HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:112.4 nTPM
HPA Brain:55.7 nTPM
GTEx:112.4 nTPM
FANTOM5:169.6 Scaled Tags Per Million
Pig:170.4 nTPM
Mouse:359.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039903
Glial cells Medium
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 55.7
Sample id Sample description nTPM
Hippocampus
nTPM: 51.2
1898 Male, age 80, left hemisphere 67.7
2529 Female, age 94, left hemisphere 53.6
2621 Female, age 67, right hemisphere 52.5
1855 Male, age 76, left hemisphere 46.5
1911 Female, age 85, right hemisphere 45.3
2148 Female, age 91, left hemisphere 41.8
Dentate gyrus
nTPM: 45.9
2530 Female, age 94, left hemisphere 59.4
2010 Male, age 76, both hemispheres 51.0
1927 Female, age 91, both hemispheres 48.1
2246 Female, age 85, both hemispheres 41.2
2528 Male, age 74, both hemispheres 39.3
2531 Female, age 67, both hemispheres 36.3
Entorhinal gyrus
nTPM: 43.5
1938 Female, age 85, left hemisphere 52.6
1787 Male, age 76, left hemisphere 45.9
2764 Male, age 80, right hemisphere 44.3
2686 Male, age 75, right hemisphere 40.0
2117 Female, age 91, right hemisphere 39.4
2613 Female, age 94, left hemisphere 39.0
Hippocampus, CA1
nTPM: 50.4
2749 Male, age 80, left hemisphere 66.3
2527 Male, age 74, both hemispheres 52.4
1873 Female, age 85, both hemispheres 47.7
2045 Male, age 76, both hemispheres 45.1
2082 Female, age 91, right hemisphere 40.3
Hippocampus, CA2
nTPM: 51.6
1892 Male, age 76, both hemispheres 64.0
2249 Male, age 74, both hemispheres 56.7
1963 Male, age 80, left hemisphere 53.8
2437 Female, age 94, left hemisphere 49.0
1940 Female, age 85, left hemisphere 45.0
2113 Female, age 91, right hemisphere 41.2
Hippocampus, CA3
nTPM: 45.8
1867 Male, age 76, both hemispheres 57.5
2137 Male, age 80, left hemisphere 51.7
2436 Male, age 74, both hemispheres 47.3
1891 Female, age 85, both hemispheres 46.0
2861 Female, age 67, both hemispheres 38.8
2620 Female, age 94, left hemisphere 33.5
Parahippocampal cortex
nTPM: 49.1
2250 Female, age 67, right hemisphere 61.0
1850 Male, age 80, both hemispheres 60.1
1990 Female, age 91, right hemisphere 53.9
2018 Male, age 76, both hemispheres 52.4
2532 Female, age 72, left hemisphere 49.6
1933 Female, age 85, both hemispheres 48.9
2693 Female, age 94, both hemispheres 46.0
2245 Female, age 91, both hemispheres 42.9
2692 Male, age 74, both hemispheres 40.4
2622 Female, age 67, right hemisphere 35.9
Perirhinal gyrus
nTPM: 55.7
1847 Female, age 91, left hemisphere 67.8
1794 Male, age 80, right hemisphere 60.7
1841 Female, age 85, right hemisphere 59.0
2521 Female, age 94, right hemisphere 46.9
2848 Male, age 76, right hemisphere 44.3
Subiculum
nTPM: 46.6
1901 Male, age 80, both hemispheres 54.9
1977 Female, age 85, both hemispheres 52.5
2619 Male, age 74, both hemispheres 51.0
2042 Male, age 76, both hemispheres 42.9
2438 Female, age 94, left hemisphere 41.7
2729 Female, age 91, right hemisphere 36.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 112.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 112.4
Samples: 197

Max nTPM: 332.2
Min nTPM: 63.4
Std nTPM: 30.5
Median nTPM: 108.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 332.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 217.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 210.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 191.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 176.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 172.0
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 169.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 169.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 167.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 164.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 161.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 169.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 169.6
FF:10169-103B7 60 years, female 173.4
FF:10153-102I9 76 years, female 165.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 170.4
Pig sample Sample description nTPM
Subiculum
nTPM: 143.5
Samples: 4

Max nTPM: 187.9
Min nTPM: 119.9
Sample A Female 187.9
Sample B Female 139.9
Sample C Male 119.9
Sample D Male 126.2
Dorsal hippocampus
nTPM: 165.9
Samples: 4

Max nTPM: 209.5
Min nTPM: 104.8
Sample A Female 209.5
Sample B Female 155.4
Sample C Male 194.0
Sample D Male 104.8
Entorhinal cortex
nTPM: 170.4
Samples: 4

Max nTPM: 192.2
Min nTPM: 140.4
Sample A Female 184.9
Sample B Female 192.2
Sample C Male 164.0
Sample D Male 140.4
Ventral hippocampus
nTPM: 157.9
Samples: 4

Max nTPM: 175.7
Min nTPM: 126.2
Sample A Female 175.7
Sample B Female 126.2
Sample C Male 171.3
Sample D Male 158.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 359.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 314.7
Samples: 4

Max nTPM: 348.7
Min nTPM: 292.0
Sample A Male 292.0
Sample B Male 305.0
Sample C Female 348.7
Sample D Female 313.2
Hippocampal formation
nTPM: 359.6
Samples: 4

Max nTPM: 409.7
Min nTPM: 334.8
Sample A Male 409.7
Sample B Male 344.9
Sample C Female 334.8
Sample D Female 349.1

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