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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SIGIRR is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
215.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
194.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
184.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
167.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
123.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
103.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
91.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
81.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
81.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
80.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
79.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
78.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
76.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
75.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
72.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
72.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
69.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
68.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
68.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
66.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
64.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
63.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
62.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
61.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
58.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
58.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
57.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
56.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
55.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
55.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
54.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
51.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
50.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
47.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
47.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
46.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
45.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
44.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
44.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
42.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
41.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
40.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
40.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
37.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
37.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
36.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
34.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
31.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
30.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
28.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
28.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
27.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
26.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
24.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
24.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
19.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
5.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
3.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
3.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SIGIRR is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
148.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
101.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
88.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
83.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
82.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
81.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
77.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
63.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
61.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
60.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
57.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
56.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
48.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
48.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
47.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
47.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
47.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
46.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
46.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
46.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
45.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
43.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
43.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
43.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
42.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
41.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
41.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
41.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
41.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
41.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
40.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
40.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
39.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
38.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
38.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
37.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
37.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
37.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
37.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
37.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
37.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
36.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
36.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
35.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
35.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
35.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
35.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
35.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
35.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
35.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
34.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
34.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
33.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
33.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
33.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
33.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
33.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
32.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
32.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
32.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
32.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
32.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
32.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
32.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
31.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
31.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
31.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
31.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
31.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
30.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
30.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
30.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
30.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
30.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
30.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
30.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
30.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
30.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
29.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
29.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
29.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
29.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
29.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
28.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
28.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
28.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
28.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
28.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
28.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
27.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
27.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
27.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
27.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
27.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
27.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
27.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
27.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
27.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
27.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
26.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
26.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
26.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
26.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
26.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
26.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
26.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
26.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
26.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
26.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
26.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
25.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
25.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
25.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
25.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
25.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
25.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
25.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
25.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
25.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
25.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
25.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
24.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
24.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
24.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
24.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
24.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
24.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
24.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
24.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
24.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
24.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
24.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
24.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
24.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
24.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
24.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
24.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
23.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
23.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
23.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
23.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
23.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
23.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
23.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
23.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
23.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
23.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
23.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
23.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
22.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
22.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
22.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
22.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
22.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
22.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
22.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
22.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
22.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
22.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
21.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
21.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
21.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
21.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
21.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
21.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
21.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
21.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
21.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
21.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
21.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
21.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
21.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
21.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
21.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
21.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
21.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
21.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
21.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
21.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
21.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
21.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
21.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
21.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
21.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
21.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
21.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
21.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
20.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
20.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
20.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
20.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
20.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
20.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
20.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
20.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
20.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
20.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
20.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
19.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
19.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
19.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
19.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
19.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
19.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
19.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
19.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
19.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
19.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
19.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
19.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
19.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
19.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
19.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
19.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
19.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
19.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
19.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
18.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
18.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
18.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
18.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
18.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
18.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
18.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
18.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
18.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
18.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
18.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
18.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
18.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
18.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
18.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
17.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
17.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
17.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
17.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
17.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
17.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
17.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
17.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
17.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
17.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
17.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
17.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
17.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
17.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
17.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
17.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
17.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
17.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
17.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
17.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
16.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
16.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
16.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
16.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
16.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
16.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
16.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
16.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
16.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
16.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
16.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
16.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
16.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
16.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
15.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
15.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
15.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
15.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
15.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
15.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
15.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
15.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
15.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
15.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
15.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
15.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
15.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
15.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
15.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
15.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
15.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
15.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
15.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
15.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
15.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
15.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
14.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
14.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
14.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
14.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
14.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
14.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
14.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
14.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
14.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
14.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
14.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
14.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
14.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
14.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
14.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
14.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
14.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
14.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
14.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
14.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
14.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
13.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
13.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
13.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
13.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
13.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
13.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
13.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
13.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
13.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
13.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
13.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
13.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
13.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
12.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
12.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
12.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
12.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
12.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
12.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
12.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
12.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
12.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
12.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
12.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
12.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
11.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
11.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
11.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
11.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
11.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
11.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
11.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
11.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
11.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
10.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
10.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
10.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
10.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
10.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
10.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
10.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
10.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
10.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
9.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
9.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
9.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
9.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
9.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
9.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
9.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
8.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
8.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
8.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
8.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
8.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
8.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
8.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
8.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
8.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
8.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
8.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
7.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
7.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
7.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
7.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
7.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
7.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
7.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
7.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
6.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
6.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
6.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
6.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
6.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
5.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
5.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
5.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
4.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
4.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
3.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
3.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
3.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
3.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
2.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
2.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
1.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SIGIRR is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
53.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
45.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
38.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
37.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
37.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
36.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
35.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
35.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
32.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
31.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
31.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
26.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
25.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
24.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
23.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
23.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
22.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
22.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
22.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
22.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
22.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
22.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
22.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
21.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
20.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
20.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
20.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
20.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
19.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
19.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
19.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
19.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
19.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
19.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
19.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
18.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
18.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
18.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
17.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
17.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
17.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
17.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
17.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
16.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
16.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
16.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
16.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
16.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
16.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
15.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
15.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
14.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
14.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
14.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
14.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
13.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
13.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
12.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
12.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
12.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
12.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
11.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
11.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
11.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
10.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
10.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
10.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
10.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
9.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
9.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
9.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
9.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
9.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
8.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
7.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
7.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
7.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
7.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
6.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
6.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
5.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
5.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SIGIRR is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
310.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
214.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
201.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
153.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
124.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
115.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
110.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
105.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
105.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
103.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
103.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
102.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
101.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
99.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
99.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
98.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
95.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
93.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
90.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
88.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
83.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
81.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
78.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
78.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
78.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
78.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
77.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
77.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
76.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
73.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
72.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
71.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
70.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
70.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
69.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
68.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
67.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
65.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
65.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
65.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
64.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
62.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
62.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
61.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
60.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
58.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
57.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
57.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
56.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
56.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
55.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
55.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
55.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
55.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
53.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
53.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
53.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
51.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
51.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
51.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
51.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
50.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
50.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
49.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
48.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
48.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
48.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
47.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
47.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
47.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
47.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
46.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
45.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
45.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
45.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
44.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
44.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
44.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
44.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
43.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
43.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
43.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
42.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
42.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
42.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
42.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
42.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
42.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
42.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
42.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
42.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
41.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
41.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
41.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
41.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
41.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
41.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
40.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
40.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
40.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
39.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
39.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
38.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
38.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
38.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
38.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
37.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
37.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
37.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
37.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
37.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
37.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
37.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
37.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
37.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
36.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
36.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
36.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
36.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
35.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
35.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
35.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
35.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
34.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
34.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
34.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
33.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
33.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
33.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
32.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
32.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
32.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
32.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
32.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
32.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
32.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
31.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
31.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
31.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
31.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
31.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
31.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
30.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
30.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
30.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
29.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
29.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
29.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
29.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
29.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
29.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
28.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
28.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
28.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
28.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
28.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
27.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
27.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
27.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
27.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
26.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
26.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
26.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
26.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
26.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
25.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
25.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
24.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
24.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
24.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
24.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
24.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
24.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
24.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
23.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
23.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
23.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
23.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
23.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
23.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
23.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
23.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
23.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
23.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
23.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
22.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
22.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
22.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
21.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
21.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
21.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
21.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
20.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
20.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
20.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
20.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
20.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
19.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
19.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
19.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
19.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
18.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
18.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
18.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
18.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
18.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
17.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
17.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
17.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
17.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
16.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
16.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
16.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
16.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
16.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
16.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
15.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
15.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
15.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
14.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
14.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
14.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
13.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
13.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
13.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
12.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
10.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
10.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
9.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
9.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
8.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
8.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
8.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
8.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
7.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
7.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
7.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
7.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
7.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
7.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
7.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
6.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
5.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
5.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
4.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
4.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
4.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
3.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
3.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
2.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
2.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078660003
Tumor
1.3
CPT0092740003
Normal
1.3
CPT0079180003
Tumor
1.2
CPT0006950001
Normal
1.1
CPT0026420001
Normal
1.1
CPT0092800003
Normal
1.0
CPT0023710001
Normal
1.0
CPT0078840001
Normal
0.9
CPT0065450001
Normal
0.9
CPT0066430001
Normal
0.9
CPT0092310003
Normal
0.9
CPT0014350001
Normal
0.9
CPT0020020001
Normal
0.9
CPT0000790001
Normal
0.9
CPT0081620001
Normal
0.9
CPT0088640003
Normal
0.8
CPT0088710001
Normal
0.8
CPT0087050003
Normal
0.8
CPT0089480003
Normal
0.8
CPT0001510001
Normal
0.7
CPT0076350001
Normal
0.7
CPT0077140001
Normal
0.7
CPT0007870001
Normal
0.7
CPT0064400001
Normal
0.7
CPT0025060001
Normal
0.7
CPT0017450001
Normal
0.7
CPT0012770003
Normal
0.7
CPT0077500001
Normal
0.6
CPT0001350001
Normal
0.6
CPT0025610001
Normal
0.6
CPT0079000001
Normal
0.6
CPT0065820001
Normal
0.6
CPT0079430001
Normal
0.6
CPT0088780001
Normal
0.6
CPT0010170001
Normal
0.6
CPT0001230001
Normal
0.6
CPT0006730001
Normal
0.5
CPT0088920001
Normal
0.5
CPT0086830003
Normal
0.5
CPT0078940001
Normal
0.5
CPT0000890001
Normal
0.5
CPT0086890003
Normal
0.5
CPT0089040001
Normal
0.5
CPT0082010001
Normal
0.5
CPT0001550001
Normal
0.5
CPT0079300001
Normal
0.5
CPT0023360001
Normal
0.5
CPT0075570001
Normal
0.5
CPT0012090003
Normal
0.5
CPT0012290003
Normal
0.5
CPT0014130001
Normal
0.5
CPT0086370003
Normal
0.5
CPT0009080003
Normal
0.5
CPT0063640001
Normal
0.5
CPT0066520001
Normal
0.4
CPT0063330001
Normal
0.4
CPT0013790003
Normal
0.4
CPT0007470001
Normal
0.4
CPT0069010001
Normal
0.4
CPT0025920001
Normal
0.4
CPT0006530001
Normal
0.4
CPT0000660001
Normal
0.3
CPT0078670001
Normal
0.3
CPT0012640003
Normal
0.3
CPT0019160001
Normal
0.3
CPT0088500001
Normal
0.3
CPT0002370001
Normal
0.3
CPT0001190001
Normal
0.3
CPT0069190001
Normal
0.3
CPT0020130001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0078530001
Normal
0.2
CPT0014470001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0086970003
Normal
0.1
CPT0088570001
Normal
0.1
CPT0075170001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0018250001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0065750003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0078800003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0092190003
Normal
-0.3
CPT0001500009
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0065810003
Tumor
-0.4
CPT0064370003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0011240003
Tumor
-0.4
CPT0089460004
Tumor
-0.5
CPT0077310003
Tumor
-0.5
CPT0092730003
Tumor
-0.5
CPT0025580004
Tumor
-0.5
CPT0007320003
Tumor
-0.5
CPT0086030003
Tumor
-0.5
CPT0075560003
Tumor
-0.5
CPT0086870003
Tumor
-0.5
CPT0006630003
Tumor
-0.5
CPT0025290003
Tumor
-0.5
CPT0001220008
Tumor
-0.5
CPT0087040003
Tumor
-0.6
CPT0081600003
Tumor
-0.6
CPT0076330003
Tumor
-0.6
CPT0015910003
Tumor
-0.6
CPT0063630003
Tumor
-0.6
CPT0010110003
Tumor
-0.6
CPT0020120003
Tumor
-0.7
CPT0079230003
Tumor
-0.7
CPT0078930003
Tumor
-0.7
CPT0079480003
Tumor
-0.7
CPT0065430003
Tumor
-0.7
CPT0066480003
Tumor
-0.7
CPT0000780007
Tumor
-0.7
CPT0079270003
Tumor
-0.7
CPT0014160003
Tumor
-0.7
CPT0000870016
Tumor
-0.7
CPT0078510003
Tumor
-0.7
CPT0006900003
Tumor
-0.7
CPT0089020003
Tumor
-0.7
CPT0081990003
Tumor
-0.7
CPT0088760003
Tumor
-0.8
CPT0075720003
Tumor
-0.8
CPT0012370003
Tumor
-0.8
CPT0014370004
Tumor
-0.8
CPT0025350003
Tumor
-0.8
CPT0012900004
Tumor
-0.8
CPT0092290003
Tumor
-0.9
CPT0088480003
Tumor
-0.9
CPT0010160003
Tumor
-0.9
CPT0079380003
Tumor
-0.9
CPT0086360003
Tumor
-0.9
CPT0066470004
Tumor
-0.9
CPT0001180009
Tumor
-0.9
CPT0084560003
Tumor
-0.9
CPT0088900003
Tumor
-1.0
CPT0015810003
Tumor
-1.0
CPT0015730003
Tumor
-1.0
CPT0017850003
Tumor
-1.0
CPT0019990003
Tumor
-1.0
CPT0006440003
Tumor
-1.0
CPT0077490003
Tumor
-1.0
CPT0012550003
Tumor
-1.0
CPT0012670003
Tumor
-1.0
CPT0092160003
Tumor
-1.1
CPT0075130003
Tumor
-1.1
CPT0002350011
Tumor
-1.1
CPT0001260009
Tumor
-1.1
CPT0069160003
Tumor
-1.1
CPT0077110003
Tumor
-1.1
CPT0012080003
Tumor
-1.1
CPT0021240003
Tumor
-1.1
CPT0065690003
Tumor
-1.1
CPT0065870003
Tumor
-1.2
CPT0065930003
Tumor
-1.2
CPT0078990003
Tumor
-1.2
CPT0025880003
Tumor
-1.2
CPT0088690003
Tumor
-1.2
CPT0092790003
Tumor
-1.2
CPT0001340003
Tumor
-1.2
CPT0071150004
Tumor
-1.2
CPT0088630003
Tumor
-1.2
CPT0025050003
Tumor
-1.2
CPT0026410003
Tumor
-1.3
CPT0079410003
Tumor
-1.3
CPT0000640003
Tumor
-1.3
CPT0086820003
Tumor
-1.3
CPT0017410003
Tumor
-1.3
CPT0081880003
Tumor
-1.3
CPT0002270011
Tumor
-1.3
CPT0019130003
Tumor
-1.3
CPT0012180003
Tumor
-1.3
CPT0001540009
Tumor
-1.3
CPT0025230003
Tumor
-1.4
CPT0085670003
Tumor
-1.4
CPT0009060003
Tumor
-1.4
CPT0012280003
Tumor
-1.4
CPT0069000003
Tumor
-1.5
CPT0023350003
Tumor
-1.5
CPT0009000003
Tumor
-1.5
CPT0088550004
Tumor
-1.5
CPT0086950003
Tumor
-1.6
CPT0014450004
Tumor
-1.7
CPT0088970003
Tumor
-1.8
CPT0025110003
Tumor
-1.8
CPT0011410003
Tumor
-2.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
