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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TACSTD2 is potential prognostic, high expression is favorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
151.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
122.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
106.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
91.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
75.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
72.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
71.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
71.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
67.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
52.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
31.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
31.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
29.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
28.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
27.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
24.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
20.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
19.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
16.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
13.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
12.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
11.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
10.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
10.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
8.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
8.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
6.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
6.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
6.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
5.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
4.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
3.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
3.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
3.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
3.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
2.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
1.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
1.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
1.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
1.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TACSTD2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
1235.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
832.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
731.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
630.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
611.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
543.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
538.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
509.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
458.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
327.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
289.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
245.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
209.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
167.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
129.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
125.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
116.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
89.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
84.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
82.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
82.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
68.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
68.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
68.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
59.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
53.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
53.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
51.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
48.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
47.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
46.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
45.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
45.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
43.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
43.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
42.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
42.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
41.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
41.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
41.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
40.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
39.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
38.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
37.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
36.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
36.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
35.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
34.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
34.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
33.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
33.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
32.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
32.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
32.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
32.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
31.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
31.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
31.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
30.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
30.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
30.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
30.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
30.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
29.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
28.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
28.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
28.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
27.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
27.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
27.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
27.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
26.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
26.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
25.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
24.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
24.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
24.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
23.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
23.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
23.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
23.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
23.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
22.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
22.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
22.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
21.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
21.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
21.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
20.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
20.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
19.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
18.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
18.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
18.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
17.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
17.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
17.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
17.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
17.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
17.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
16.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
16.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
16.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
15.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
15.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
15.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
14.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
14.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
13.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
13.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
13.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
12.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
12.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
12.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
12.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
12.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
12.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
12.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
12.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
11.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
10.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
10.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
10.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
9.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
9.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
9.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
9.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
9.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
9.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
9.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
9.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
9.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
8.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
8.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
8.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
8.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
8.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
8.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
8.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
8.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
7.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
7.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
7.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
7.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
7.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
7.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
7.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
7.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
7.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
7.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
6.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
6.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
6.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
6.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
6.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
6.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
6.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
6.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
6.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
6.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
6.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
6.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
6.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
6.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
5.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
5.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
5.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
5.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
5.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
5.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
5.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
5.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
5.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
5.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
5.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
5.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
5.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
5.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
5.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
5.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
5.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
5.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
5.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
5.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
5.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
5.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
5.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
5.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
5.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
5.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
5.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
5.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
5.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
5.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
5.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
5.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
5.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
5.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
5.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
5.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
4.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
4.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
4.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
4.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
4.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
4.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
4.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
4.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
4.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
4.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
4.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
4.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
4.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
4.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
4.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
4.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
4.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
4.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
4.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
4.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
4.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
4.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
4.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
4.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
4.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
4.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
4.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
4.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
4.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
4.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
4.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
4.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
4.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
4.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
4.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
4.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
4.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
4.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
4.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
4.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
4.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
4.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
4.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
3.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
3.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
3.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
3.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
3.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
3.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
3.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
3.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
3.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
3.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
3.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
3.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
3.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
3.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
3.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
3.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
3.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
3.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
3.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
3.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
3.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
3.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
3.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
3.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
3.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
3.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
3.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
3.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
3.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
3.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
3.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
3.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
3.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
3.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
3.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
3.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
3.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
3.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
3.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
3.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
3.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
3.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
3.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
3.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
3.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
3.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
3.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
3.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
3.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
3.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
3.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
3.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
3.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
3.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
3.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
3.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
3.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
3.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
3.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
3.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
3.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
2.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
2.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
2.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
2.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
2.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
2.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
2.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
2.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
2.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
2.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
2.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
2.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
2.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
2.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
2.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
2.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
2.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
2.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
2.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
2.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
2.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
2.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
2.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
2.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
2.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
2.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
2.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
2.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
2.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
2.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
2.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
2.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
2.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
2.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
2.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
2.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
2.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
2.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
2.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
2.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
2.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
2.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
2.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
2.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
2.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
2.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
2.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
2.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
2.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
2.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
2.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
2.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
2.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
2.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
2.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
2.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
2.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
2.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
2.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
2.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
2.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
2.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
2.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
2.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
2.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
2.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
2.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
2.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
2.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
2.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
2.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
2.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
2.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
2.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
2.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
1.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
1.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
1.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
1.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
1.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
1.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
1.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
1.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
1.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
1.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
1.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
1.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
1.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
1.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
1.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
1.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
1.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
1.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
1.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
1.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
1.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
1.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
1.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
1.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
1.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
1.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
1.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
1.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
1.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
1.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
1.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
1.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
1.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
1.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
1.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
1.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
1.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
1.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
1.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
1.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
1.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
1.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
1.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
1.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
1.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
1.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
1.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
1.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
1.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
0.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
0.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
0.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
0.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
0.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
0.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
0.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
0.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
0.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
0.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
0.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
0.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
0.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
0.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
0.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
0.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
0.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TACSTD2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
373.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
178.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
77.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
72.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
59.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
54.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
46.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
41.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
33.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
29.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
27.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
27.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
24.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
20.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
19.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
17.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
13.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
11.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
10.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
8.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
8.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
8.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
7.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
7.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
7.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
7.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
6.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
6.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
6.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
6.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
5.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
5.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
4.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
4.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
4.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
4.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
4.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
4.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
4.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
3.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
3.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
3.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
3.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
3.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
3.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
3.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
3.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
3.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
3.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
3.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
3.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
2.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
2.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
2.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
2.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
2.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
2.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
2.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
2.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
2.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
2.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
2.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
2.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
2.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
2.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
2.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
2.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
2.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
2.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
1.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
1.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
1.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
1.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
1.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
1.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
1.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
1.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
1.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
1.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
1.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
1.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
1.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
1.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
1.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
1.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
1.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
0.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
0.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
0.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TACSTD2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
176.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
1817.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
1412.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
1147.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
1075.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
1071.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
1054.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
994.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
952.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
924.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
905.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
887.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
879.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
871.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
810.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
744.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
669.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
650.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
644.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
630.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
584.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
581.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
575.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
571.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
528.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
521.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
510.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
478.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
439.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
434.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
429.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
428.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
421.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
419.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
417.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
411.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
410.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
410.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
394.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
394.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
393.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
389.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
386.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
386.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
370.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
369.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
369.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
356.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
354.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
314.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
313.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
309.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
306.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
302.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
301.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
290.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
286.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
281.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
273.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
269.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
267.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
263.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
263.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
261.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
258.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
250.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
247.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
245.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
234.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
232.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
225.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
218.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
215.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
215.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
204.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
199.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
198.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
196.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
194.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
193.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
190.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
189.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
186.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
185.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
185.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
184.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
182.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
181.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
178.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
172.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
171.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
171.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
170.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
170.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
169.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
166.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
163.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
162.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
155.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
154.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
152.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
151.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
150.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
149.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
146.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
144.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
144.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
142.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
134.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
131.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
129.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
127.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
124.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
124.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
123.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
122.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
122.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
120.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
119.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
118.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
114.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
111.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
107.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
107.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
106.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
104.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
101.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
100.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
98.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
97.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
93.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
92.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
91.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
90.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
90.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
86.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
85.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
83.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
83.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
82.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
80.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
79.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
77.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
76.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
76.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
74.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
73.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
71.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
70.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
70.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
69.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
68.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
68.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
67.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
65.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
65.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
63.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
59.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
58.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
57.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
57.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
54.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
51.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
43.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
43.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
42.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
41.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
40.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
40.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
40.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
39.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
38.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
38.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
37.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
37.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
34.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
34.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
34.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
32.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
31.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
30.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
29.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
28.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
28.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
26.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
25.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
24.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
22.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
22.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
21.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
21.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
18.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
16.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
16.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
15.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
15.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
14.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
13.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
12.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
10.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
10.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
7.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
7.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
7.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
6.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
5.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
5.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
5.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
4.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
4.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
4.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
3.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
3.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
3.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
2.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
2.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
2.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
2.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
2.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
2.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
2.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
2.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
2.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
2.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
1.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
1.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
1.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
1.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
1.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
1.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
1.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
1.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
1.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
1.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
1.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
1.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
1.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
1.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
1.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
0.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
0.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
0.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
0.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
0.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
0.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
0.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
0.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079510001
Normal
2.1
CPT0069190001
Normal
1.8
CPT0079300001
Normal
1.6
CPT0012640003
Normal
1.5
CPT0001510001
Normal
1.4
CPT0001230001
Normal
1.2
CPT0025920001
Normal
1.2
CPT0009020003
Normal
1.2
CPT0001550001
Normal
1.2
CPT0066520001
Normal
1.0
CPT0088640003
Normal
1.0
CPT0020020001
Normal
1.0
CPT0010120001
Normal
1.0
CPT0088500001
Normal
0.9
CPT0092190003
Normal
0.9
CPT0063330001
Normal
0.9
CPT0007870001
Normal
0.9
CPT0069010001
Normal
0.8
CPT0019160001
Normal
0.8
CPT0002370001
Normal
0.8
CPT0075170001
Normal
0.7
CPT0012920003
Normal
0.7
CPT0089040001
Normal
0.7
CPT0078660003
Tumor
0.7
CPT0087040003
Tumor
0.7
CPT0001220008
Tumor
0.7
CPT0020130001
Normal
0.7
CPT0077140001
Normal
0.7
CPT0077500001
Normal
0.6
CPT0086890003
Normal
0.6
CPT0078940001
Normal
0.6
CPT0064400001
Normal
0.6
CPT0012290003
Normal
0.6
CPT0017450001
Normal
0.5
CPT0063640001
Normal
0.5
CPT0084590001
Normal
0.5
CPT0012570003
Normal
0.5
CPT0082010001
Normal
0.5
CPT0078800003
Tumor
0.5
CPT0078670001
Normal
0.5
CPT0024680001
Normal
0.4
CPT0065820001
Normal
0.4
CPT0018250001
Normal
0.4
CPT0088710001
Normal
0.4
CPT0000890001
Normal
0.4
CPT0077320001
Normal
0.4
CPT0092310003
Normal
0.4
CPT0025580004
Tumor
0.4
CPT0010170001
Normal
0.4
CPT0017850003
Tumor
0.4
CPT0007470001
Normal
0.4
CPT0000790001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0086970003
Normal
0.3
CPT0001190001
Normal
0.3
CPT0000660001
Normal
0.3
CPT0001180009
Tumor
0.3
CPT0065450001
Normal
0.3
CPT0086830003
Normal
0.3
CPT0081620001
Normal
0.3
CPT0075570001
Normal
0.3
CPT0079430001
Normal
0.3
CPT0009080003
Normal
0.3
CPT0012090003
Normal
0.3
CPT0006530001
Normal
0.3
CPT0088570001
Normal
0.2
CPT0025050003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0014470001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0078530001
Normal
0.2
CPT0026420001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0012770003
Normal
0.1
CPT0076350001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0002350011
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0092800003
Normal
0.0
CPT0078840001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0066430001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0001270001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0014160003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0092740003
Normal
-0.4
CPT0020120003
Tumor
-0.5
CPT0069000003
Tumor
-0.5
CPT0089460004
Tumor
-0.5
CPT0014450004
Tumor
-0.6
CPT0063320003
Tumor
-0.6
CPT0066480003
Tumor
-0.6
CPT0078510003
Tumor
-0.6
CPT0078930003
Tumor
-0.7
CPT0025170003
Tumor
-0.7
CPT0086870003
Tumor
-0.8
CPT0065750003
Tumor
-0.8
CPT0092290003
Tumor
-0.8
CPT0063630003
Tumor
-0.8
CPT0088760003
Tumor
-0.8
CPT0001500009
Tumor
-0.8
CPT0000640003
Tumor
-0.9
CPT0075720003
Tumor
-0.9
CPT0000870016
Tumor
-0.9
CPT0017410003
Tumor
-0.9
CPT0065870003
Tumor
-0.9
CPT0012080003
Tumor
-0.9
CPT0092790003
Tumor
-0.9
CPT0009000003
Tumor
-1.0
CPT0081990003
Tumor
-1.0
CPT0088690003
Tumor
-1.0
CPT0010160003
Tumor
-1.0
CPT0011240003
Tumor
-1.0
CPT0021240003
Tumor
-1.0
CPT0012670003
Tumor
-1.1
CPT0006900003
Tumor
-1.1
CPT0092160003
Tumor
-1.1
CPT0069160003
Tumor
-1.1
CPT0014370004
Tumor
-1.1
CPT0012900004
Tumor
-1.1
CPT0077490003
Tumor
-1.1
CPT0064370003
Tumor
-1.1
CPT0066470004
Tumor
-1.1
CPT0092730003
Tumor
-1.1
CPT0011410003
Tumor
-1.2
CPT0009060003
Tumor
-1.2
CPT0084560003
Tumor
-1.2
CPT0079180003
Tumor
-1.2
CPT0088630003
Tumor
-1.2
CPT0088900003
Tumor
-1.2
CPT0006630003
Tumor
-1.2
CPT0086820003
Tumor
-1.2
CPT0078830003
Tumor
-1.3
CPT0012280003
Tumor
-1.3
CPT0007320003
Tumor
-1.3
CPT0075560003
Tumor
-1.3
CPT0086360003
Tumor
-1.4
CPT0088970003
Tumor
-1.4
CPT0000780007
Tumor
-1.4
CPT0007860003
Tumor
-1.4
CPT0012550003
Tumor
-1.4
CPT0019990003
Tumor
-1.4
CPT0065810003
Tumor
-1.4
CPT0076330003
Tumor
-1.4
CPT0071150004
Tumor
-1.5
CPT0081600003
Tumor
-1.5
CPT0012180003
Tumor
-1.5
CPT0024670003
Tumor
-1.5
CPT0001540009
Tumor
-1.6
CPT0025880003
Tumor
-1.6
CPT0079480003
Tumor
-1.6
CPT0075130003
Tumor
-1.7
CPT0065430003
Tumor
-1.7
CPT0002270011
Tumor
-1.7
CPT0010110003
Tumor
-1.7
CPT0088550004
Tumor
-1.7
CPT0012370003
Tumor
-1.8
CPT0078990003
Tumor
-1.8
CPT0079270003
Tumor
-1.8
CPT0015810003
Tumor
-1.8
CPT0001340003
Tumor
-1.8
CPT0088480003
Tumor
-1.8
CPT0086030003
Tumor
-1.9
CPT0001260009
Tumor
-1.9
CPT0079230003
Tumor
-1.9
CPT0006440003
Tumor
-1.9
CPT0079410003
Tumor
-1.9
CPT0085670003
Tumor
-1.9
CPT0065930003
Tumor
-2.0
CPT0079380003
Tumor
-2.1
CPT0025290003
Tumor
-2.1
CPT0023350003
Tumor
-2.1
CPT0026410003
Tumor
-2.1
CPT0015730003
Tumor
-2.2
CPT0025110003
Tumor
-2.4
CPT0077110003
Tumor
-2.4
CPT0025350003
Tumor
-2.4
CPT0065690003
Tumor
-2.6
CPT0081880003
Tumor
-2.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.