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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA4B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
74.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
70.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
70.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
66.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
65.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
58.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
56.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
55.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
54.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
44.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
43.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
43.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
42.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
40.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
37.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
37.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
37.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
36.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
36.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
32.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
32.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
31.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
31.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
31.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
31.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
30.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
28.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
27.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
24.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
24.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
23.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
23.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
23.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
22.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
21.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
21.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
20.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
20.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
19.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
19.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
18.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
18.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
18.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
17.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
16.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
15.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
14.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
13.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
13.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
13.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
13.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
13.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
13.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
6.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA4B is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
1048.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
168.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
168.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
167.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
162.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
162.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
144.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
135.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
133.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
123.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
111.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
100.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
95.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
94.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
89.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
88.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
87.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
87.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
86.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
85.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
84.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
84.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
83.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
82.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
82.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
78.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
78.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
78.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
77.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
76.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
75.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
75.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
75.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
73.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
73.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
72.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
70.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
69.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
67.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
67.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
67.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
67.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
66.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
65.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
65.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
65.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
64.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
63.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
63.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
62.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
61.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
60.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
60.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
59.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
59.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
59.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
59.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
58.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
57.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
57.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
57.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
57.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
57.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
57.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
56.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
56.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
56.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
56.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
55.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
55.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
55.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
55.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
55.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
54.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
53.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
53.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
53.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
52.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
52.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
52.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
51.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
51.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
51.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
50.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
50.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
50.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
49.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
49.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
49.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
49.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
49.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
49.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
49.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
49.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
48.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
48.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
45.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
45.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
45.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
45.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
45.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
44.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
43.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
43.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
43.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
43.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
42.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
42.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
42.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
42.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
42.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
41.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
41.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
40.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
40.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
40.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
40.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
40.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
40.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
39.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
39.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
38.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
38.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
38.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
38.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
38.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
37.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
37.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
37.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
37.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
37.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
37.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
37.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
37.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
37.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
36.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
36.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
36.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
36.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
36.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
36.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
36.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
35.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
35.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
35.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
35.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
35.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
35.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
34.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
34.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
34.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
34.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
34.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
34.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
34.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
34.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
33.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
33.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
33.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
33.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
33.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
33.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
33.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
33.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
33.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
32.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
32.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
32.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
32.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
32.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
32.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
32.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
32.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
31.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
31.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
31.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
31.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
31.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
31.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
31.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
31.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
31.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
31.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
31.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
31.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
31.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
30.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
30.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
30.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
30.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
30.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
30.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
30.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
30.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
30.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
29.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
29.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
29.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
29.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
29.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
29.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
29.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
29.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
29.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
29.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
29.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
29.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
29.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
28.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
28.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
28.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
28.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
28.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
28.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
28.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
28.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
28.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
28.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
28.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
28.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
28.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
27.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
27.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
27.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
27.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
27.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
27.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
27.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
27.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
27.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
27.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
27.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
27.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
27.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
27.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
27.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
27.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
27.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
26.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
26.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
26.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
26.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
26.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
26.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
26.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
26.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
25.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
25.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
25.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
25.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
25.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
25.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
25.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
25.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
25.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
25.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
25.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
25.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
25.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
24.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
24.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
24.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
24.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
24.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
24.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
24.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
24.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
24.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
24.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
24.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
24.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
23.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
23.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
23.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
23.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
23.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
23.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
23.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
23.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
23.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
22.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
22.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
22.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
22.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
22.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
22.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
22.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
22.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
22.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
22.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
22.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
22.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
22.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
22.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
22.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
22.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
22.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
22.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
22.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
22.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
22.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
22.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
22.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
21.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
21.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
21.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
21.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
21.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
21.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
21.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
21.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
21.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
21.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
21.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
21.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
21.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
21.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
21.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
20.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
20.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
20.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
20.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
20.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
20.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
20.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
20.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
20.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
20.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
20.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
20.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
20.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
20.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
20.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
20.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
20.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
20.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
19.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
19.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
19.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
19.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
19.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
19.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
19.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
19.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
19.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
19.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
19.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
19.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
19.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
19.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
19.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
19.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
19.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
19.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
19.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
18.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
18.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
18.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
18.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
18.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
18.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
18.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
18.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
18.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
18.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
18.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
18.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
18.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
18.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
18.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
18.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
18.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
18.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
17.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
17.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
17.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
17.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
17.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
17.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
17.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
17.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
17.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
17.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
17.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
17.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
17.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
17.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
17.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
16.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
16.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
16.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
16.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
16.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
16.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
16.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
16.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
16.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
16.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
16.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
15.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
15.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
15.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
15.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
15.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
15.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
15.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
14.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
14.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
14.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
14.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
14.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
14.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
13.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
13.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
13.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
13.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
13.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
12.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
12.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
12.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
11.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
11.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
11.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
10.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
10.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
10.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
9.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
8.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
6.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
6.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
6.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
3.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA4B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
55.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
821.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
297.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
259.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
176.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
123.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
121.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
120.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
118.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
103.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
100.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
88.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
86.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
83.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
82.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
71.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
69.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
68.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
66.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
65.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
64.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
63.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
61.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
61.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
61.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
59.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
58.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
57.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
57.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
55.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
52.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
50.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
48.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
47.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
47.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
45.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
45.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
44.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
42.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
42.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
41.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
41.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
41.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
40.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
40.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
40.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
39.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
38.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
38.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
37.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
36.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
35.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
34.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
34.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
32.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
32.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
31.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
31.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
29.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
29.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
29.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
29.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
29.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
29.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
28.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
28.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
28.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
27.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
27.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
26.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
25.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
25.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
25.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
25.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
24.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
23.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
23.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
23.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
23.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
20.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
20.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
20.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
19.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
18.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
18.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
17.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
17.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
16.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
15.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
15.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
15.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
14.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
11.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
9.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEMA4B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
268.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
197.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
190.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
189.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
184.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
155.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
124.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
122.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
117.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
103.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
103.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
103.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
97.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
94.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
93.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
92.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
85.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
84.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
83.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
82.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
70.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
67.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
66.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
63.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
63.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
63.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
63.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
62.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
60.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
58.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
56.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
54.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
53.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
52.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
52.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
51.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
51.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
51.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
51.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
49.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
49.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
49.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
48.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
47.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
46.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
46.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
45.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
45.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
45.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
45.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
44.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
43.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
43.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
43.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
43.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
42.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
42.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
41.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
41.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
40.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
40.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
40.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
40.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
39.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
39.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
39.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
38.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
38.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
37.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
37.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
37.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
37.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
37.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
37.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
36.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
36.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
36.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
36.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
35.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
35.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
35.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
35.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
35.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
34.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
34.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
33.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
33.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
33.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
33.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
32.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
32.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
31.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
31.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
31.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
31.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
31.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
30.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
30.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
30.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
29.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
29.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
28.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
28.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
28.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
28.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
28.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
28.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
28.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
28.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
28.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
28.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
27.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
27.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
27.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
27.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
27.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
26.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
26.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
26.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
26.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
26.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
26.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
26.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
26.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
26.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
25.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
25.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
25.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
25.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
25.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
25.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
25.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
25.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
24.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
24.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
24.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
24.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
24.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
24.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
24.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
23.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
23.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
23.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
23.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
23.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
22.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
22.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
22.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
22.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
22.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
22.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
22.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
22.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
21.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
21.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
21.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
21.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
21.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
21.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
21.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
20.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
20.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
20.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
20.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
20.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
20.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
19.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
19.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
19.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
18.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
18.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
17.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
17.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
17.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
17.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
17.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
17.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
16.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
16.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
16.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
15.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
15.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
15.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
14.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
14.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
14.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
14.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
13.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
13.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
13.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
13.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
13.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
13.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
12.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
12.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
12.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
12.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
11.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
11.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
11.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
11.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
10.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
10.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
10.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
10.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
10.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
8.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
8.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
7.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
7.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
7.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
6.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
6.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
5.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
5.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
4.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
3.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
3.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
3.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
1.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
1.8
CPT0084560003
Tumor
1.2
CPT0079410003
Tumor
1.2
CPT0069160003
Tumor
1.0
CPT0063630003
Tumor
0.9
CPT0001340003
Tumor
0.9
CPT0009000003
Tumor
0.8
CPT0019130003
Tumor
0.8
CPT0014450004
Tumor
0.7
CPT0001260009
Tumor
0.7
CPT0010160003
Tumor
0.7
CPT0011410003
Tumor
0.7
CPT0086030003
Tumor
0.7
CPT0088690003
Tumor
0.6
CPT0089020003
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0000640003
Tumor
0.5
CPT0064370003
Tumor
0.5
CPT0025230003
Tumor
0.5
CPT0012550003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0023350003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0079510001
Normal
0.3
CPT0078990003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0069190001
Normal
0.3
CPT0088630003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0012180003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0088640003
Normal
0.1
CPT0012640003
Normal
0.1
CPT0017450001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0069010001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0063640001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0079300001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0014350001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0084590001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0012290003
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0001180009
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0077110003
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0014370004
Tumor
-0.2
CPT0012090003
Normal
-0.2
CPT0007320003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0011240003
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0019160001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0025290003
Tumor
-0.3
CPT0006530001
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0012370003
Tumor
-0.3
CPT0064400001
Normal
-0.3
CPT0085670003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0015730003
Tumor
-0.3
CPT0000660001
Normal
-0.3
CPT0066470004
Tumor
-0.3
CPT0078840001
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0065810003
Tumor
-0.3
CPT0065870003
Tumor
-0.3
CPT0088570001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0020120003
Tumor
-0.3
CPT0086370003
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0082010001
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0012900004
Tumor
-0.4
CPT0092160003
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0078930003
Tumor
-0.4
CPT0079180003
Tumor
-0.4
CPT0021240003
Tumor
-0.4
CPT0081990003
Tumor
-0.5
CPT0017410003
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0001540009
Tumor
-0.5
CPT0002270011
Tumor
-0.5
CPT0086360003
Tumor
-0.5
CPT0078660003
Tumor
-0.6
CPT0078830003
Tumor
-0.7
CPT0075560003
Tumor
-0.7
CPT0025880003
Tumor
-0.8
CPT0086870003
Tumor
-0.8
CPT0088550004
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
