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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TM2D3 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
145.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
78.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
71.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
63.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
57.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
56.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
55.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
55.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
55.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
54.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
54.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
53.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
53.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
53.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
50.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
48.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
48.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
48.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
48.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
47.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
47.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
46.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
45.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
45.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
45.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
44.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
44.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
44.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
43.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
42.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
42.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
42.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
42.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
42.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
42.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
41.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
41.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
41.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
41.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
39.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
39.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
39.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
39.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
39.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
39.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
39.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
38.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
38.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
38.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
38.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
37.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
37.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
37.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
37.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
37.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
37.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
37.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
37.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
37.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
37.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
37.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
36.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
36.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
36.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
36.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
36.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
35.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
35.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
35.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
35.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
35.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
35.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
35.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
35.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
35.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
35.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
35.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
35.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
34.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
34.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
34.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
34.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
34.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
34.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
34.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
33.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
33.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
33.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
33.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
33.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
33.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
33.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
33.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
33.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
33.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
32.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
32.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
32.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
32.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
32.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
32.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
32.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
32.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
32.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
32.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
31.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
31.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
31.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
31.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
31.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
31.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
31.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
31.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
31.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
31.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
31.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
31.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
31.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
31.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
30.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
30.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
30.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
30.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
30.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
30.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
30.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
30.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
30.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
30.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
30.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
30.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
30.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
30.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
29.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
29.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
29.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
29.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
29.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
29.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
29.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
29.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
29.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
29.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
29.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
29.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
29.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
28.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
28.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
28.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
28.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
28.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
28.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
28.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
28.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
28.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
28.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
28.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
28.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
27.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
27.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
27.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
27.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
27.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
27.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
27.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
27.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
27.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
27.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
27.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
27.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
26.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
26.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
26.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
26.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
26.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
26.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
26.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
26.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
26.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
25.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
25.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
25.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
25.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
25.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
25.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
25.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
25.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
25.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
25.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
25.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
25.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
25.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
25.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
25.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
25.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
25.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
25.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
25.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
25.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
25.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
25.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
25.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
24.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
24.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
24.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
24.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
24.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
24.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
24.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
24.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
24.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
24.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
24.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
24.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
24.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
24.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
23.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
23.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
23.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
23.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
23.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
23.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
23.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
23.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
23.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
23.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
23.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
23.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
23.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
23.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
23.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
22.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
22.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
22.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
22.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
22.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
22.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
22.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
22.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
22.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
22.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
22.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
22.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
22.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
22.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
22.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
21.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
21.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
21.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
21.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
21.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
21.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
21.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
21.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
21.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
21.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
21.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
21.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
20.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
20.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
20.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
20.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
20.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
20.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
20.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
20.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
20.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
20.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
20.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
20.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
20.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
19.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
19.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
19.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
19.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
19.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
19.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
19.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
19.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
19.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
19.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
19.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
19.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
18.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
18.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
18.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
18.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
18.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
18.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
18.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
18.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
18.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
18.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
18.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
17.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
17.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
17.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
17.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
17.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
17.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
17.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
17.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
17.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
17.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
17.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
16.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
16.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
16.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
16.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
16.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
16.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
16.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
16.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
16.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
15.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
15.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
15.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
15.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
15.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
15.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
15.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
15.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
15.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
14.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
14.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
14.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
14.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
14.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
14.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
14.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
14.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
14.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
14.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
14.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
13.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
13.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
13.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
13.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
13.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
13.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
13.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
13.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
13.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
12.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
12.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
12.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
12.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
11.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
11.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
11.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
10.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
10.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
10.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
10.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
9.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
9.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
9.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
8.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
8.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
8.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
7.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TM2D3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.7
Number of samples
231
Samples
Sample
Description
TPM
DO45119
0 years, male, NA, stage:3, dead, 510 days
58.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
58.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
56.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
55.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
52.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
48.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
48.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
47.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
47.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
47.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
47.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
46.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
44.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
44.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
44.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
44.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
43.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
43.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
43.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
43.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
43.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
42.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
42.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
42.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
42.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
41.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
41.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
41.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
40.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
40.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
39.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
39.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
39.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
38.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
38.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
38.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
37.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
37.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
37.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
37.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
37.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
37.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
37.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
36.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
36.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
36.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
36.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
36.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
36.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
35.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
35.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
35.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
35.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
34.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
34.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
34.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
34.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
34.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
34.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
34.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
33.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
33.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
33.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
33.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
33.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
33.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
33.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
33.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
32.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
32.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
32.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
32.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
31.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
31.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
31.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
31.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
31.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
31.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
31.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
31.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
30.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
30.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
30.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
30.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
30.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
30.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
30.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
30.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
30.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
30.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
30.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
30.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
30.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
29.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
29.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
29.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
29.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
29.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
29.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
29.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
29.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
29.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
28.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
28.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
28.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
28.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
28.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
27.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
27.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
27.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
27.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
27.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
27.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
27.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
27.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
27.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
27.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
27.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
27.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
27.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
26.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
26.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
26.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
26.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
26.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
26.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
25.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
25.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
25.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
25.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
25.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
25.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
25.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
25.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
25.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
25.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
25.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
25.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
25.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
25.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
25.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
25.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
25.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
25.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
25.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
24.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
24.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
24.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
24.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
24.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
24.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
24.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
24.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
24.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
24.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
24.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
24.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
24.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
23.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
23.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
23.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
23.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
23.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
23.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
23.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
22.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
22.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
22.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
22.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
22.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
22.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
22.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
22.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
22.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
21.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
21.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
21.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
21.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
21.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
21.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
21.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
21.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
21.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
21.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
21.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
20.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
20.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
20.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
20.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
20.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
20.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
20.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
20.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
19.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
19.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
19.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
19.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
19.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
18.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
18.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
18.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
18.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
18.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
18.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
18.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
18.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
18.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
17.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
17.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
17.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
17.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
17.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
17.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
17.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
16.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
16.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
15.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
15.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
15.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
15.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
15.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
14.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
14.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
14.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
13.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
13.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
13.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
12.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
12.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
9.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
8.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
314
Normal
1.5
332
Normal
1.5
331
Tumor
1.5
191
Tumor
1.2
277
Tumor
1.2
278
Normal
1.2
192
Normal
1.1
222
Normal
1.1
571
Tumor
1.1
312
Normal
1.1
218
Normal
1.1
298
Normal
1.0
744
Normal
1.0
568
Normal
1.0
672
Normal
1.0
367
Tumor
0.9
368
Normal
0.9
217
Tumor
0.9
196
Normal
0.9
574
Normal
0.9
648
Normal
0.9
366
Normal
0.9
257
Tumor
0.9
214
Normal
0.9
666
Normal
0.9
313
Tumor
0.9
564
Normal
0.8
661
Tumor
0.8
432
Normal
0.8
376
Normal
0.8
221
Tumor
0.8
195
Tumor
0.8
297
Tumor
0.8
213
Tumor
0.8
743
Tumor
0.8
361
Tumor
0.8
384
Normal
0.7
662
Normal
0.7
383
Tumor
0.7
434
Normal
0.7
362
Normal
0.7
665
Tumor
0.7
444
Normal
0.7
392
Normal
0.6
664
Normal
0.6
446
Normal
0.6
563
Tumor
0.6
394
Normal
0.6
741
Tumor
0.6
567
Tumor
0.6
671
Tumor
0.5
388
Normal
0.5
258
Normal
0.5
431
Tumor
0.5
951
Tumor
0.5
365
Tumor
0.5
435
Tumor
0.5
396
Normal
0.5
268
Normal
0.5
231
Tumor
0.5
953
Tumor
0.5
391
Tumor
0.5
954
Normal
0.5
863
Tumor
0.5
271
Tumor
0.4
572
Normal
0.4
938
Normal
0.4
393
Tumor
0.4
483
Tumor
0.4
436
Normal
0.4
261
Tumor
0.4
487
Tumor
0.4
445
Tumor
0.4
965
Tumor
0.4
573
Tumor
0.4
498
Normal
0.4
443
Tumor
0.4
386
Normal
0.3
861
Tumor
0.3
272
Normal
0.3
663
Tumor
0.3
742
Normal
0.3
484
Normal
0.3
862
Normal
0.3
262
Normal
0.3
433
Tumor
0.3
558
Normal
0.3
232
Normal
0.3
944
Normal
0.3
267
Tumor
0.3
647
Tumor
0.2
491
Tumor
0.2
937
Tumor
0.2
868
Normal
0.2
497
Tumor
0.2
874
Normal
0.2
492
Normal
0.2
488
Normal
0.2
866
Normal
0.1
311
Tumor
0.1
873
Tumor
0.1
387
Tumor
0.1
864
Normal
0.1
738
Normal
0.1
975
Tumor
0.1
925
Tumor
0.1
723
Tumor
0.1
956
Normal
0.1
966
Normal
0.1
494
Normal
0.0
493
Tumor
0.0
955
Tumor
0.0
728
Normal
0.0
867
Tumor
-0.1
923
Tumor
-0.1
943
Tumor
-0.1
375
Tumor
-0.1
952
Normal
-0.1
967
Tumor
-0.1
724
Normal
-0.1
921
Tumor
-0.1
915
Tumor
-0.2
963
Tumor
-0.2
976
Normal
-0.2
957
Tumor
-0.2
557
Tumor
-0.2
385
Tumor
-0.2
395
Tumor
-0.3
727
Tumor
-0.3
737
Tumor
-0.4
865
Tumor
-0.4
968
Normal
-0.5
964
Normal
-0.5
918
Normal
-0.6
924
Normal
-0.6
917
Tumor
-0.7
958
Normal
-0.8
922
Normal
-0.9
926
Normal
-0.9
916
Normal
-1.1
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
481
Tumor
N/A
482
Normal
N/A
363
Tumor
N/A
364
Normal
N/A
123
Tumor
N/A
124
Normal
N/A
125
Tumor
N/A
126
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
131
Tumor
N/A
132
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
137
Tumor
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
817
Tumor
N/A
818
Normal
N/A
141
Tumor
N/A
142
Normal
N/A
145
Tumor
N/A
146
Normal
N/A
147
Tumor
N/A
148
Normal
N/A
823
Tumor
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
1016
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
1013
Tumor
N/A
713
Tumor
N/A
714
Normal
N/A
715
Tumor
N/A
716
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
722
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
858
Normal
N/A
617
Tumor
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
982
Normal
N/A
983
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
1045
Tumor
N/A
745
Tumor
N/A
746
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
527
Tumor
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
421
Tumor
N/A
422
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
553
Tumor
N/A
554
Normal
N/A
685
Tumor
N/A
686
Normal
N/A
447
Tumor
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
451
Tumor
N/A
452
Normal
N/A
211
Tumor
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
455
Tumor
N/A
697
Tumor
N/A
456
Normal
N/A
698
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
342
Normal
N/A
463
Tumor
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
