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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
50.5
nTPM
HPA Brain:
148.6
nTPM
GTEx:
50.5
nTPM
FANTOM5:
183.6
Scaled Tags Per Million
Pig:
0.6
nTPM
Mouse:
0.1
nTPM
Allen mouse:
3.9
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
148.6
Sample id
Sample description
nTPM
Amygdala nTPM: 148.6
2514
Male, age 75, right hemisphere
180.4
1987
Female, age 91, left hemisphere
151.4
2814
Male, age 76, right hemisphere
151.1
2695
Female, age 67, right hemisphere
147.2
2517
Female, age 94, left hemisphere
112.7
Basal amygdala nTPM: 123.6
2609
Male, age 75, right hemisphere
186.7
1955
Male, age 76, both hemispheres
141.3
2243
Female, age 91, right hemisphere
125.1
2110
Male, age 80, left hemisphere
123.6
2685
Female, age 94, left hemisphere
98.6
2827
Female, age 67, right hemisphere
66.4
Central amygdala nTPM: 134.1
2515
Male, age 75, right hemisphere
178.8
1905
Male, age 76, both hemispheres
140.5
2701
Female, age 91, right hemisphere
136.5
2239
Male, age 80, left hemisphere
120.3
2826
Female, age 94, left hemisphere
94.2
Corticomedial amygdala nTPM: 129.0
2428
Male, age 75, right hemisphere
198.6
2829
Male, age 80, left hemisphere
135.1
2242
Female, age 91, right hemisphere
124.8
2240
Male, age 76, both hemispheres
121.5
2429
Female, age 94, left hemisphere
118.4
2535
Female, age 67, right hemisphere
75.5
Lateral amygdala nTPM: 118.9
2516
Male, age 75, right hemisphere
167.6
1883
Male, age 76, both hemispheres
144.3
2255
Female, age 91, right hemisphere
128.8
2256
Male, age 80, left hemisphere
119.0
2534
Female, age 94, left hemisphere
85.6
2830
Female, age 67, right hemisphere
67.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
50.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 50.5
Samples: 152
Max nTPM: 109.6
Min nTPM: 5.4
Std nTPM: 22.8
Median nTPM: 49.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
109.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
103.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
101.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
99.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
98.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
97.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
92.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
91.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
88.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
88.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
88.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
87.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
85.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
85.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
84.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
82.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
82.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
82.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
81.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
80.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
79.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
79.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
78.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
77.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
75.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
75.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
74.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
73.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
72.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
72.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
71.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
70.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
70.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
67.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
67.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
66.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
66.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
66.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
64.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
63.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
63.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
63.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
62.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
62.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
62.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
61.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
61.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
60.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
59.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
59.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
58.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
58.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
57.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
56.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
56.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
55.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
55.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
55.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
55.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
54.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
54.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
53.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
53.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
52.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
52.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
51.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
51.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
51.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
51.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
51.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
51.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
51.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
50.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
50.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
49.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
49.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
48.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
47.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
47.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
47.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
47.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
46.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
46.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
46.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
46.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
45.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
45.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
44.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
44.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
43.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
43.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
43.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
42.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
42.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
42.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
41.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
41.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
40.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
39.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
39.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
38.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
38.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
38.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
37.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
36.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
36.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
36.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
35.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
34.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
34.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
33.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
33.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
33.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
33.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
32.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
32.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
31.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
30.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
30.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
30.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
30.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
30.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
30.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
29.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
28.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
28.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
27.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
27.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
26.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
25.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
24.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
23.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
22.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
22.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
22.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
21.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
21.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
21.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
20.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
19.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
19.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
19.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
18.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
17.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
17.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
16.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
15.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
13.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
13.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
12.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
8.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
5.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
0.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 28.3
Samples: 4
Max nTPM: 30.8
Min nTPM: 25.3
Sample A
Male
28.4
Sample B
Male
30.8
Sample C
Female
25.3
Sample D
Female
28.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.