57BL/6J (56 days, male) 4.0
70919931 Antisense, RP_050713_02_D02, Mouse strain C57BL/6J (56 days, male) 0.3

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