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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TM2D3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
58.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
52.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
51.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
49.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
49.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
48.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
45.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
45.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
44.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
44.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
44.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
41.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
41.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
40.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
39.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
39.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
39.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
38.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
37.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
37.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
37.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
37.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
36.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
35.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
35.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
35.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
34.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
34.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
34.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
34.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
33.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
33.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
32.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
32.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
31.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
31.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
31.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
28.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
28.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
28.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
27.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
27.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
25.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
25.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
25.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
25.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
24.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
23.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
23.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
22.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
22.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
21.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
21.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
21.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
17.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
16.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
16.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
16.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
15.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
14.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
14.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
13.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TM2D3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
186.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
97.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
91.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
88.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
82.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
81.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
77.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
76.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
76.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
74.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
73.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
72.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
70.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
70.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
69.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
68.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
67.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
66.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
65.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
65.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
63.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
63.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
61.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
61.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
60.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
60.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
60.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
59.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
57.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
57.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
57.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
57.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
56.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
56.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
55.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
55.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
55.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
55.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
55.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
54.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
54.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
54.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
54.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
54.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
53.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
53.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
53.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
53.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
53.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
53.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
53.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
53.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
53.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
52.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
52.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
52.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
52.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
52.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
51.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
51.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
51.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
51.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
51.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
51.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
51.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
51.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
50.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
50.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
50.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
50.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
50.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
50.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
50.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
50.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
50.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
49.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
49.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
49.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
49.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
49.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
49.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
49.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
49.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
49.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
49.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
49.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
49.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
48.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
48.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
48.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
48.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
48.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
48.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
48.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
48.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
48.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
48.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
48.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
48.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
48.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
47.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
47.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
47.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
47.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
47.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
47.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
47.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
47.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
47.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
47.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
47.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
47.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
47.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
47.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
47.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
47.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
47.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
46.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
46.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
46.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
46.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
46.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
46.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
46.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
46.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
46.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
46.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
46.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
46.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
45.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
45.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
45.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
45.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
45.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
45.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
45.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
44.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
44.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
44.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
44.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
44.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
44.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
44.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
44.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
44.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
44.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
44.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
44.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
44.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
44.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
43.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
43.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
43.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
43.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
43.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
43.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
43.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
43.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
43.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
43.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
43.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
43.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
43.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
43.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
43.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
43.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
43.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
43.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
42.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
42.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
42.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
42.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
42.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
42.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
42.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
42.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
42.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
42.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
41.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
41.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
41.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
41.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
41.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
41.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
41.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
41.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
41.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
41.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
41.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
41.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
41.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
41.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
41.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
41.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
41.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
41.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
41.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
41.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
41.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
40.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
40.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
40.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
40.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
40.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
40.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
40.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
40.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
40.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
40.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
40.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
40.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
40.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
40.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
40.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
40.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
39.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
39.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
39.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
39.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
39.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
39.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
39.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
39.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
39.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
39.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
39.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
39.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
39.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
39.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
39.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
39.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
38.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
38.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
38.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
38.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
38.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
38.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
38.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
38.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
38.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
38.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
38.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
38.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
38.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
37.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
37.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
37.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
37.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
37.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
37.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
37.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
37.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
37.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
37.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
37.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
37.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
37.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
37.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
36.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
36.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
36.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
36.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
36.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
36.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
36.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
36.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
36.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
36.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
36.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
36.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
36.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
36.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
36.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
36.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
36.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
36.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
36.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
36.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
36.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
36.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
36.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
35.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
35.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
35.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
35.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
35.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
35.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
35.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
35.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
35.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
35.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
35.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
35.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
35.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
35.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
35.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
35.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
35.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
35.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
35.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
35.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
34.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
34.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
34.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
34.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
34.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
34.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
34.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
34.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
34.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
33.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
33.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
33.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
33.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
33.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
33.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
33.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
33.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
33.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
33.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
33.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
33.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
33.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
33.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
33.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
32.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
32.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
32.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
32.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
32.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
32.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
32.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
32.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
32.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
32.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
32.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
32.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
32.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
32.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
32.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
31.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
31.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
31.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
31.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
31.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
31.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
31.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
31.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
31.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
31.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
31.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
31.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
31.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
31.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
31.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
31.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
31.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
31.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
30.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
30.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
30.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
30.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
30.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
30.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
30.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
30.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
30.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
30.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
29.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
29.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
29.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
29.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
29.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
29.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
29.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
29.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
29.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
29.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
29.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
29.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
29.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
29.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
28.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
28.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
28.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
28.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
28.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
28.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
28.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
28.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
28.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
28.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
28.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
28.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
28.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
28.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
28.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
28.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
28.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
28.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
28.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
28.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
28.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
28.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
28.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
27.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
27.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
27.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
27.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
27.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
27.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
27.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
27.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
27.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
27.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
27.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
27.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
27.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
27.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
26.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
26.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
26.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
26.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
26.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
26.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
25.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
25.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
25.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
25.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
25.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
25.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
25.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
25.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
25.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
25.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
24.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
24.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
24.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
24.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
24.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
24.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
24.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
24.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
24.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
23.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
23.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
23.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
23.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
23.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
23.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
23.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
23.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
23.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
23.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
23.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
23.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
23.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
22.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
22.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
22.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
22.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
22.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
21.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
21.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
21.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
21.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
21.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
21.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
21.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
20.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
20.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
20.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
20.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
19.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
19.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
19.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
19.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
19.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
19.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
19.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
19.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
19.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
18.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
18.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
18.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
18.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
18.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
18.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
17.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
17.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
17.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
17.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
17.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
17.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
17.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
17.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
17.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
16.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
16.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
15.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
14.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
13.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
12.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TM2D3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
99.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
79.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
76.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
73.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
68.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
68.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
65.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
64.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
64.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
64.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
63.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
62.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
62.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
62.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
60.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
60.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
59.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
59.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
58.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
58.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
56.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
55.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
55.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
54.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
54.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
54.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
54.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
53.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
52.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
51.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
50.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
50.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
50.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
49.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
48.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
48.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
48.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
48.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
48.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
47.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
47.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
47.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
46.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
46.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
45.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
44.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
44.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
44.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
44.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
44.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
44.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
43.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
43.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
43.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
42.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
42.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
42.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
42.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
41.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
41.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
41.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
40.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
39.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
39.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
39.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
39.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
39.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
39.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
38.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
38.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
38.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
38.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
37.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
36.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
36.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
35.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
35.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
35.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
35.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
35.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
34.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
34.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
33.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
33.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
33.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
31.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
31.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
30.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
30.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
28.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
27.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
24.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
23.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
23.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
17.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TM2D3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
71.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
57.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
50.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
45.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
45.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
45.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
44.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
44.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
43.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
43.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
42.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
41.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
40.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
40.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
39.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
39.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
39.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
39.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
38.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
38.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
37.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
36.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
36.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
36.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
35.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
35.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
35.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
35.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
34.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
34.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
34.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
34.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
34.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
34.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
33.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
33.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
33.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
33.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
33.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
32.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
32.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
32.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
32.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
32.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
32.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
31.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
31.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
30.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
30.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
30.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
30.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
29.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
29.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
29.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
29.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
29.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
29.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
29.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
29.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
29.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
29.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
29.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
28.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
28.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
28.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
28.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
28.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
28.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
27.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
27.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
27.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
27.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
27.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
27.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
27.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
27.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
27.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
27.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
27.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
27.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
26.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
26.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
26.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
26.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
26.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
26.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
26.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
26.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
26.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
26.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
26.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
26.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
26.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
26.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
26.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
26.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
25.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
25.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
25.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
25.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
25.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
25.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
25.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
25.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
25.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
25.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
24.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
24.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
24.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
24.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
24.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
24.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
24.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
24.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
24.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
24.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
24.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
24.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
23.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
23.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
23.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
23.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
23.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
23.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
23.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
23.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
23.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
23.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
22.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
22.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
22.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
22.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
22.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
22.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
22.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
22.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
22.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
22.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
22.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
21.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
21.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
21.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
21.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
21.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
21.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
21.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
21.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
21.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
21.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
21.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
20.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
20.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
20.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
20.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
20.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
20.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
20.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
20.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
20.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
20.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
20.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
20.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
20.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
20.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
20.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
20.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
20.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
20.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
19.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
19.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
19.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
19.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
19.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
19.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
19.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
19.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
19.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
19.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
19.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
19.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
18.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
18.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
18.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
18.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
18.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
18.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
18.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
18.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
18.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
18.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
18.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
18.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
18.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
17.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
17.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
17.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
17.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
17.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
17.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
17.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
17.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
17.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
16.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
16.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
16.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
16.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
16.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
16.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
16.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
16.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
15.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
15.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
15.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
15.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
15.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
15.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
15.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
15.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
15.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
14.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
14.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
14.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
14.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
14.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
14.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
14.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
13.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
13.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
13.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
13.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
12.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
12.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
12.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
12.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
11.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
11.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
11.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
10.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
10.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
10.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
10.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
9.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
9.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
9.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
8.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
6.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
5.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
4.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
3.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
3.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088480003
Tumor
3.5
CPT0079180003
Tumor
3.0
CPT0078660003
Tumor
1.6
CPT0024680001
Normal
1.5
CPT0079510001
Normal
1.3
CPT0011240003
Tumor
1.0
CPT0012550003
Tumor
0.9
CPT0077110003
Tumor
0.7
CPT0092160003
Tumor
0.6
CPT0079270003
Tumor
0.6
CPT0088550004
Tumor
0.6
CPT0014450004
Tumor
0.6
CPT0065450001
Normal
0.6
CPT0078800003
Tumor
0.6
CPT0001350001
Normal
0.5
CPT0025350003
Tumor
0.5
CPT0006950001
Normal
0.5
CPT0088900003
Tumor
0.5
CPT0092740003
Normal
0.5
CPT0078830003
Tumor
0.5
CPT0088780001
Normal
0.4
CPT0088760003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0078530001
Normal
0.4
CPT0025110003
Tumor
0.4
CPT0075720003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0088500001
Normal
0.3
CPT0081880003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0010170001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0014370004
Tumor
0.3
CPT0007870001
Normal
0.3
CPT0076330003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0079300001
Normal
0.2
CPT0065930003
Tumor
0.2
CPT0079000001
Normal
0.2
CPT0086950003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0088920001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0001260009
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0023710001
Normal
0.2
CPT0025290003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0001510001
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0001540009
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0000790001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0065690003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0020130001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0020120003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0012280003
Tumor
-0.2
CPT0017850003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0019160001
Normal
-0.2
CPT0023690003
Tumor
-0.3
CPT0077500001
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0000780007
Tumor
-0.3
CPT0018250001
Normal
-0.3
CPT0002350011
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0015730003
Tumor
-0.4
CPT0012570003
Normal
-0.4
CPT0086030003
Tumor
-0.4
CPT0001550001
Normal
-0.4
CPT0012640003
Normal
-0.4
CPT0081600003
Tumor
-0.4
CPT0012090003
Normal
-0.4
CPT0077490003
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0066480003
Tumor
-0.5
CPT0012770003
Normal
-0.6
CPT0006900003
Tumor
-0.8
CPT0024670003
Tumor
-0.8
CPT0006630003
Tumor
-0.9
CPT0012370003
Tumor
-0.9
CPT0069160003
Tumor
-1.0
CPT0026410003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0084590001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0020020001
Normal
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0006530001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
